Clone Name | rbastl21e01 |
---|---|
Clone Library Name | barley_pub |
>gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosome 9, complete sequence Length = 166272 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 101 taatacaatgtgtagattatgt 122 |||||||||||||||||||||| Sbjct: 144108 taatacaatgtgtagattatgt 144129
>gb|AC153012.4| Mus musculus BAC clone RP23-302F19 from chromosome 9, complete sequence Length = 196764 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 101 taatacaatgtgtagattatgt 122 |||||||||||||||||||||| Sbjct: 112873 taatacaatgtgtagattatgt 112894
>gb|AC145789.2| Xenopus tropicalis clone CH216-127D2, complete sequence Length = 153054 Score = 42.1 bits (21), Expect = 0.98 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 atattgtaatacaatgtaaag 69 ||||||||||||||||||||| Sbjct: 23362 atattgtaatacaatgtaaag 23342
>gb|AC113483.7| Mus musculus chromosome 1, clone RP23-343E12, complete sequence Length = 207188 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 aattgttggcctcatcaaca 184 |||||||||||||||||||| Sbjct: 114580 aattgttggcctcatcaaca 114561
>emb|AL590378.5| Human DNA sequence from clone RP11-49L2 on chromosome 10 Contains a novel gene and a novel MAM domain containing protein, complete sequence Length = 150889 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gttaatgtgtatattgtaat 58 |||||||||||||||||||| Sbjct: 111609 gttaatgtgtatattgtaat 111590
>gb|AC078829.10| Oryza sativa chromosome 10 BAC OSJNBa0026O12 genomic sequence, complete sequence Length = 163279 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 atcaacagaccaaaaaattt 149 |||||||||||||||||||| Sbjct: 34149 atcaacagaccaaaaaattt 34130
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcaacagaccaaaaaattt 149 |||||||||||||||||||| Sbjct: 17338130 atcaacagaccaaaaaattt 17338149
>dbj|BS000151.1| Pan troglodytes chromosome 22 clone:PTF22-022C02, map 22, complete sequences Length = 34681 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gttaatgtgtatattgtaat 58 |||||||||||||||||||| Sbjct: 16188 gttaatgtgtatattgtaat 16169
>dbj|BS000145.1| Pan troglodytes chromosome 22 clone:PTF22-034P13, map 22, complete sequences Length = 33043 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gttaatgtgtatattgtaat 58 |||||||||||||||||||| Sbjct: 14050 gttaatgtgtatattgtaat 14031
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 atcaacagaccaaaaaattt 149 |||||||||||||||||||| Sbjct: 17347170 atcaacagaccaaaaaattt 17347189
>dbj|AP005270.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-291B19, complete sequence Length = 200493 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ttcagatcaatatgttcaat 20 |||||||||||||||||||| Sbjct: 145358 ttcagatcaatatgttcaat 145339 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,204,561 Number of Sequences: 3902068 Number of extensions: 3204561 Number of successful extensions: 65110 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65048 Number of HSP's gapped (non-prelim): 62 length of query: 295 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 273 effective length of database: 17,147,199,772 effective search space: 4681185537756 effective search space used: 4681185537756 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)