Clone Name | rbastl21c11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PELI_DROME (O77237) Protein pellino | 30 | 1.6 | 2 | CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor... | 28 | 4.5 | 3 | YIHP_ECOLI (P32137) Inner membrane symporter yihP | 28 | 7.7 |
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>PELI_DROME (O77237) Protein pellino| Length = 424 Score = 30.0 bits (66), Expect = 1.6 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 10/47 (21%) Frame = -3 Query: 217 YVVVGSAAFTFNPSGHL---------CNV-IPVSFFGCQAYVSFCAS 107 YV VG+ + FNP GH+ NV IP G QA FCA+ Sbjct: 360 YVDVGAPTYAFNPCGHMATEKTVKYWANVEIPHGTNGFQAVCPFCAT 406
>CELR1_HUMAN (Q9NYQ6) Cadherin EGF LAG seven-pass G-type receptor 1 precursor| (Flamingo homolog 2) (hFmi2) Length = 3014 Score = 28.5 bits (62), Expect = 4.5 Identities = 18/39 (46%), Positives = 22/39 (56%) Frame = -3 Query: 265 HVRHRFLFVTLFLSQLYVVVGSAAFTFNPSGHLCNVIPV 149 H H+ L V LFLSQL V+G T NP LC V+ + Sbjct: 2501 HSIHKHLAVALFLSQLVFVIGINQ-TENP--FLCTVVAI 2536
>YIHP_ECOLI (P32137) Inner membrane symporter yihP| Length = 461 Score = 27.7 bits (60), Expect = 7.7 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 12/73 (16%) Frame = -2 Query: 188 IQPFRASMQRHPCFLFWMSSLCII------LCIDIFFVRYVVR-AI*M*YRKFFGR---- 42 +Q FRA P F+ +++LC + L I +++ +YV+ I + Y FF Sbjct: 232 LQSFRAIAGNRPLFILCIANLCTLGAFNVKLAIQVYYTQYVLNDPILLSYMGFFSMGCIF 291 Query: 41 -FLFTEPANDRFF 6 +F PA+ R F Sbjct: 292 IGVFLMPASVRRF 304 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,158,046 Number of Sequences: 219361 Number of extensions: 912609 Number of successful extensions: 3289 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2705 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3285 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)