ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl21c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12) 107 1e-23
2LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12) 89 4e-18
3LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygena... 80 1e-15
4LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase... 77 9e-15
5LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12) 66 2e-11
6LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12) 55 3e-08
7LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94) 54 1e-07
8LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12) 53 2e-07
9LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12) 52 3e-07
10LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12) 52 4e-07
11LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1) 50 1e-06
12LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2) 49 2e-06
13LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12) 49 3e-06
14LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12) 48 7e-06
15LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3) 47 1e-05
16LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12) 46 2e-05
17LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12) 45 5e-05
18LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment) 45 6e-05
19LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12) 43 2e-04
20LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC... 39 0.003
21LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur... 39 0.003
22LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC... 38 0.006
23LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1... 38 0.007
24LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12) 37 0.013
25LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12) 35 0.037
26LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC... 33 0.18
27LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13... 31 0.70
28CAD16_MOUSE (O88338) Cadherin-16 precursor (Kidney-specific cadh... 28 4.5
29Y2172_STRP8 (P60362) UPF0297 protein spyM18_2172 28 5.9
30Y2114_STRP1 (P68886) UPF0297 protein SPy2114/M5005_Spy1797 28 5.9
31Y1798_STRP3 (P60361) UPF0297 protein SpyM3_1798/SPs1796 28 5.9
32Y1796_STRP6 (Q5X9I2) UPF0297 protein M6_Spy1796 28 5.9
33Y1781_STRPM (Q48QW9) UPF0297 protein M28_Spy1781 28 5.9
34WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC... 28 5.9

>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score =  107 bits (266), Expect = 1e-23
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI
Sbjct: 813 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862



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>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)|
          Length = 866

 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 43/50 (86%), Positives = 45/50 (90%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           KVVGMN D  LKNRNGPA+FPYMLLYPNTSD  GAAAG+TAKGIPNSISI
Sbjct: 817 KVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866



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>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)|
          Length = 863

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 37/50 (74%), Positives = 43/50 (86%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           KV+ MN DP LKNR GPA FPY L++PNTSD+KGAA G+TA+GIPNSISI
Sbjct: 814 KVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863



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>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)|
          Length = 870

 Score = 77.4 bits (189), Expect = 9e-15
 Identities = 37/50 (74%), Positives = 40/50 (80%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           +VV MN DP  KNR GP  FPY LLYPNTSD KG AAGL+A+GIPNSISI
Sbjct: 821 RVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870



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>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)|
          Length = 877

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 34/51 (66%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSD-HKGAAAGLTAKGIPNSISI 146
           ++  MN +  LKNRNGP K PYMLLYPNTSD  K    GLTA GIPNSISI
Sbjct: 827 RIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSISI 877



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>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 862

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           K++G N D  L+NRNGP K PY +L P   D      GLT +GIPNSISI
Sbjct: 818 KIMGRNKDSSLRNRNGPVKMPYTVLLPTCEDE-----GLTFRGIPNSISI 862



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>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)|
          Length = 853

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           K++  N D  L+NR GPAK PY LLYP++ +      GLT +GIPNSISI
Sbjct: 810 KLIEKNKDETLRNRYGPAKMPYTLLYPSSEE------GLTFRGIPNSISI 853



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>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)|
          Length = 866

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 26/50 (52%), Positives = 33/50 (66%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           K+   N+D  L+NR GP K PY LLYP++ +      GLT +GIPNSISI
Sbjct: 823 KLTQRNNDESLRNRYGPVKMPYTLLYPSSEE------GLTCRGIPNSISI 866



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>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)|
          Length = 861

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           K+   N+D +L+NR+GP + PY LLYP++ +      GLT +GIPNSISI
Sbjct: 818 KLTQRNNDEKLRNRHGPVEMPYTLLYPSSKE------GLTFRGIPNSISI 861



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>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)|
          Length = 864

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 26/50 (52%), Positives = 31/50 (62%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           K+   N DP L+NR GP + PY LL      H+ +  GLT KGIPNSISI
Sbjct: 821 KINARNSDPSLRNRTGPVQLPYTLL------HRSSEEGLTFKGIPNSISI 864



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>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)|
          Length = 839

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = -3

Query: 295 KVVGMNHDPELK-NRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           K+V  N+DP L+ NR GP + PY LLYP++ +      GLT +GIPNSISI
Sbjct: 795 KLVRRNNDPSLQGNRLGPVQLPYTLLYPSSEE------GLTFRGIPNSISI 839



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>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)|
          Length = 865

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 25/50 (50%), Positives = 31/50 (62%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           K+   N+D  L NR GP + PY LL+PN+        GLT +GIPNSISI
Sbjct: 823 KLARKNNDQSLSNRLGPVQLPYTLLHPNSE-------GLTCRGIPNSISI 865



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>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)|
          Length = 864

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           K+   N+DP L +R GP + PY LL+P++ +      GLT +GIPNSISI
Sbjct: 821 KLTNKNNDPSLYHRVGPVQLPYTLLHPSSKE------GLTFRGIPNSISI 864



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>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)|
          Length = 859

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           +++ MN     KNR+GP   PY LL+P + +      GLT KGIPNS+SI
Sbjct: 816 RIMIMNSHKSWKNRSGPVNVPYTLLFPTSEE------GLTGKGIPNSVSI 859



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>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)|
          Length = 857

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/50 (48%), Positives = 33/50 (66%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           K+   N+D +L+NR GP + PY LL P++ +      GLT +GIPNSISI
Sbjct: 814 KLSERNNDEKLRNRCGPVQMPYTLLLPSSKE------GLTFRGIPNSISI 857



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>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 861

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 23/50 (46%), Positives = 30/50 (60%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           +++  N D  L NR+GP   PY LL+P +        GLT KGIPNS+SI
Sbjct: 818 QIIQRNGDNILTNRSGPVNAPYTLLFPTSE------GGLTGKGIPNSVSI 861



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>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = -3

Query: 280 NHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           N D  LKNR G  K PY LL+P++        G+T +GIPNS+SI
Sbjct: 821 NDDETLKNRTGLVKMPYTLLFPSSE------GGVTGRGIPNSVSI 859



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>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)|
          Length = 741

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 22/44 (50%), Positives = 29/44 (65%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGI 164
           K+V  N+D  L+NR GPAK PY LLYP++ +      GLT +GI
Sbjct: 704 KLVQKNNDETLRNRTGPAKMPYTLLYPSSEE------GLTFRGI 741



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>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 22/50 (44%), Positives = 29/50 (58%)
 Frame = -3

Query: 295 KVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           +++  N +  L NR GP   PY LL+P +        GLT KGIPNS+SI
Sbjct: 817 QIMQRNGNNILTNRTGPVNAPYTLLFPTSE------GGLTGKGIPNSVSI 860



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>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)|
           (LOX2:Hv:3)
          Length = 896

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = -3

Query: 280 NHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           N++PE KNR G    PY LL P +        G+T +GIPNSISI
Sbjct: 858 NNNPENKNRCGAGIVPYELLKPFSE------PGVTGRGIPNSISI 896



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>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
            1.13.11.12)
          Length = 941

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 22/47 (46%), Positives = 26/47 (55%)
 Frame = -3

Query: 286  GMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
            G N D +LKNR G    PY L+ P +       AG+T  GIPNS SI
Sbjct: 901  GRNKDRKLKNRCGAGILPYQLMKPFSD------AGVTGMGIPNSTSI 941



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>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)|
            (LOX-100) (LOX2:Hv:1)
          Length = 936

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = -3

Query: 280  NHDPELKNRNGPAKFPYMLLYPNTSDHKGA----AAGLTAKGIPNSISI 146
            N+DP+ KNR+G    PY+LL P+  D           +   GIPNSISI
Sbjct: 888  NNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936



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>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)|
          Length = 924

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 21/47 (44%), Positives = 26/47 (55%)
 Frame = -3

Query: 286  GMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
            G N D +LKNR G    PY L+ P +       +G+T  GIPNS SI
Sbjct: 884  GRNKDRKLKNRCGAGILPYQLMKPFSD------SGVTGMGIPNSTSI 924



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>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)|
          Length = 899

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -3

Query: 280 NHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           N DP  +NR G    PY L+ P+      +  G+T +G+PNS++I
Sbjct: 861 NADPSRRNRCGAGVLPYELMAPS------SGPGITCRGVPNSVTI 899



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>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)|
          Length = 918

 Score = 35.4 bits (80), Expect = 0.037
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = -3

Query: 280 NHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           N D   KNR G    PY LL P++        G+T +G+PNSISI
Sbjct: 880 NADHGRKNRCGAGVLPYELLAPSSPP------GVTCRGVPNSISI 918



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>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)|
            (LOX2:Hv:2)
          Length = 932

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 19/45 (42%), Positives = 24/45 (53%)
 Frame = -3

Query: 280  NHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
            N D   +NR+G    PY+LL P   +   A   +   GIPNSISI
Sbjct: 889  NKDDSRRNRHGAGVVPYVLLRPLNGNPMDAKT-VMEMGIPNSISI 932



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>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)|
          Length = 896

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 20/40 (50%), Positives = 23/40 (57%)
 Frame = -3

Query: 265 LKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 146
           LKNR G     Y LL P TS+H     G+T  G+P SISI
Sbjct: 863 LKNRAGAGVVKYELLKP-TSEH-----GVTGMGVPYSISI 896



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>CAD16_MOUSE (O88338) Cadherin-16 precursor (Kidney-specific cadherin)|
           (Ksp-cadherin)
          Length = 830

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 292 VVGMNHDPELKNRNGPAKF 236
           V G++ DP+L NRNGP  F
Sbjct: 688 VSGVSEDPDLANRNGPYSF 706



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>Y2172_STRP8 (P60362) UPF0297 protein spyM18_2172|
          Length = 89

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 84  RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 209
           RQ+S    A+Y S+   G N +  ++G  L+  PA  P +++
Sbjct: 18  RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59



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>Y2114_STRP1 (P68886) UPF0297 protein SPy2114/M5005_Spy1797|
          Length = 89

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 84  RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 209
           RQ+S    A+Y S+   G N +  ++G  L+  PA  P +++
Sbjct: 18  RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59



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>Y1798_STRP3 (P60361) UPF0297 protein SpyM3_1798/SPs1796|
          Length = 89

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 84  RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 209
           RQ+S    A+Y S+   G N +  ++G  L+  PA  P +++
Sbjct: 18  RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59



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>Y1796_STRP6 (Q5X9I2) UPF0297 protein M6_Spy1796|
          Length = 89

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 84  RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 209
           RQ+S    A+Y S+   G N +  ++G  L+  PA  P +++
Sbjct: 18  RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59



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>Y1781_STRPM (Q48QW9) UPF0297 protein M28_Spy1781|
          Length = 89

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 84  RQVSYVANALYSSMVADGLN*MEMLLGMPLAVSPAAAPLWSE 209
           RQ+S    A+Y S+   G N +  ++G  L+  PA  P +++
Sbjct: 18  RQISETLTAVYHSLDEKGYNPINQIVGYVLSGDPAYVPRYND 59



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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -2

Query: 272  PGAQEPQRPG*VSLHAALPQHLRPQGRRCRAYRQGHPQQH 153
            PGA E +RPG        P+  R +GRR  ++R+G P +H
Sbjct: 1074 PGAWEGRRPGDERFPRD-PEDPRFRGRREESFRRGAPPRH 1112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,700,252
Number of Sequences: 219361
Number of extensions: 695065
Number of successful extensions: 1585
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1566
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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