ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl21b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107337.1| Zea mays PCO064147 mRNA sequence 121 2e-24
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 101 1e-18
3dbj|AK102910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
4emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 101 1e-18
5emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 101 1e-18
6ref|XM_474407.1| Oryza sativa (japonica cultivar-group), predic... 96 9e-17
7dbj|AK073897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 4e-16
8gb|AY111562.1| Zea mays CL51463_1 mRNA sequence 54 3e-04
9gb|AY104073.1| Zea mays PCO099302 mRNA sequence 54 3e-04
10ref|NM_121300.2| Arabidopsis thaliana unknown protein AT5G12970 ... 40 4.6
11gb|AC165074.2| Mus musculus BAC clone RP24-501F1 from chromosome... 40 4.6
12gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, comp... 40 4.6
13gb|AC113509.14| Mus musculus chromosome 1, clone RP23-377L11, co... 40 4.6
14gb|AC157991.5| Mus musculus chromosome 18, clone RP23-335B10, co... 40 4.6
15gb|AC132914.7| Mus musculus chromosome 1, clone RP24-318M2, comp... 40 4.6
16gb|AC102155.10| Mus musculus chromosome 18, clone RP23-334J12, c... 40 4.6
17gb|BC070747.1| Xenopus laevis hypothetical protein MGC83751, mRN... 40 4.6
18gb|AC112794.4| Mus musculus chromosome 12 clone RP24-121O24, com... 40 4.6
19emb|CT030278.1| Xenopus tropicalis finished cDNA, clone TEgg068n01 40 4.6
20gb|AC121829.3| Mus musculus BAC clone RP23-480P21 from chromosom... 40 4.6
21gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosom... 40 4.6
22gb|AC166755.2| Mus musculus BAC clone RP24-220N14 from chromosom... 40 4.6
23gb|AC157798.5| Mus musculus chromosome 1, clone RP24-153N24, com... 40 4.6
24gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, comp... 40 4.6
25emb|X77646.2|TMPLA2ANI Trimeresurus mucrosquamatus phospholipase... 40 4.6
26emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, B... 40 4.6
27emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in l... 40 4.6
28gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosom... 40 4.6
29gb|AC087465.5| Homo sapiens chromosome 15, clone RP11-94P14, com... 40 4.6
30gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, co... 40 4.6
31gb|AC159620.2| Mus musculus BAC clone RP24-354K18 from chromosom... 40 4.6
32gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, com... 40 4.6
33dbj|AK035553.1| Mus musculus adult male urinary bladder cDNA, RI... 40 4.6
34ref|NM_207096.1| Danio rerio wingless-type MMTV integration site... 40 4.6
35emb|BX830559.1|CNS09YQ0 Arabidopsis thaliana Full-length cDNA Co... 40 4.6
36gb|BC066432.1| Danio rerio wingless-type MMTV integration site f... 40 4.6
37emb|AL591411.14| Mouse DNA sequence from clone RP23-428M13 on ch... 40 4.6
38gb|AC134827.4| Mus musculus BAC clone RP24-470E5 from 5, complet... 40 4.6
39gb|AC132087.4| Mus musculus BAC clone RP24-407J14 from 9, comple... 40 4.6
40gb|AC133520.4| Mus musculus BAC clone RP23-185G9 from 8, complet... 40 4.6
41emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chr... 40 4.6
42emb|AL732460.7| Mouse DNA sequence from clone RP23-113I19 on chr... 40 4.6 
>gb|AY107337.1| Zea mays PCO064147 mRNA sequence
          Length = 1264

 Score =  121 bits (61), Expect = 2e-24
 Identities = 145/173 (83%)
 Strand = Plus / Minus

                                                                        
Query: 172  tctagggattacaacgataaggccaccagatagtagcatcttcacagcatactgtccgtc 231
            ||||||||||||||||||||| ||||||| |||| || | || | ||||||  ||| |||
Sbjct: 1078 tctagggattacaacgataagaccaccaggtagtggcttatttatagcatagagtcagtc 1019

                                                                        
Query: 232  ctcgctggcaaacgcctgaagaagtttaccggcgttgaaggcaacctgtgcctgaacctt 291
            || |||||||| || |||||||||||||| ||   ||| |||||||| || |||||||||
Sbjct: 1018 cttgctggcaaccgtctgaagaagtttactggtactgagggcaacctatgtctgaacctt 959

                                                                 
Query: 292  gggtgcctcatggcatacaaccctcctaatgctgcgagaacctggagcggtgt 344
            |||||||||||  |||| |||||||||||||| || | ||| || ||||||||
Sbjct: 958  gggtgcctcatcacatagaaccctcctaatgcagcaataacttgaagcggtgt 906
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  101 bits (51), Expect = 1e-18
 Identities = 135/163 (82%)
 Strand = Plus / Minus

                                                                            
Query: 182      acaacgataaggccaccagatagtagcatcttcacagcatactgtccgtcctcgctggca 241
                |||| |||||||||||||||| | |||   || | ||||| ||||| ||||| |||||||
Sbjct: 34954907 acaatgataaggccaccagatggcagctattttatagcatgctgtcggtccttgctggca 34954848

                                                                            
Query: 242      aacgcctgaagaagtttaccggcgttgaaggcaacctgtgcctgaaccttgggtgcctca 301
                  || |||||||| || || ||||||||||||||||| |  |||||||| ||||||||||
Sbjct: 34954847 gtcgtctgaagaaattcactggcgttgaaggcaacctatatctgaacctcgggtgcctca 34954788

                                                           
Query: 302      tggcatacaaccctcctaatgctgcgagaacctggagcggtgt 344
                || |||| |||||| | |||||||| ||||| ||||| |||||
Sbjct: 34954787 tgacatagaaccctgccaatgctgcaagaacttggagtggtgt 34954745
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>dbj|AK102910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033113J04, full
            insert sequence
          Length = 3717

 Score =  101 bits (51), Expect = 1e-18
 Identities = 135/163 (82%)
 Strand = Plus / Minus

                                                                        
Query: 182  acaacgataaggccaccagatagtagcatcttcacagcatactgtccgtcctcgctggca 241
            |||| |||||||||||||||| | |||   || | ||||| ||||| ||||| |||||||
Sbjct: 3497 acaatgataaggccaccagatggcagctattttatagcatgctgtcggtccttgctggca 3438

                                                                        
Query: 242  aacgcctgaagaagtttaccggcgttgaaggcaacctgtgcctgaaccttgggtgcctca 301
              || |||||||| || || ||||||||||||||||| |  |||||||| ||||||||||
Sbjct: 3437 gtcgtctgaagaaattcactggcgttgaaggcaacctatatctgaacctcgggtgcctca 3378

                                                       
Query: 302  tggcatacaaccctcctaatgctgcgagaacctggagcggtgt 344
            || |||| |||||| | |||||||| ||||| ||||| |||||
Sbjct: 3377 tgacatagaaccctgccaatgctgcaagaacttggagtggtgt 3335
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>emb|AL732345.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0306F12, complete
             sequence
          Length = 84361

 Score =  101 bits (51), Expect = 1e-18
 Identities = 135/163 (82%)
 Strand = Plus / Minus

                                                                         
Query: 182   acaacgataaggccaccagatagtagcatcttcacagcatactgtccgtcctcgctggca 241
             |||| |||||||||||||||| | |||   || | ||||| ||||| ||||| |||||||
Sbjct: 60289 acaatgataaggccaccagatggcagctattttatagcatgctgtcggtccttgctggca 60230

                                                                         
Query: 242   aacgcctgaagaagtttaccggcgttgaaggcaacctgtgcctgaaccttgggtgcctca 301
               || |||||||| || || ||||||||||||||||| |  |||||||| ||||||||||
Sbjct: 60229 gtcgtctgaagaaattcactggcgttgaaggcaacctatatctgaacctcgggtgcctca 60170

                                                        
Query: 302   tggcatacaaccctcctaatgctgcgagaacctggagcggtgt 344
             || |||| |||||| | |||||||| ||||| ||||| |||||
Sbjct: 60169 tgacatagaaccctgccaatgctgcaagaacttggagtggtgt 60127
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>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
             complete sequence
          Length = 145391

 Score =  101 bits (51), Expect = 1e-18
 Identities = 135/163 (82%)
 Strand = Plus / Minus

                                                                         
Query: 182   acaacgataaggccaccagatagtagcatcttcacagcatactgtccgtcctcgctggca 241
             |||| |||||||||||||||| | |||   || | ||||| ||||| ||||| |||||||
Sbjct: 13959 acaatgataaggccaccagatggcagctattttatagcatgctgtcggtccttgctggca 13900

                                                                         
Query: 242   aacgcctgaagaagtttaccggcgttgaaggcaacctgtgcctgaaccttgggtgcctca 301
               || |||||||| || || ||||||||||||||||| |  |||||||| ||||||||||
Sbjct: 13899 gtcgtctgaagaaattcactggcgttgaaggcaacctatatctgaacctcgggtgcctca 13840

                                                        
Query: 302   tggcatacaaccctcctaatgctgcgagaacctggagcggtgt 344
             || |||| |||||| | |||||||| ||||| ||||| |||||
Sbjct: 13839 tgacatagaaccctgccaatgctgcaagaacttggagtggtgt 13797
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>ref|XM_474407.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3036

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 108/128 (84%)
 Strand = Plus / Minus

                                                                        
Query: 217  agcatactgtccgtcctcgctggcaaacgcctgaagaagtttaccggcgttgaaggcaac 276
            ||||| ||||| ||||| |||||||  || |||||||| || || |||||||||||||||
Sbjct: 3032 agcatgctgtcggtccttgctggcagtcgtctgaagaaattcactggcgttgaaggcaac 2973

                                                                        
Query: 277  ctgtgcctgaaccttgggtgcctcatggcatacaaccctcctaatgctgcgagaacctgg 336
            || |  |||||||| |||||||||||| |||| |||||| | |||||||| ||||| |||
Sbjct: 2972 ctatatctgaacctcgggtgcctcatgacatagaaccctgccaatgctgcaagaacttgg 2913

                    
Query: 337  agcggtgt 344
            || |||||
Sbjct: 2912 agtggtgt 2905
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>dbj|AK073897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075A06, full
            insert sequence
          Length = 3730

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 134/163 (82%)
 Strand = Plus / Minus

                                                                        
Query: 182  acaacgataaggccaccagatagtagcatcttcacagcatactgtccgtcctcgctggca 241
            |||| |||||||||||||||| | |||   || | ||||| ||||| | ||| |||||||
Sbjct: 3519 acaatgataaggccaccagatggcagctattttatagcatgctgtcggcccttgctggca 3460

                                                                        
Query: 242  aacgcctgaagaagtttaccggcgttgaaggcaacctgtgcctgaaccttgggtgcctca 301
              || |||||||| || || ||||||||||||||||| |  |||||||| ||||||||||
Sbjct: 3459 gtcgtctgaagaaattcactggcgttgaaggcaacctatatctgaacctcgggtgcctca 3400

                                                       
Query: 302  tggcatacaaccctcctaatgctgcgagaacctggagcggtgt 344
            || |||| |||||| | |||||||| ||||| ||||| |||||
Sbjct: 3399 tgacatagaaccctgccaatgctgcaagaacttggagtggtgt 3357
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>gb|AY111562.1| Zea mays CL51463_1 mRNA sequence
          Length = 612

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 215 acagcatactgtccgtcctcgctggcaaacgcctgaagaagtt 257
           ||||||| ||||| |||||||| |||| |||||||||||||||
Sbjct: 353 acagcatgctgtcagtcctcgccggcagacgcctgaagaagtt 395
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>gb|AY104073.1| Zea mays PCO099302 mRNA sequence
          Length = 1254

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 215 acagcatactgtccgtcctcgctggcaaacgcctgaagaagtt 257
           ||||||| ||||| |||||||| |||| |||||||||||||||
Sbjct: 989 acagcatgctgtcggtcctcgccggcagacgcctgaagaagtt 947
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>ref|NM_121300.2| Arabidopsis thaliana unknown protein AT5G12970 mRNA, complete cds
          Length = 2557

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 278  tgtgcctgaaccttgggtgcctca 301
            |||||||||||||||| |||||||
Sbjct: 2466 tgtgcctgaaccttggatgcctca 2443
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>gb|AC165074.2| Mus musculus BAC clone RP24-501F1 from chromosome 12, complete sequence
          Length = 166016

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   caaccctcctaatgctgcga 328
             ||||||||||||||||||||
Sbjct: 71846 caaccctcctaatgctgcga 71865
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>gb|AC091455.12| Mus musculus chromosome 1, clone RP23-23O9, complete sequence
          Length = 257924

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   aatgctgcgagaacctggag 338
             ||||||||||||||||||||
Sbjct: 52476 aatgctgcgagaacctggag 52495
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>gb|AC113509.14| Mus musculus chromosome 1, clone RP23-377L11, complete sequence
          Length = 193588

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    caaccctcctaatgctgcga 328
              ||||||||||||||||||||
Sbjct: 108722 caaccctcctaatgctgcga 108741
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>gb|AC157991.5| Mus musculus chromosome 18, clone RP23-335B10, complete sequence
          Length = 198636

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 156    acagacatggagtaattcta 175
              ||||||||||||||||||||
Sbjct: 133750 acagacatggagtaattcta 133769
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>gb|AC132914.7| Mus musculus chromosome 1, clone RP24-318M2, complete sequence
          Length = 157264

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 121    aacagtcacaaataataacacagc 144
              |||||||||||||||||| |||||
Sbjct: 129658 aacagtcacaaataataaaacagc 129635
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>gb|AC102155.10| Mus musculus chromosome 18, clone RP23-334J12, complete sequence
          Length = 189666

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    acagacatggagtaattcta 175
              ||||||||||||||||||||
Sbjct: 164883 acagacatggagtaattcta 164864
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>gb|BC070747.1| Xenopus laevis hypothetical protein MGC83751, mRNA (cDNA clone
           MGC:83751 IMAGE:6640465), complete cds
          Length = 2200

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 gacagacatggagtaattct 174
           ||||||||||||||||||||
Sbjct: 923 gacagacatggagtaattct 904
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>gb|AC112794.4| Mus musculus chromosome 12 clone RP24-121O24, complete sequence
          Length = 171520

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   caaccctcctaatgctgcga 328
             ||||||||||||||||||||
Sbjct: 20845 caaccctcctaatgctgcga 20864
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>emb|CT030278.1| Xenopus tropicalis finished cDNA, clone TEgg068n01
          Length = 2184

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 gacagacatggagtaattct 174
           ||||||||||||||||||||
Sbjct: 896 gacagacatggagtaattct 877
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>gb|AC121829.3| Mus musculus BAC clone RP23-480P21 from chromosome 5, complete sequence
          Length = 197131

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    caaccctcctaatgctgcga 328
              ||||||||||||||||||||
Sbjct: 122062 caaccctcctaatgctgcga 122081
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>gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosome 8, complete sequence
          Length = 234158

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   caaccctcctaatgctgcga 328
             ||||||||||||||||||||
Sbjct: 62916 caaccctcctaatgctgcga 62935
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>gb|AC166755.2| Mus musculus BAC clone RP24-220N14 from chromosome 9, complete sequence
          Length = 173308

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   caaccctcctaatgctgcga 328
             ||||||||||||||||||||
Sbjct: 66330 caaccctcctaatgctgcga 66311
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>gb|AC157798.5| Mus musculus chromosome 1, clone RP24-153N24, complete sequence
          Length = 163087

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    caaccctcctaatgctgcga 328
              ||||||||||||||||||||
Sbjct: 158018 caaccctcctaatgctgcga 158037
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>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence
          Length = 230597

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   aatgctgcgagaacctggag 338
             ||||||||||||||||||||
Sbjct: 21289 aatgctgcgagaacctggag 21270
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>emb|X77646.2|TMPLA2ANI Trimeresurus mucrosquamatus phospholipase A2 antiplatelet protein
           mRNA
          Length = 445

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 ggcgttgaaggcaacctgtg 281
           ||||||||||||||||||||
Sbjct: 53  ggcgttgaaggcaacctgtg 72
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>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project)
          Length = 90020

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 278   tgtgcctgaaccttgggtgcctca 301
             |||||||||||||||| |||||||
Sbjct: 57053 tgtgcctgaaccttggatgcctca 57030
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>emb|CR925699.6| Zebrafish DNA sequence from clone RP71-18J1 in linkage group 4, complete
              sequence
          Length = 150030

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      gatatttcatcaacatgctt 27
              ||||||||||||||||||||
Sbjct: 139743 gatatttcatcaacatgctt 139762
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>gb|AC161590.2| Mus musculus BAC clone RP24-300B21 from chromosome 9, complete sequence
          Length = 162840

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   caaccctcctaatgctgcga 328
             ||||||||||||||||||||
Sbjct: 89716 caaccctcctaatgctgcga 89735
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>gb|AC087465.5| Homo sapiens chromosome 15, clone RP11-94P14, complete sequence
          Length = 163320

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    ttccaaaacctggcaagtca 45
             ||||||||||||||||||||
Sbjct: 22717 ttccaaaacctggcaagtca 22698
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>gb|AC113015.12| Mus musculus chromosome 1, clone RP23-180E19, complete sequence
          Length = 188389

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    caaccctcctaatgctgcga 328
              ||||||||||||||||||||
Sbjct: 140000 caaccctcctaatgctgcga 139981
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>gb|AC159620.2| Mus musculus BAC clone RP24-354K18 from chromosome 12, complete sequence
          Length = 155161

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    caaccctcctaatgctgcga 328
              ||||||||||||||||||||
Sbjct: 148849 caaccctcctaatgctgcga 148868
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>gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, complete sequence
          Length = 202651

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   caaccctcctaatgctgcga 328
             ||||||||||||||||||||
Sbjct: 80388 caaccctcctaatgctgcga 80369
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>dbj|AK035553.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530065H03 product:hypothetical
            HECT domain (Ubiquitin-protein ligase) containing
            protein, full insert sequence
          Length = 4336

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  caaccctcctaatgctgcga 328
            ||||||||||||||||||||
Sbjct: 2633 caaccctcctaatgctgcga 2652
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>ref|NM_207096.1| Danio rerio wingless-type MMTV integration site family, member 16
            (wnt16), mRNA
          Length = 2005

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    gatatttcatcaacatgctt 27
            ||||||||||||||||||||
Sbjct: 1314 gatatttcatcaacatgctt 1295
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>emb|BX830559.1|CNS09YQ0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB90ZB04 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2560

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 278  tgtgcctgaaccttgggtgcctca 301
            |||||||||||||||| |||||||
Sbjct: 2470 tgtgcctgaaccttggatgcctca 2447
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>gb|BC066432.1| Danio rerio wingless-type MMTV integration site family, member 16,
            mRNA (cDNA clone MGC:77293 IMAGE:6965366), complete cds
          Length = 2005

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    gatatttcatcaacatgctt 27
            ||||||||||||||||||||
Sbjct: 1314 gatatttcatcaacatgctt 1295
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>emb|AL591411.14| Mouse DNA sequence from clone RP23-428M13 on chromosome 2, complete
             sequence
          Length = 155889

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   caaccctcctaatgctgcga 328
             ||||||||||||||||||||
Sbjct: 99846 caaccctcctaatgctgcga 99865
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>gb|AC134827.4| Mus musculus BAC clone RP24-470E5 from 5, complete sequence
          Length = 193811

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   caaccctcctaatgctgcga 328
             ||||||||||||||||||||
Sbjct: 64419 caaccctcctaatgctgcga 64400
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>gb|AC132087.4| Mus musculus BAC clone RP24-407J14 from 9, complete sequence
          Length = 169174

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    caaccctcctaatgctgcga 328
              ||||||||||||||||||||
Sbjct: 132246 caaccctcctaatgctgcga 132227
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>gb|AC133520.4| Mus musculus BAC clone RP23-185G9 from 8, complete sequence
          Length = 201054

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   caaccctcctaatgctgcga 328
             ||||||||||||||||||||
Sbjct: 65700 caaccctcctaatgctgcga 65681
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>emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chromosome 4, complete
              sequence
          Length = 184866

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    caaccctcctaatgctgcga 328
              ||||||||||||||||||||
Sbjct: 135679 caaccctcctaatgctgcga 135698
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>emb|AL732460.7| Mouse DNA sequence from clone RP23-113I19 on chromosome X, complete
              sequence
          Length = 198572

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    caaccctcctaatgctgcga 328
              ||||||||||||||||||||
Sbjct: 131899 caaccctcctaatgctgcga 131918


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,593,423
Number of Sequences: 3902068
Number of extensions: 2593423
Number of successful extensions: 76263
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76156
Number of HSP's gapped (non-prelim): 102
length of query: 344
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 322
effective length of database: 17,147,199,772
effective search space: 5521398326584
effective search space used: 5521398326584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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