>PDR1_ORYSA (Q7PC80) Probable pleiotropic drug resistance protein 1|
          Length = 1468

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 189  NPFHHFS*SVDCCPIWWAWNCTCCSSDFTVF 97
            N F  F  S    P+WW W C  C   +T++
Sbjct: 1373 NLFTGFVISRPATPVWWRWYCWICPVAWTLY 1403

>SODM2_HALME (O08460) Superoxide dismutase [Mn] 2 (EC 1.15.1.1) (Fragment)|
          Length = 146

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 221 LIYEGYVQQAAALHVNKHPDAPIWRTWP-NAMHVWE 325
           L+Y+   +Q   L V KH D  +W   P  A+ VWE
Sbjct: 94  LVYDPVTKQLRNLAVQKHNDGALWSAHPILALDVWE 129

>KUP_VIBCH (Q9KM59) Probable potassium transport system protein kup|
          Length = 620

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
 Frame = -1

Query: 329 LLPKHA-WHSAKFSRLAHPGAYLHAVLLPAVRTLRKLGLSSEEENKLIIHFTISASL*IV 153
           LL  HA WH+ +  R  +P   +H VLL    TL  LGL         +  +++    + 
Sbjct: 181 LLGAHAIWHAPQVLRALNPAYAVHFVLLYGQHTLFILGL---------VVLSVTGVEALY 231

Query: 152 APYGGHGI--------AHVVPVILLSLYPKSRFNSSSLVPKGT 48
           A  G  GI        A V+P +LL+ + +  +  +   P G+
Sbjct: 232 ADMGHFGIKPIRIAWFALVMPSLLLNYFGQGAYLLTLSAPTGS 274

>SHBG_PHOSU (Q62588) Sex hormone-binding globulin precursor (SHBG) (Sex|
           steroid-binding protein) (SBP) (Testis-specific
           androgen-binding protein) (ABP)
          Length = 399

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 24  NSLAKFCKCSFWNEG*RVESTLRI*RQ*NHWNNMCNSMP 140
           NS A FC    W +G R++    + R  N W + C   P
Sbjct: 353 NSSASFCLSDLWVQGQRLDIDQALNRSQNIWTHSCPHSP 391

>MT_PARLI (P80367) Metallothionein (MT)|
          Length = 65

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -3

Query: 321 QTCMAFGQVLQIGASGCLFTCSAAAC-CT 238
           Q C   G+  + GAS C  TCS AAC CT
Sbjct: 19  QECCITGKCCKDGASVCCGTCSNAACKCT 47

>SHBG_MOUSE (P97497) Sex hormone-binding globulin precursor (SHBG) (Sex|
           steroid-binding protein) (SBP) (Testis-specific
           androgen-binding protein) (ABP)
          Length = 403

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 24  NSLAKFCKCSFWNEG*RVESTLRI*RQ*NHWNNMCNSMPTIWGNNLQTS 170
           +S A FC   FW +G R++    + R  + W + C   P+   N+ +TS
Sbjct: 357 SSSASFCLSDFWVQGQRLDIDQALSRSQDIWTHSCPQRPS---NDTRTS 402

>NIA1_ORYSA (P16081) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)|
          Length = 916

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 206 PPMTNLIYEGYVQQAAALHVNKHPDAP--IWRTW 301
           PP+  L++ G++  AA  +V  H   P   W TW
Sbjct: 125 PPLAELMHHGFITPAALHYVANHGAVPRGDWSTW 158

>PDR3_ORYSA (Q8GU90) Pleiotropic drug resistance protein 3|
          Length = 1457

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 150  PIWWAWNCTCCSSDFTVF 97
            PIWW W C  C   +T++
Sbjct: 1375 PIWWRWYCWACPVAWTLY 1392

>VGFR3_MOUSE (P35917) Vascular endothelial growth factor receptor 3 precursor|
           (EC 2.7.10.1) (VEGFR-3) (Tyrosine-protein kinase
           receptor FLT4)
          Length = 1363

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 206 PPMTNLIYEGYVQQAA-ALHVNKHPDAPIWRTWPNAMHVWEAGGRN 340
           PP  N+  + YV     +L ++     P+  TWP A  V   GG++
Sbjct: 29  PPTLNITEDSYVIDTGDSLSISCRGQHPLEWTWPGAQEVLTTGGKD 74

>SHBG_RABIT (P15196) Sex hormone-binding globulin precursor (SHBG) (Sex|
           steroid-binding protein) (SBP) (Testis-specific
           androgen-binding protein) (ABP)
          Length = 398

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +3

Query: 24  NSLAKFCKCSFWNEG*RVESTLRI*RQ*NHWNNMCNSMPTIWGNNLQTS 170
           +S A FC    W +G +++    + R  + W + C S P   GN   TS
Sbjct: 352 DSSASFCLDGLWAQGQKLDMDKALNRSQDIWTHSCPSSP---GNGTDTS 397

>PDR2_ORYSA (Q8GU92) Probable pleiotropic drug resistance protein 2|
          Length = 1464

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 150  PIWWAWNCTCCSSDFTVF 97
            PIWW W C  C   +T++
Sbjct: 1382 PIWWRWYCWICPVAWTLY 1399

>SODM2_HALVO (Q03301) Superoxide dismutase [Mn] 2 (EC 1.15.1.1)|
          Length = 199

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 221 LIYEGYVQQAAALHVNKHPDAPIWRTWP-NAMHVWEAGGRNELG 349
           L+Y+ +  Q   + V+KH    +W + P  A+ VWE    ++ G
Sbjct: 125 LVYDSFSNQLRNVVVDKHDQGALWGSHPILALDVWEHSYYHDYG 168

>THYX_PYRAE (Q8ZWD6) Thymidylate synthase thyX (EC 2.1.1.148) (TS) (TSase)|
          Length = 244

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +2

Query: 236 YVQQAAALHVNKHPDAPIWRTWPN-AMHVWE 325
           Y  QA   HV     A  WR WPN A  VWE
Sbjct: 168 YAAQAEIRHVCWQMFAHAWRLWPNLARLVWE 198

>C4AA1_DROME (Q9V7G5) Probable cytochrome P450 4aa1 (EC 1.14.-.-) (CYPIVAA1)|
          Length = 514

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -1

Query: 254 LLPAVRTL-RKLGLSSEEENKLIIHFTISASL*IVAPYGGHGIAHVVP 114
           L P+V  + RKLG    EE +L  H   + S   + PY  H +AH+ P
Sbjct: 378 LYPSVPLIARKLG----EEVRLAKHTLPAGSNVFICPYATHRLAHIYP 421

>SODM1_HALME (O08461) Superoxide dismutase [Mn] 1 (EC 1.15.1.1) (Fragment)|
          Length = 144

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 221 LIYEGYVQQAAALHVNKHPDAPIWRTWP-NAMHVWEAGGRNELG 349
           L+Y+ +  Q   + V+KH    +W + P  A+ VWE    ++ G
Sbjct: 92  LVYDSFSNQLRNVVVDKHDQGALWGSHPILALDVWEHSYYHDYG 135

>SODM1_HALVO (Q03300) Superoxide dismutase [Mn] 1 (EC 1.15.1.1)|
          Length = 200

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 221 LIYEGYVQQAAALHVNKHPDAPIWRTWP-NAMHVWEAGGRNELG 349
           L+Y+ +  Q   + V+KH    +W + P  A+ VWE    ++ G
Sbjct: 126 LVYDSFSNQLRNVVVDKHDQGALWGSHPILALDVWEHSYYHDYG 169

>HPS1_MOUSE (O08983) Hermansky-Pudlak syndrome 1 protein homolog|
          Length = 704

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 16/65 (24%), Positives = 30/65 (46%)
 Frame = -1

Query: 290 RLAHPGAYLHAVLLPAVRTLRKLGLSSEEENKLIIHFTISASL*IVAPYGGHGIAHVVPV 111
           RL HP     ++       ++ +  S E   + ++H  +     ++A Y GHG + + P 
Sbjct: 173 RLIHPQLCEQSIETLERHVVQAINASPERGGEEVLHAFLLVHCKLLAFYSGHGASTLRPA 232

Query: 110 ILLSL 96
            LL+L
Sbjct: 233 DLLAL 237

>BCSB2_ACEXY (O82860) Cyclic di-GMP-binding protein precursor (Cellulose|
           synthase regulatory subunit) (Cellulose synthase protein
           B) (CDGBP)
          Length = 802

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 203 LPPMTNLIYEGYVQQAAALHVNKHPDAPIWRTWPNAMHV 319
           L P + L  EGY   A A+     PD   WR  PN ++V
Sbjct: 388 LVPDSALQAEGYAPGALAVPFRVSPDLYTWRDRPNKLNV 426

>PDR4_ORYSA (Q8GU89) Pleiotropic drug resistance protein 4|
          Length = 1450

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 150  PIWWAWNCTCCSSDFTVF 97
            P+WW W C  C   +T++
Sbjct: 1367 PVWWRWYCWICPVAWTLY 1384

>SRB8_YEAST (P25648) Suppressor of RNA polymerase B SRB8|
          Length = 1427

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 121  LFQ*FYCLYIRRVDSTRHPSFQKEHLQNFASELI 20
            +FQ F C  I+++     P+   E L+NF  ++I
Sbjct: 1088 VFQAFTCFCIKKIMENNEPAMAMEDLKNFIFQII 1121

>NIA2_HORVU (P27969) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) (Fragment)|
          Length = 912

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 206 PPMTNLIYEGYVQQAAALHVNKHPDAP--IWRTW 301
           PP+  L++ G++  A   +V  H   P   W TW
Sbjct: 119 PPLARLMHHGFITPAPLHYVRNHGAVPRGDWATW 152

>MPIP1_CAEEL (O44552) M-phase inducer phosphatase cdc-25.1 (EC 3.1.3.48) (Cell|
           division cycle-related protein 25.1)
          Length = 604

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = +1

Query: 31  LQNSANVPFGTRDDELNRLFGYKDSKITGTTC-AIPCPPYGATIYRLA 171
           L N  + PFG  DDE+      ++S++  T+  A P P    +++ LA
Sbjct: 178 LNNPRDDPFGDEDDEVFEQSNVRNSQVQNTSIFAQPAPRTATSLWDLA 225

>FSHB_MASCO (Q6SI68) Follitropin beta chain precursor (Follicle-stimulating|
           hormone beta subunit) (FSH-beta) (FSH-B)
          Length = 130

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
 Frame = -3

Query: 165 SVDCCPIWWAWNCTCCSS----DFTVFISEESIQLVI 67
           S+  C + W W   CC S    + T+ I +E  +  I
Sbjct: 4   SIQLCILLWCWRAICCHSCELTNITISIEKEECRFCI 40

>NIA1_HORVU (P27967) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)|
          Length = 915

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 206 PPMTNLIYEGYVQQAAALHVNKHPDAP--IWRTW 301
           PP+  L++ G++  A   +V  H   P   W TW
Sbjct: 122 PPLARLMHHGFITPAPLHYVRNHGAVPRGDWATW 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,472,518
Number of Sequences: 219361
Number of extensions: 1192446
Number of successful extensions: 3436
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3435
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)