ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl21b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZNHI2_HUMAN (Q9UHR6) Zinc finger HIT domain-containing protein 2... 30 1.9
2ZNHI2_MOUSE (Q9QY66) Zinc finger HIT domain-containing protein 2... 29 2.5
3YFC3_SCHPO (O14138) Hypothetical protein C25A8.03c in chromosome I 28 5.5
4ISK5_HUMAN (Q9NQ38) Serine protease inhibitor Kazal-type 5 precu... 28 7.2
5ATP6_AEDAL (Q5JCK5) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 27 9.4

>ZNHI2_HUMAN (Q9UHR6) Zinc finger HIT domain-containing protein 2 (Protein FON)|
          Length = 403

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 351 VPLFFEAMESLIK*-VTGNLRMDIPSKLFSYEHTAVLFHG 235
           VP    A+ SL +  V+  +R  +P+ LF+Y HT  L+HG
Sbjct: 192 VPTRIPAIVSLSRGPVSPLVRFQLPNVLFAYAHTLALYHG 231



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>ZNHI2_MOUSE (Q9QY66) Zinc finger HIT domain-containing protein 2 (Protein FON)|
          Length = 399

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 297 LRMDIPSKLFSYEHTAVLFHG 235
           +R  +P+ LF+Y HT  L+HG
Sbjct: 206 VRFQLPNVLFAYAHTLALYHG 226



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>YFC3_SCHPO (O14138) Hypothetical protein C25A8.03c in chromosome I|
          Length = 467

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 254 QLCCFMEVSVNCIVLLLCYFYFTVFKLLVSWFQNFLGILILDIL 123
           Q   F E   N +VL     YF VF L +  F +  GI+ LDIL
Sbjct: 126 QRSLFSESISNYLVLQYKLRYFPVFDLKIYDFHSGTGIIALDIL 169



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>ISK5_HUMAN (Q9NQ38) Serine protease inhibitor Kazal-type 5 precursor|
           (Lympho-epithelial Kazal-type-related inhibitor) (LEKTI)
           [Contains: Hemofiltrate peptide HF6478; Hemofiltrate
           peptide HF7665]
          Length = 1064

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +2

Query: 29  QIKKKQGVFSCTMT*QEKFRLVKGKIY-NLCGTKCPG*VSLENSETKKLTA*IR*SRSNT 205
           Q + K G+  CT    +  R   GK++ NLC + C      EN E KK  A  R  R + 
Sbjct: 301 QNQAKNGILFCTRE-NDPIRGPDGKMHGNLC-SMCQAYFQAENEEKKKAEARARNKRESG 358

Query: 206 ITTQY 220
             T Y
Sbjct: 359 KATSY 363



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>ATP6_AEDAL (Q5JCK5) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 226

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -1

Query: 188 TVFKLLVSWFQNFLGILIL 132
           T+F + ++WF  F+G+LI+
Sbjct: 14  TIFNMSLNWFSTFIGLLII 32


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,053,007
Number of Sequences: 219361
Number of extensions: 798429
Number of successful extensions: 1713
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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