ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl21b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZNHI2_MOUSE (Q9QY66) Zinc finger HIT domain-containing protein 2... 28 4.7
2ZNHI2_HUMAN (Q9UHR6) Zinc finger HIT domain-containing protein 2... 28 4.7
3OR8K5_HUMAN (Q8NH50) Olfactory receptor 8K5 28 8.1
4YFC3_SCHPO (O14138) Hypothetical protein C25A8.03c in chromosome I 28 8.1

>ZNHI2_MOUSE (Q9QY66) Zinc finger HIT domain-containing protein 2 (Protein FON)|
          Length = 399

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 190 LRMDIPSKLFSYEHTPVLFHG 128
           +R  +P+ LF+Y HT  L+HG
Sbjct: 206 VRFQLPNVLFAYAHTLALYHG 226



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>ZNHI2_HUMAN (Q9UHR6) Zinc finger HIT domain-containing protein 2 (Protein FON)|
          Length = 403

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -2

Query: 190 LRMDIPSKLFSYEHTPVLFHG 128
           +R  +P+ LF+Y HT  L+HG
Sbjct: 211 VRFQLPNVLFAYAHTLALYHG 231



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>OR8K5_HUMAN (Q8NH50) Olfactory receptor 8K5|
          Length = 307

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -2

Query: 241 PLFFEAMESLIK*VTGNLRMDIPSKLFSYEHTPVLF 134
           PLF   +   +  V GNL M I +KL S+ HTP+ F
Sbjct: 26  PLFGVFLVIYLITVVGNLTMIILTKLDSHLHTPMYF 61



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>YFC3_SCHPO (O14138) Hypothetical protein C25A8.03c in chromosome I|
          Length = 467

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = -3

Query: 135 FMEVSVNCIVLLLCYFYFTVFKLLVSWFQNFLGILILDIL 16
           F E   N +VL     YF VF L +  F +  GI+ LDIL
Sbjct: 130 FSESISNYLVLQYKLRYFPVFDLKIYDFHSGTGIIALDIL 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,067,794
Number of Sequences: 219361
Number of extensions: 513069
Number of successful extensions: 1152
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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