>gb|AY029259.1| Hordeum vulgare alpha-L-arabinofuranosidase/beta-D-xylosidase
            isoenzyme ARA-I mRNA, complete cds
          Length = 2647

 Score =  486 bits (245), Expect = e-134
 Identities = 254/257 (98%)
 Strand = Plus / Minus

                                                                        
Query: 88   tttacagttgcaaatcgtccctccaattccaaacgaataaaatcaaatttaacaaccgca 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2634 tttacagttgcaaatcgtccctccaattccaaacgaataaaatcaaatttaacaaccgca 2575

                                                                        
Query: 148  acaaaacaactcccaaagcctcccgtggatccaattctttcttgtcccaacgaaaggccc 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2574 acaaaacaactcccaaagcctcccgtggatccaattctttcttgtcccaacgaaaggccc 2515

                                                                        
Query: 208  atttggttatttcacctcccttaaatcaattcctacggcccattaccccggtcggcccat 267
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2514 atttggttatttcacctcccttaaatcgattcctacggcccattaccccggtcggcccat 2455

                                                                        
Query: 268  ccaattccatcttctttttcccctatcaaatgaaatcgaccctccctacgtggaattttt 327
            |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||
Sbjct: 2454 ccaattccatcttctttttcccctatcaaatgaaatcgattctccctacgtggaattttt 2395

                             
Query: 328  ctgatcaccgtcgatca 344
            |||||||||||||||||
Sbjct: 2394 ctgatcaccgtcgatca 2378

>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the 3'
              end of a novel gene (4933412J03Rik), a
              glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene,
              the Tnfsf15 gene for tumor necrosis factor (ligand)
              superfamily member 15 and the 3' end of the Tnfsf8 for
              tumor necrosis factor (ligand) superfamily member 8,
              complete sequence
          Length = 212420

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 278    cttctttttcccctatcaaatg 299
              ||||||||||||||||||||||
Sbjct: 201544 cttctttttcccctatcaaatg 201565

>gb|AC112494.2| Homo sapiens X BAC RP11-1L9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 155681

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 264    ccatccaattccatcttcttt 284
              |||||||||||||||||||||
Sbjct: 119520 ccatccaattccatcttcttt 119500

>emb|AL353730.13| Human DNA sequence from clone RP11-55P9 on chromosome 9, complete
             sequence
          Length = 147810

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   aataaaatcaaatttaacaac 143
             |||||||||||||||||||||
Sbjct: 56521 aataaaatcaaatttaacaac 56541

>gb|AC108734.10| Homo sapiens 3 BAC RP11-259P15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125990

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 129    atcaaatttaacaaccgcaacaaaa 153
              ||||||||||||||| |||||||||
Sbjct: 102960 atcaaatttaacaacagcaacaaaa 102984

>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
              complete sequence
          Length = 153643

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 89     ttacagttgcaaatcgtccctccaa 113
              |||||||||||||||| ||||||||
Sbjct: 141858 ttacagttgcaaatcgaccctccaa 141882

>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
             complete sequence
          Length = 126659

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 89    ttacagttgcaaatcgtccctccaa 113
             |||||||||||||||| ||||||||
Sbjct: 18145 ttacagttgcaaatcgaccctccaa 18169

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 89       ttacagttgcaaatcgtccctccaa 113
                |||||||||||||||| ||||||||
Sbjct: 32623124 ttacagttgcaaatcgaccctccaa 32623148

>emb|BX247870.5| Zebrafish DNA sequence from clone RP71-24B12 in linkage group 14,
             complete sequence
          Length = 148854

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 151   aaacaactcccaaagcctccc 171
             |||||||||||||||||||||
Sbjct: 80405 aaacaactcccaaagcctccc 80385

>dbj|AK101782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033065A06, full
            insert sequence
          Length = 2821

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 89   ttacagttgcaaatcgtccctccaa 113
            |||||||||||||||| ||||||||
Sbjct: 2721 ttacagttgcaaatcgaccctccaa 2697

>dbj|AK071973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088J07, full
            insert sequence
          Length = 1746

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 89   ttacagttgcaaatcgtccctccaa 113
            |||||||||||||||| ||||||||
Sbjct: 1682 ttacagttgcaaatcgaccctccaa 1658

>gb|U33007.1|SCD9461 Saccharomyces cerevisiae chromosome IV lambda 3641 and cosmids 9461,
             9831, and 9410
          Length = 78500

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   ccatcttctttttcccctatc 294
             |||||||||||||||||||||
Sbjct: 42258 ccatcttctttttcccctatc 42278

>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete
               sequence
          Length = 1783081

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 272     ttccatcttctttttcccctatca 295
               ||||||||| ||||||||||||||
Sbjct: 1304518 ttccatcttttttttcccctatca 1304495

>gb|AC146004.3| Pan troglodytes BAC clone RP43-161E12 from 7, complete sequence
          Length = 129417

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   aaaacaactcccaaagcctc 169
             ||||||||||||||||||||
Sbjct: 50042 aaaacaactcccaaagcctc 50061

>gb|AC005030.1| Homo sapiens BAC clone GS1-589P19 from 7, complete sequence
          Length = 148915

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   aaaacaactcccaaagcctc 169
             ||||||||||||||||||||
Sbjct: 67838 aaaacaactcccaaagcctc 67857

>ref|XM_570495.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CND04750) partial mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 ttccatcttctttttcccctatca 295
           ||||||||| ||||||||||||||
Sbjct: 102 ttccatcttttttttcccctatca 125

>emb|BX255915.13| Zebrafish DNA sequence from clone CH211-245L1 in linkage group 5,
            complete sequence
          Length = 157382

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 117  caaacgaataaaatcaaatt 136
            ||||||||||||||||||||
Sbjct: 3795 caaacgaataaaatcaaatt 3814

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     aataaaatcaaatttaacaa 142
               ||||||||||||||||||||
Sbjct: 2271224 aataaaatcaaatttaacaa 2271243

>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0535G04
          Length = 154180

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    aataaaatcaaatttaacaa 142
              ||||||||||||||||||||
Sbjct: 130681 aataaaatcaaatttaacaa 130700

>emb|AL954168.6| Zebrafish DNA sequence from clone DKEY-3I24 in linkage group 17,
             complete sequence
          Length = 205011

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 109   tccaattccaaacgaataaaatcaaatt 136
             ||||||||||||| ||||||||||||||
Sbjct: 40013 tccaattccaaac-aataaaatcaaatt 39987

>gb|AY112378.1| Zea mays CL47610_1 mRNA sequence
          Length = 676

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 169 cccgtggatccaattctttc 188
           ||||||||||||||||||||
Sbjct: 216 cccgtggatccaattctttc 235


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,633,824
Number of Sequences: 3902068
Number of extensions: 3633824
Number of successful extensions: 67818
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 67736
Number of HSP's gapped (non-prelim): 84
length of query: 344
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 322
effective length of database: 17,147,199,772
effective search space: 5521398326584
effective search space used: 5521398326584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)