>ref|XM_465561.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3440

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 400  agttgatcttgggctttggcctccttggt 428
            ||||||||||||||||||||| |||||||
Sbjct: 2990 agttgatcttgggctttggccgccttggt 2962

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 400      agttgatcttgggctttggcctccttggt 428
                ||||||||||||||||||||| |||||||
Sbjct: 15955555 agttgatcttgggctttggccgccttggt 15955527

>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_F01
          Length = 120026

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 400   agttgatcttgggctttggcctccttggt 428
             ||||||||||||||||||||| |||||||
Sbjct: 99230 agttgatcttgggctttggccgccttggt 99202

>dbj|AK066401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063N21, full
            insert sequence
          Length = 3439

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 400  agttgatcttgggctttggcctccttggt 428
            ||||||||||||||||||||| |||||||
Sbjct: 2989 agttgatcttgggctttggccgccttggt 2961

>dbj|AK061709.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F12, full
            insert sequence
          Length = 1824

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 400  agttgatcttgggctttggcctccttggt 428
            ||||||||||||||||||||| |||||||
Sbjct: 1414 agttgatcttgggctttggccgccttggt 1386

>ref|NM_204546.2| Gallus gallus RAD52 motif 1 (RDM1), mRNA
          Length = 1411

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 127  aaaattaggcccaaaaatgtatgc 150
            ||||||||||||||||||||||||
Sbjct: 998  aaaattaggcccaaaaatgtatgc 1021

>dbj|AB248100.1| Gallus gallus RDM1 gene for RAD52 motif 1, complete cds
          Length = 5599

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 127  aaaattaggcccaaaaatgtatgc 150
            ||||||||||||||||||||||||
Sbjct: 4408 aaaattaggcccaaaaatgtatgc 4431

>dbj|AB080727.1| Gallus gallus mRNA for RDM1, complete cds
          Length = 1433

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 127  aaaattaggcccaaaaatgtatgc 150
            ||||||||||||||||||||||||
Sbjct: 998  aaaattaggcccaaaaatgtatgc 1021

>gb|AC098576.7| Drosophila melanogaster X BAC RP98-3E12 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 175262

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   gcatcatccagtgcatgttta 169
             |||||||||||||||||||||
Sbjct: 80134 gcatcatccagtgcatgttta 80114

>gb|AE003421.2| Drosophila melanogaster chromosome X, section 5 of 74 of the complete
              sequence
          Length = 304204

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 149    gcatcatccagtgcatgttta 169
              |||||||||||||||||||||
Sbjct: 287937 gcatcatccagtgcatgttta 287917

>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 408     ttgggctttggcctccttggt 428
               |||||||||||||||||||||
Sbjct: 2749921 ttgggctttggcctccttggt 2749901

>emb|AL030994.1|DMC4F1 Drosophila melanogaster cosmid clone 4F1
          Length = 44352

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   gcatcatccagtgcatgttta 169
             |||||||||||||||||||||
Sbjct: 20473 gcatcatccagtgcatgttta 20453

>gb|AC102376.14| Mus musculus chromosome 18, clone RP23-314H11, complete sequence
          Length = 190153

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 286    tgcttgagtctgtcttgtag 305
              ||||||||||||||||||||
Sbjct: 132601 tgcttgagtctgtcttgtag 132620

>gb|AC125141.4| Mus musculus BAC clone RP24-333C3 from chromosome 17, complete sequence
          Length = 148447

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   tctgtcttgtagccctttta 313
             ||||||||||||||||||||
Sbjct: 74368 tctgtcttgtagccctttta 74349

>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence
          Length = 196646

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     aggactcagggtaaaatgaa 80
              ||||||||||||||||||||
Sbjct: 122288 aggactcagggtaaaatgaa 122307

>gb|AC091204.3| Drosophila melanogaster 3L NOVECTOR RP98-27G13 (Roswell Park Cancer
              Institute Drosophila BAC Library) complete sequence
          Length = 185825

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    aaaattactatgctcagttg 404
              ||||||||||||||||||||
Sbjct: 122074 aaaattactatgctcagttg 122093

>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5,
            complete sequence
          Length = 156095

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  catccagtgcatgtttacac 172
            ||||||||||||||||||||
Sbjct: 1074 catccagtgcatgtttacac 1093

>gb|AC018472.30| Homo sapiens 3 BAC RP11-402L6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 101179

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 365   caaactgtgtacccaagttgaaaattac 392
             |||| ||||||||| |||||||||||||
Sbjct: 83260 caaaatgtgtaccccagttgaaaattac 83233

>gb|AC103716.2| Homo sapiens chromosome 8, clone RP11-344I13, complete sequence
          Length = 180624

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    ttgatcttgggctttggcct 421
              ||||||||||||||||||||
Sbjct: 155198 ttgatcttgggctttggcct 155179

>gb|AC093419.2| Homo sapiens chromosome 1 clone RP11-135A15, complete sequence
          Length = 163209

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   ttccatgtcagctcttctaa 195
             ||||||||||||||||||||
Sbjct: 38608 ttccatgtcagctcttctaa 38589

>gb|AC093561.2| Homo sapiens chromosome 1 clone RP11-401A10, complete sequence
          Length = 184330

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  ttccatgtcagctcttctaa 195
            ||||||||||||||||||||
Sbjct: 1288 ttccatgtcagctcttctaa 1307

>gb|AC103953.8| Homo sapiens chromosome 8, clone CTD-2571K21, complete sequence
          Length = 216373

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   ttgatcttgggctttggcct 421
             ||||||||||||||||||||
Sbjct: 75062 ttgatcttgggctttggcct 75043

>gb|AC129959.6| Bos taurus, clone RP42-518P7, complete sequence
          Length = 211988

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   ttgatcttgggctttggcct 421
             ||||||||||||||||||||
Sbjct: 56254 ttgatcttgggctttggcct 56235

>gb|AE003557.4| Drosophila melanogaster chromosome 3L, section 28 of 83 of the complete
              sequence
          Length = 287988

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    aaaattactatgctcagttg 404
              ||||||||||||||||||||
Sbjct: 229875 aaaattactatgctcagttg 229894


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,810,642
Number of Sequences: 3902068
Number of extensions: 3810642
Number of successful extensions: 65029
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64978
Number of HSP's gapped (non-prelim): 51
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)