>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence
          Length = 202294

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 257   aataaaaatgtttttggatgaa 278
             ||||||||||||||||||||||
Sbjct: 56757 aataaaaatgtttttggatgaa 56736

>ref|XM_464147.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3121

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 402  tccctcactcctcgtggtattccgggttct 431
            |||||||||||||||  |||||||||||||
Sbjct: 2770 tccctcactcctcgttatattccgggttct 2741

>ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.11 mRNA
          Length = 3169

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 402  tccctcactcctcgtggtattccgggttct 431
            |||||||||||||||  |||||||||||||
Sbjct: 2777 tccctcactcctcgttatattccgggttct 2748

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 402     tccctcactcctcgtggtattccgggttct 431
               |||||||||||||||  |||||||||||||
Sbjct: 2570749 tccctcactcctcgttatattccgggttct 2570720

>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_C03
          Length = 103297

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 402   tccctcactcctcgtggtattccgggttct 431
             |||||||||||||||  |||||||||||||
Sbjct: 49532 tccctcactcctcgttatattccgggttct 49503

>dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108C09, full
            insert sequence
          Length = 3120

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 402  tccctcactcctcgtggtattccgggttct 431
            |||||||||||||||  |||||||||||||
Sbjct: 2769 tccctcactcctcgttatattccgggttct 2740

>dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B03, full
            insert sequence
          Length = 3169

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 402  tccctcactcctcgtggtattccgggttct 431
            |||||||||||||||  |||||||||||||
Sbjct: 2777 tccctcactcctcgttatattccgggttct 2748

>gb|AC163094.5| Mus musculus chromosome 5, clone RP23-123P10, complete sequence
          Length = 208850

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   tacacacttgatacatataca 128
             |||||||||||||||||||||
Sbjct: 48749 tacacacttgatacatataca 48729

>emb|CR352209.10| Zebrafish DNA sequence from clone DKEY-150O13 in linkage group 24,
              complete sequence
          Length = 143425

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 110    cacacttgatacatatacaaa 130
              |||||||||||||||||||||
Sbjct: 114349 cacacttgatacatatacaaa 114369



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 110    cacacttgatacatatacaaa 130
              |||||||||||||||||||||
Sbjct: 104510 cacacttgatacatatacaaa 104530

>emb|BX663612.9| Zebrafish DNA sequence from clone DKEY-24M14 in linkage group 7, complete
              sequence
          Length = 181415

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 110    cacacttgatacatatacaaa 130
              |||||||||||||||||||||
Sbjct: 154850 cacacttgatacatatacaaa 154830

>dbj|AK053276.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130006D24 product:unclassifiable, full
            insert sequence
          Length = 3651

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 108  tacacacttgatacatataca 128
            |||||||||||||||||||||
Sbjct: 2970 tacacacttgatacatataca 2990

>ref|NM_105369.1| Arabidopsis thaliana glycerophosphodiester phosphodiesterase/ kinase
            AT1G66980 mRNA, complete cds
          Length = 3512

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  taaaaatgtttttggatgaa 278
            ||||||||||||||||||||
Sbjct: 3459 taaaaatgtttttggatgaa 3440

>gb|AC164628.8| Mus musculus 6 BAC RP23-82H18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205032

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    acacacttgatacatataca 128
              ||||||||||||||||||||
Sbjct: 184660 acacacttgatacatataca 184679

>gb|AC121317.7| Mus musculus chromosome 6, clone RP24-343J20, complete sequence
          Length = 179807

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   acacacttgatacatataca 128
             ||||||||||||||||||||
Sbjct: 23843 acacacttgatacatataca 23862

>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete
             sequence
          Length = 90387

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   taaaaatgtttttggatgaa 278
             ||||||||||||||||||||
Sbjct: 27065 taaaaatgtttttggatgaa 27084

>emb|Z93397.1|CEZC482 Caenorhabditis elegans Cosmid ZC482, complete sequence
          Length = 36302

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aaactccacaaaaaattaac 25
             ||||||||||||||||||||
Sbjct: 20467 aaactccacaaaaaattaac 20448

>ref|XM_731938.1| Plasmodium chabaudi chabaudi hypothetical protein (PC101680.00.0)
           partial mRNA
          Length = 287

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 acatatacaaataagcttaa 139
           ||||||||||||||||||||
Sbjct: 213 acatatacaaataagcttaa 232

>ref|XM_732666.1| Plasmodium chabaudi chabaudi hypothetical protein (PC105151.00.0)
           partial mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 cacttgatacatatacaaat 131
           ||||||||||||||||||||
Sbjct: 599 cacttgatacatatacaaat 618

>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome
          Length = 1166239

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 9      ctccacaaaaaattaacgag 28
              ||||||||||||||||||||
Sbjct: 718474 ctccacaaaaaattaacgag 718493

>gb|AC107976.4| Homo sapiens chromosome 15, clone CTD-2576F9, complete sequence
          Length = 131548

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    cagttctaaagatgtaactt 103
             ||||||||||||||||||||
Sbjct: 64502 cagttctaaagatgtaactt 64521

>emb|BX294171.10| Zebrafish DNA sequence from clone DKEY-263M10 in linkage group 1,
             complete sequence
          Length = 121187

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   ctccaaaaacttgcatcaga 384
             ||||||||||||||||||||
Sbjct: 30564 ctccaaaaacttgcatcaga 30545

>gb|AC090943.3| Homo sapiens chromosome 3 clone RP11-22O15 map 3p, complete sequence
          Length = 162949

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    atgccgaggtgtaagagcat 308
              ||||||||||||||||||||
Sbjct: 107859 atgccgaggtgtaagagcat 107878

>gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complete sequence
          Length = 151297

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   tccctcactcctcgtggtat 421
             ||||||||||||||||||||
Sbjct: 66748 tccctcactcctcgtggtat 66729

>gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, complete sequence
          Length = 162101

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    cagttctaaagatgtaactt 103
             ||||||||||||||||||||
Sbjct: 67063 cagttctaaagatgtaactt 67044

>gb|AC091291.2| Homo sapiens chromosome 3 clone RP11-654A18 map 3p, complete sequence
          Length = 184579

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   atgccgaggtgtaagagcat 308
             ||||||||||||||||||||
Sbjct: 65374 atgccgaggtgtaagagcat 65393

>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12,
              complete sequence
          Length = 177468

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    taaaaatgtttttggatgaa 278
              ||||||||||||||||||||
Sbjct: 161862 taaaaatgtttttggatgaa 161843

>emb|AL672058.5| Zebrafish DNA sequence from clone BUSM1-47J20 in linkage group 1,
              complete sequence
          Length = 130339

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 365    ctccaaaaacttgcatcaga 384
              ||||||||||||||||||||
Sbjct: 100541 ctccaaaaacttgcatcaga 100560

>emb|CR556696.19| Zebrafish DNA sequence from clone CH211-80J13 in linkage group 20,
             complete sequence
          Length = 130645

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    tgtgctagtgaatgacaacg 77
             ||||||||||||||||||||
Sbjct: 71131 tgtgctagtgaatgacaacg 71112

>emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 in linkage group 5,
             complete sequence
          Length = 209796

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   tacacacttgatacatatac 127
             ||||||||||||||||||||
Sbjct: 49955 tacacacttgatacatatac 49936

>gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complete sequence
          Length = 131867

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tttttggatgaaccaccagc 286
             ||||||||||||||||||||
Sbjct: 64488 tttttggatgaaccaccagc 64507

>dbj|AP006372.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT36C05, TM0215b,
             complete sequence
          Length = 84914

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    acatactgtgctagtgaatgacaa 75
             |||||||||| |||||||||||||
Sbjct: 74278 acatactgtgttagtgaatgacaa 74255

>dbj|AP004546.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43N05, TM0178,
             complete sequence
          Length = 97268

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 52    acatactgtgctagtgaatgacaa 75
             |||||||||| |||||||||||||
Sbjct: 40708 acatactgtgttagtgaatgacaa 40685

>emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chromosome 2, complete
             sequence
          Length = 151493

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   aataaaaatgtttttggatg 276
             ||||||||||||||||||||
Sbjct: 61609 aataaaaatgtttttggatg 61590

>emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chromosome 11, complete
             sequence
          Length = 221374

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   acacacttgatacatataca 128
             ||||||||||||||||||||
Sbjct: 64556 acacacttgatacatataca 64575


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,219,095
Number of Sequences: 3902068
Number of extensions: 4219095
Number of successful extensions: 73923
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73815
Number of HSP's gapped (non-prelim): 108
length of query: 431
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 409
effective length of database: 17,147,199,772
effective search space: 7013204706748
effective search space used: 7013204706748
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)