ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl21a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL831764.16| Mouse DNA sequence from clone RP23-203A3 on chr... 48 0.025
2gb|DQ228341.1| Solanum tuberosum clone 147E09 proteasome-like pr... 46 0.10
3gb|DQ191644.1| Solanum tuberosum proteasome, alpha subunit-like ... 46 0.10
4emb|Y14339.1|LEY14339 Lycopersicon esculentum mRNA for proteasom... 46 0.10
5gb|AC096866.2| Takifugu rubripes clone 247M18, complete sequence 46 0.10
6gb|DQ284492.1| Solanum tuberosum clone 047F04 proteasome-like pr... 46 0.10
7ref|XM_594153.2| PREDICTED: Bos taurus similar to chromosome 17 ... 42 1.6
8ref|XM_586217.2| PREDICTED: Bos taurus similar to chromosome 17 ... 42 1.6
9gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete se... 42 1.6
10gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete s... 42 1.6
11emb|AL137067.7| Human DNA sequence from clone RP11-13B9 on chrom... 42 1.6
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
13dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
14gb|AC121149.12| Mus musculus chromosome 3, clone RP24-383A4, com... 40 6.2
15gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
16gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 6.2
17gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
18gb|AC022682.16| Mus musculus chromosome 13, clone RP23-476E21, c... 40 6.2
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
20gb|AC115683.2| Dictyostelium discoideum chromosome 2 map complem... 40 6.2
21gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genom... 40 6.2
22gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete ... 40 6.2
23gb|AC119413.16| Medicago truncatula clone mth2-19p2, complete se... 40 6.2
24emb|CR954195.2| Medicago truncatula chromosome 5 clone mth2-16p1... 40 6.2
25emb|AL358119.12| Human DNA sequence from clone RP11-331P7 on chr... 40 6.2
26emb|AL359272.9| Human DNA sequence from clone RP11-554P16 on chr... 40 6.2
27emb|AL356433.19| Human DNA sequence from clone RP11-453F1 on chr... 40 6.2
28gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genom... 40 6.2
29emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
30emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
31emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
32emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
33emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
34emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
35gb|AC113336.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.2
36gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
37gb|DP000061.1| Monodelphis domestica target 117 genomic scaffold 40 6.2
38gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.2
39gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.2
40gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, com... 40 6.2
41gb|AC098566.3| Oryza sativa chromosome 10 clone OSJNBa0051J07, c... 40 6.2
42gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genom... 40 6.2
43dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
44gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, co... 40 6.2
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
47dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
49dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
50dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
51emb|AL731580.3|OSJN00227 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
52gb|AC069154.5| Homo sapiens BAC clone RP11-689F8 from 2, complet... 40 6.2
53gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
54gb|AC153136.3| Mus musculus BAC clone RP24-191P11 from chromosom... 40 6.2
55gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, comple... 40 6.2
56gb|AC092584.2| Homo sapiens BAC clone RP11-20H7 from 2, complete... 40 6.2
57gb|AF112541.1|AF112541 HIV-1 isolate 08108v3 from USA, envelope ... 40 6.2
58dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
59dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
60gb|AC104061.5| Homo sapiens BAC clone RP11-5E24 from 2, complete... 40 6.2
61dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
62dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
63dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
64dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
65dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
66dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
67dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
68dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
69dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
70dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
71dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
72dbj|AP005051.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
73dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
74dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
75dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
76gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
77emb|BX004877.10| Zebrafish DNA sequence from clone DKEY-7L19 in ... 40 6.2
78gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
79emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.2
80emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
81emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
82emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
83emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584... 40 6.2
84emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.2
85emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
86emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4,... 40 6.2
87emb|CT010477.16| Mouse DNA sequence from clone RP23-361M19 on ch... 40 6.2
88gb|AC122315.5| Mus musculus BAC clone RP23-302P6 from 10, comple... 40 6.2
89gb|AC155715.24| Mus musculus 10 BAC RP24-118H2 (Roswell Park Can... 40 6.2
90gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2 
>emb|AL831764.16| Mouse DNA sequence from clone RP23-203A3 on chromosome 2, complete
              sequence
          Length = 195821

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 381    catcaatttcagcttcctcaagtg 404
              ||||||||||||||||||||||||
Sbjct: 156928 catcaatttcagcttcctcaagtg 156951
to top
>gb|DQ228341.1| Solanum tuberosum clone 147E09 proteasome-like protein alpha
           subunit mRNA, complete cds
          Length = 1022

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 381 catcaatttcagcttcctcaagt 403
           |||||||||||||||||||||||
Sbjct: 775 catcaatttcagcttcctcaagt 753
to top
>gb|DQ191644.1| Solanum tuberosum proteasome, alpha subunit-like protein mRNA,
           complete cds
          Length = 1006

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 381 catcaatttcagcttcctcaagt 403
           |||||||||||||||||||||||
Sbjct: 755 catcaatttcagcttcctcaagt 733
to top
>emb|Y14339.1|LEY14339 Lycopersicon esculentum mRNA for proteasome, alpha subunit
          Length = 1686

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 381 catcaatttcagcttcctcaagt 403
           |||||||||||||||||||||||
Sbjct: 759 catcaatttcagcttcctcaagt 737
to top
>gb|AC096866.2| Takifugu rubripes clone 247M18, complete sequence
          Length = 53580

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 77    acccaaactgcagaaatgatgat 99
             |||||||||||||||||||||||
Sbjct: 35119 acccaaactgcagaaatgatgat 35141
to top
>gb|DQ284492.1| Solanum tuberosum clone 047F04 proteasome-like protein alpha
           subunit-like mRNA, complete cds
          Length = 967

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 381 catcaatttcagcttcctcaagt 403
           |||||||||||||||||||||||
Sbjct: 759 catcaatttcagcttcctcaagt 737
to top
>ref|XM_594153.2| PREDICTED: Bos taurus similar to chromosome 17 open reading frame 27
            (LOC516023), partial mRNA
          Length = 3436

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 348  agccttctctgcccaagtctc 368
            |||||||||||||||||||||
Sbjct: 3111 agccttctctgcccaagtctc 3091
to top
>ref|XM_586217.2| PREDICTED: Bos taurus similar to chromosome 17 open reading frame 27
             (LOC509283), mRNA
          Length = 12608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   agccttctctgcccaagtctc 368
             |||||||||||||||||||||
Sbjct: 12264 agccttctctgcccaagtctc 12244
to top
>gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete sequence
          Length = 92346

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 362   aagtctcaacaacataattca 382
             |||||||||||||||||||||
Sbjct: 43224 aagtctcaacaacataattca 43244
to top
>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence
          Length = 105045

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   aagtctcaacaacataattca 382
             |||||||||||||||||||||
Sbjct: 30955 aagtctcaacaacataattca 30935
to top
>emb|AL137067.7| Human DNA sequence from clone RP11-13B9 on chromosome 9q22.32-31.3
              Contains a gene for a novel protein similar to a
              glycosyltransferase, the gene for protein translocation
              complex beta (SEC61B), a novel gene for a protein similar
              to cytokeratin 8 (KRT8)and a CpG island, complete sequence
          Length = 197169

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 246    gcaatggaaagcaacacaaag 266
              |||||||||||||||||||||
Sbjct: 129968 gcaatggaaagcaacacaaag 129948
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 198      ttcatatacgaatgacaaaactaaa 222
                ||||||||||||||| |||||||||
Sbjct: 26117500 ttcatatacgaatgaaaaaactaaa 26117524



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 13917458 ataattcatcaatttcagct 13917477



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 10963640 ataattcatcaatttcagct 10963659



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 6913753 ataattcatcaatttcagct 6913772



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 6871801 ataattcatcaatttcagct 6871782



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 6814960 ataattcatcaatttcagct 6814941



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 3709024 ataattcatcaatttcagct 3709043
to top
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062J02
          Length = 151636

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 198   ttcatatacgaatgacaaaactaaa 222
             ||||||||||||||| |||||||||
Sbjct: 96745 ttcatatacgaatgaaaaaactaaa 96769
to top
>gb|AC121149.12| Mus musculus chromosome 3, clone RP24-383A4, complete sequence
          Length = 172369

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     aattacctttagcaaaagaa 28
             ||||||||||||||||||||
Sbjct: 48744 aattacctttagcaaaagaa 48763
to top
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0095J15, complete sequence
          Length = 156023

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 98147 ataattcatcaatttcagct 98128
to top
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 81      aaactgcagaaatgatgatt 100
               ||||||||||||||||||||
Sbjct: 2341445 aaactgcagaaatgatgatt 2341426
to top
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09,
              complete sequence
          Length = 159600

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 150703 ataattcatcaatttcagct 150722
to top
>gb|AC022682.16| Mus musculus chromosome 13, clone RP23-476E21, complete sequence
          Length = 183905

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   aacacaaagcaccctaaaag 277
             ||||||||||||||||||||
Sbjct: 10741 aacacaaagcaccctaaaag 10760
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 20806494 ataattcatcaatttcagct 20806475



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 158      aacagaaaaaacagcacaag 177
                ||||||||||||||||||||
Sbjct: 17023442 aacagaaaaaacagcacaag 17023461



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 14600070 ataattcatcaatttcagct 14600051



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 11564936 ataattcatcaatttcagct 11564917



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 4776719 ataattcatcaatttcagct 4776738



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 4652957 ataattcatcaatttcagct 4652976
to top
>gb|AC115683.2| Dictyostelium discoideum chromosome 2 map complement(6135149-6105997)
             strain AX4, complete sequence
          Length = 29150

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   tcaacaacataattcatcaa 386
             ||||||||||||||||||||
Sbjct: 19940 tcaacaacataattcatcaa 19959
to top
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete
             sequence
          Length = 157662

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   aacagaaaaaacagcacaag 177
             ||||||||||||||||||||
Sbjct: 54188 aacagaaaaaacagcacaag 54207
to top
>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence
          Length = 129921

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   tcaacaacataattcatcaa 386
             ||||||||||||||||||||
Sbjct: 60175 tcaacaacataattcatcaa 60194
to top
>gb|AC119413.16| Medicago truncatula clone mth2-19p2, complete sequence
          Length = 113431

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     gacaaaattacctttagcaa 23
             ||||||||||||||||||||
Sbjct: 49980 gacaaaattacctttagcaa 49961
to top
>emb|CR954195.2| Medicago truncatula chromosome 5 clone mth2-16p13, COMPLETE SEQUENCE
          Length = 116834

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     gacaaaattacctttagcaa 23
             ||||||||||||||||||||
Sbjct: 93340 gacaaaattacctttagcaa 93321
to top
>emb|AL358119.12| Human DNA sequence from clone RP11-331P7 on chromosome 1, complete
              sequence
          Length = 157124

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    acagcacaagccatcaggaa 187
              ||||||||||||||||||||
Sbjct: 145672 acagcacaagccatcaggaa 145691
to top
>emb|AL359272.9| Human DNA sequence from clone RP11-554P16 on chromosome X Contains the
             5' end of gene KIAA1202 and a CpG island, complete
             sequence
          Length = 173510

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    ccaaaaaaggcaacagcatt 58
             ||||||||||||||||||||
Sbjct: 16584 ccaaaaaaggcaacagcatt 16603
to top
>emb|AL356433.19| Human DNA sequence from clone RP11-453F1 on chromosome 10 Contains
             three CpG islands, complete sequence
          Length = 159810

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   gccatcaggaaaacaacaaa 196
             ||||||||||||||||||||
Sbjct: 38768 gccatcaggaaaacaacaaa 38787
to top
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete
             sequence
          Length = 147130

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 57641 ataattcatcaatttcagct 57660
to top
>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06,
              complete sequence
          Length = 174570

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 168056 ataattcatcaatttcagct 168075
to top
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
              complete sequence
          Length = 144778

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 131423 ataattcatcaatttcagct 131442
to top
>emb|AL606695.3|OSJN00112 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0103I08,
             complete sequence
          Length = 140449

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 37778 ataattcatcaatttcagct 37759
to top
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
             complete sequence
          Length = 148023

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 93355 ataattcatcaatttcagct 93374
to top
>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07,
             complete sequence
          Length = 143585

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 14696 ataattcatcaatttcagct 14715
to top
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09,
              complete sequence
          Length = 159502

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 129284 ataattcatcaatttcagct 129303
to top
>gb|AC113336.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0011A24, from chromosome 10, complete sequence
          Length = 176832

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 164850 ataattcatcaatttcagct 164831
to top
>gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050E08,
              complete sequence
          Length = 180499

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 133989 ataattcatcaatttcagct 134008
to top
>gb|DP000061.1| Monodelphis domestica target 117 genomic scaffold
          Length = 360990

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    aggaaaacaacaaaattcat 202
              ||||||||||||||||||||
Sbjct: 343066 aggaaaacaacaaaattcat 343085
to top
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 115508 ataattcatcaatttcagct 115489
to top
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0019D17, from chromosome 3, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 58736 ataattcatcaatttcagct 58717
to top
>gb|AC164078.4| Mus musculus chromosome 3, clone RP23-123C15, complete sequence
          Length = 188095

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      aattacctttagcaaaagaa 28
              ||||||||||||||||||||
Sbjct: 118867 aattacctttagcaaaagaa 118848
to top
>gb|AC098566.3| Oryza sativa chromosome 10 clone OSJNBa0051J07, complete sequence
          Length = 148301

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ataattcatcaatttcagct 394
            ||||||||||||||||||||
Sbjct: 6525 ataattcatcaatttcagct 6506
to top
>gb|AC134887.4| Oryza sativa chromosome 3 BAC OSJNBa0029P07 genomic sequence, complete
             sequence
          Length = 142047

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 96777 ataattcatcaatttcagct 96758
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 34887242 ataattcatcaatttcagct 34887261



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 33547427 ataattcatcaatttcagct 33547408



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 32359701 ataattcatcaatttcagct 32359720



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 30174629 ataattcatcaatttcagct 30174610



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 27095135 ataattcatcaatttcagct 27095116



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 26946996 ataattcatcaatttcagct 26947015



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 5658109 ataattcatcaatttcagct 5658128



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 335603 ataattcatcaatttcagct 335622
to top
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence
          Length = 198821

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     ctgcagaaatgatgatttgt 103
              ||||||||||||||||||||
Sbjct: 103833 ctgcagaaatgatgatttgt 103852
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 27028317 ataattcatcaatttcagct 27028336



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 18145480 ataattcatcaatttcagct 18145461



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 17592891 ataattcatcaatttcagct 17592910



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 10307868 ataattcatcaatttcagct 10307887
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 5226376 ataattcatcaatttcagct 5226357



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 4859570 ataattcatcaatttcagct 4859551



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 3852193 ataattcatcaatttcagct 3852212
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 20835261 ataattcatcaatttcagct 20835280



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 20091695 ataattcatcaatttcagct 20091714



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 10809545 ataattcatcaatttcagct 10809564



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 8813713 ataattcatcaatttcagct 8813732



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 7948138 ataattcatcaatttcagct 7948119
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 20799696 ataattcatcaatttcagct 20799677



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 158      aacagaaaaaacagcacaag 177
                ||||||||||||||||||||
Sbjct: 17017011 aacagaaaaaacagcacaag 17017030



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 14595045 ataattcatcaatttcagct 14595026



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 11561699 ataattcatcaatttcagct 11561680



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 4776834 ataattcatcaatttcagct 4776853



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 4653072 ataattcatcaatttcagct 4653091
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 21900373 ataattcatcaatttcagct 21900354
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 36410154 ataattcatcaatttcagct 36410173



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 36080970 ataattcatcaatttcagct 36080989



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 23247680 ataattcatcaatttcagct 23247661



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 14837956 ataattcatcaatttcagct 14837975



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 74       ttaacccaaactgcagaaat 93
                ||||||||||||||||||||
Sbjct: 11285955 ttaacccaaactgcagaaat 11285936
to top
>emb|AL731580.3|OSJN00227 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0001M07,
            complete sequence
          Length = 114335

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 375  ataattcatcaatttcagct 394
            ||||||||||||||||||||
Sbjct: 1914 ataattcatcaatttcagct 1933
to top
>gb|AC069154.5| Homo sapiens BAC clone RP11-689F8 from 2, complete sequence
          Length = 167132

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    caggaaaacaacaaaattca 201
              ||||||||||||||||||||
Sbjct: 166391 caggaaaacaacaaaattca 166372
to top
>gb|AC146468.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0008D12
              map MAP_LOC, complete sequence
          Length = 167323

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 115849 ataattcatcaatttcagct 115868
to top
>gb|AC153136.3| Mus musculus BAC clone RP24-191P11 from chromosome 10, complete sequence
          Length = 199200

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    caacaacataattcatcaat 387
              ||||||||||||||||||||
Sbjct: 152669 caacaacataattcatcaat 152650
to top
>gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, complete sequence
          Length = 201971

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 247    caatggaaagcaacacaaagcacc 270
              ||||||||||||| ||||||||||
Sbjct: 167668 caatggaaagcaatacaaagcacc 167645
to top
>gb|AC092584.2| Homo sapiens BAC clone RP11-20H7 from 2, complete sequence
          Length = 159035

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     gaaggtgacatacccaaaaaaggc 49
              |||||| |||||||||||||||||
Sbjct: 111915 gaaggttacatacccaaaaaaggc 111892
to top
>gb|AF112541.1|AF112541 HIV-1 isolate 08108v3 from USA, envelope glycoprotein (env) gene,
           partial cds
          Length = 2521

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 cgtgcaatggaaagcaacacaaag 266
           ||||||||| ||||||||||||||
Sbjct: 349 cgtgcaatgtaaagcaacacaaag 326
to top
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0408C03
          Length = 141273

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 93695 ataattcatcaatttcagct 93714
to top
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0005H10
          Length = 142885

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 61993 ataattcatcaatttcagct 62012
to top
>gb|AC104061.5| Homo sapiens BAC clone RP11-5E24 from 2, complete sequence
          Length = 49373

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  caggaaaacaacaaaattca 201
            ||||||||||||||||||||
Sbjct: 1259 caggaaaacaacaaaattca 1240
to top
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0039D04
          Length = 184408

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 46051 ataattcatcaatttcagct 46070
to top
>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0501G08
          Length = 173505

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 47722 ataattcatcaatttcagct 47741
to top
>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0014B15
          Length = 158821

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 103252 ataattcatcaatttcagct 103271
to top
>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031J07
          Length = 172511

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 34678 ataattcatcaatttcagct 34697
to top
>dbj|AP003856.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0697D09
          Length = 158479

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 22782 ataattcatcaatttcagct 22801
to top
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0451D05
          Length = 148381

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 34422 ataattcatcaatttcagct 34403
to top
>dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0503E05
          Length = 168258

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 74000 ataattcatcaatttcagct 74019
to top
>dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0475H04
          Length = 143337

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    ttaacccaaactgcagaaat 93
             ||||||||||||||||||||
Sbjct: 73360 ttaacccaaactgcagaaat 73341
to top
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0525F01
          Length = 151668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 144639 ataattcatcaatttcagct 144620
to top
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0479H10
          Length = 139874

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 103278 ataattcatcaatttcagct 103297



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 61326 ataattcatcaatttcagct 61307



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ataattcatcaatttcagct 394
            ||||||||||||||||||||
Sbjct: 4485 ataattcatcaatttcagct 4466
to top
>dbj|AP005100.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0018O23
          Length = 142143

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 20304 ataattcatcaatttcagct 20323
to top
>dbj|AP005051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0458G06
          Length = 139109

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 43813 ataattcatcaatttcagct 43832
to top
>dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1657_A07
          Length = 125217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 56298 ataattcatcaatttcagct 56317
to top
>dbj|AP005114.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0689H05
          Length = 135803

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 83658 ataattcatcaatttcagct 83639
to top
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0418E08
          Length = 141040

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 64497 ataattcatcaatttcagct 64478
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 5227163 ataattcatcaatttcagct 5227144



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 4860391 ataattcatcaatttcagct 4860372



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     ataattcatcaatttcagct 394
               ||||||||||||||||||||
Sbjct: 3852114 ataattcatcaatttcagct 3852133
to top
>emb|BX004877.10| Zebrafish DNA sequence from clone DKEY-7L19 in linkage group 17, complete
              sequence
          Length = 249239

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 263    aaagcaccctaaaagttttg 282
              ||||||||||||||||||||
Sbjct: 241095 aaagcaccctaaaagttttg 241114
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 26953906 ataattcatcaatttcagct 26953925



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 18071801 ataattcatcaatttcagct 18071782



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 17547262 ataattcatcaatttcagct 17547281



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 375      ataattcatcaatttcagct 394
                ||||||||||||||||||||
Sbjct: 10307750 ataattcatcaatttcagct 10307769
to top
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135439

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 70787 ataattcatcaatttcagct 70806
to top
>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01,
              complete sequence
          Length = 162227

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 115316 ataattcatcaatttcagct 115335
to top
>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23,
             complete sequence
          Length = 115972

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 20263 ataattcatcaatttcagct 20282
to top
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 162200

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 85227 ataattcatcaatttcagct 85246
to top
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 131300

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 127920 ataattcatcaatttcagct 127901
to top
>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155927

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 99158 ataattcatcaatttcagct 99139
to top
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12,
             complete sequence
          Length = 186142

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 70920 ataattcatcaatttcagct 70901
to top
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13,
              complete sequence
          Length = 152264

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    ataattcatcaatttcagct 394
              ||||||||||||||||||||
Sbjct: 123716 ataattcatcaatttcagct 123697
to top
>emb|CT010477.16| Mouse DNA sequence from clone RP23-361M19 on chromosome 13, complete
              sequence
          Length = 192967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    aacacaaagcaccctaaaag 277
              ||||||||||||||||||||
Sbjct: 192887 aacacaaagcaccctaaaag 192906
to top
>gb|AC122315.5| Mus musculus BAC clone RP23-302P6 from 10, complete sequence
          Length = 197288

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    caacaacataattcatcaat 387
              ||||||||||||||||||||
Sbjct: 137125 caacaacataattcatcaat 137144
to top
>gb|AC155715.24| Mus musculus 10 BAC RP24-118H2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 174860

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    caaaactaaaccgctaaaac 232
              ||||||||||||||||||||
Sbjct: 155527 caaaactaaaccgctaaaac 155546
to top
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
             complete sequence
          Length = 148894

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ataattcatcaatttcagct 394
             ||||||||||||||||||||
Sbjct: 93912 ataattcatcaatttcagct 93931


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,589,755
Number of Sequences: 3902068
Number of extensions: 5589755
Number of successful extensions: 144051
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142774
Number of HSP's gapped (non-prelim): 1277
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top