Clone Name | rbastl20h12 |
---|---|
Clone Library Name | barley_pub |
>LYS1_ASHGO (Q75BV4) Saccharopine dehydrogenase [NAD+, L-lysine-forming] (EC| 1.5.1.7) (Lysine--2-oxoglutarate reductase) (SDH) Length = 372 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = -2 Query: 308 PWVLSQSTRTTAPIWSRTRRLMKCSCGRASGRTRI 204 P +L R TAP+W R + L + C R S R+ Sbjct: 338 PSLLQLPERDTAPVWLRAKELFQQHCERLSKEARL 372
>CP52J_CANMA (Q12588) Cytochrome P450 52A10 (EC 1.14.14.-) (CYPLIIA10)| (Alkane-inducible P450-ALK7) Length = 519 Score = 28.5 bits (62), Expect = 4.3 Identities = 19/66 (28%), Positives = 34/66 (51%) Frame = +2 Query: 83 IWT*ARASVIHSFQIITRKQKD*LTHEHLLLLAYMKSVSNESWFYLRPGRMSISSNDAFC 262 +W+ R + H F + + + + ++ E L L Y+K+V NE+ L P S+ N F Sbjct: 337 VWSKLRQEIGHKFGLDSYSRVEDISFELLKLCEYLKAVLNET-LRLYP---SVPRNARFA 392 Query: 263 SKSALL 280 +K+ L Sbjct: 393 AKNTTL 398
>DOME_DROME (Q9VWE0) Cytokine receptor precursor (Protein domeless)| Length = 1282 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = -3 Query: 136 PGDDLKAVNYTSSSLCPNWGF----DGERMVIWNCCFLLQNGFKPLRGP 2 PG +L +N T SS+C +W + R ++W QN F+P+ P Sbjct: 227 PGQNLTLLNRTESSVCLSWEMPRRSNYNRGLVWQVRVTPQN-FEPITRP 274
>Y1569_ARCFU (O28703) Hypothetical protein AF1569| Length = 259 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/64 (23%), Positives = 29/64 (45%) Frame = +2 Query: 152 LTHEHLLLLAYMKSVSNESWFYLRPGRMSISSNDAFCSKSALLSVLIETEPMDLLDMSCW 331 L E++ +++SVSN W++ R +S+ +A E +++ CW Sbjct: 170 LNLEYVTSGKFVRSVSNPQWYFRRVKHFILSAPAMGVGATAGYIAARSAEIESIIETVCW 229 Query: 332 TWGA 343 T+ A Sbjct: 230 TFRA 233
>TALA_POVJC (P03072) Large T antigen| Length = 688 Score = 27.3 bits (59), Expect = 9.6 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 6/67 (8%) Frame = +2 Query: 110 IHSFQIITRKQKD*LTHEHLLLLAYMKSVSNESW------FYLRPGRMSISSNDAFCSKS 271 + SF + T K+K + ++ L+ + +S + F+L P R +S+ + +C K Sbjct: 157 VASFAVYTTKEKAQILYKKLMEKYSVTFISRHGFGGHNILFFLTPHRHRVSAINNYCQKL 216 Query: 272 ALLSVLI 292 S LI Sbjct: 217 CTFSFLI 223
>LYS1_YEAST (P38998) Saccharopine dehydrogenase [NAD+, L-lysine-forming] (EC| 1.5.1.7) (Lysine--2-oxoglutarate reductase) (SDH) Length = 372 Score = 27.3 bits (59), Expect = 9.6 Identities = 10/27 (37%), Positives = 15/27 (55%) Frame = -2 Query: 284 RTTAPIWSRTRRLMKCSCGRASGRTRI 204 R TAP+W R ++L C R +R+ Sbjct: 346 RKTAPVWVRAKKLFDRHCARVKRSSRL 372
>BTD_MOUSE (Q8CIF4) Biotinidase precursor (EC 3.5.1.12)| Length = 524 Score = 27.3 bits (59), Expect = 9.6 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = -3 Query: 148 VFLFPGDDLKAVNYTSSSLCPNWGF-DGERMVIWNCC 41 + +FP D + N+T +S+ P F ++V WN C Sbjct: 88 IIVFPEDGIHGFNFTRTSIYPFLDFMPSPKLVRWNPC 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,709,411 Number of Sequences: 219361 Number of extensions: 864878 Number of successful extensions: 1990 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1970 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1990 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)