>gb|AC164663.5| Mus musculus 10 BAC RP23-44F24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 192449

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 84    aattttcttttacagcatgataata 108
             |||||||||||||| ||||||||||
Sbjct: 38436 aattttcttttacatcatgataata 38412

>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
             complete sequence
          Length = 138969

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 68    ctttccaaaatacaacaattt 88
             |||||||||||||||||||||
Sbjct: 79151 ctttccaaaatacaacaattt 79171

>gb|AC158802.3| Mus musculus 10 BAC RP24-328C19 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 140389

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 84     aattttcttttacagcatgataata 108
              |||||||||||||| ||||||||||
Sbjct: 122856 aattttcttttacatcatgataata 122832

>gb|AC079684.16| Homo sapiens 12 BAC RP11-351C21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 96000

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    atttttctttccaaaatacaa 82
             |||||||||||||||||||||
Sbjct: 23557 atttttctttccaaaatacaa 23537

>gb|AC007976.4| Drosophila melanogaster, chromosome 2L, region 22C-22D, BAC clone
              BACR01K07, complete sequence
          Length = 175867

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 219    gatccaaacctttggtggaat 239
              |||||||||||||||||||||
Sbjct: 166717 gatccaaacctttggtggaat 166697

>gb|AC026772.6| Homo sapiens chromosome 5 clone CTB-83D9, complete sequence
          Length = 132114

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    aacaattttcttttacagcat 101
             |||||||||||||||||||||
Sbjct: 89727 aacaattttcttttacagcat 89707

>gb|AC092186.1|AC092186 Drosophila melanogaster, chromosome 2L, region 22D-22E, BAC clone
             BACR22P10, complete sequence
          Length = 184650

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   gatccaaacctttggtggaat 239
             |||||||||||||||||||||
Sbjct: 11065 gatccaaacctttggtggaat 11045

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 68       ctttccaaaatacaacaattt 88
                |||||||||||||||||||||
Sbjct: 22870376 ctttccaaaatacaacaattt 22870396

>gb|AC093784.3| Homo sapiens BAC clone RP11-211K17 from 2, complete sequence
          Length = 165500

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 62     atttttctttccaaaatacaa 82
              |||||||||||||||||||||
Sbjct: 105370 atttttctttccaaaatacaa 105390

>gb|AE003583.3| Drosophila melanogaster chromosome 2L, section 8 of 83 of the complete
             sequence
          Length = 303641

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   gatccaaacctttggtggaat 239
             |||||||||||||||||||||
Sbjct: 21274 gatccaaacctttggtggaat 21254

>gb|AC004340.1|AC004340 Drosophila melanogaster DNA sequence (P1 DS07020 (D238)), complete
             sequence
          Length = 51050

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 219   gatccaaacctttggtggaat 239
             |||||||||||||||||||||
Sbjct: 46749 gatccaaacctttggtggaat 46729

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 54      gatacaacatttttctttccaaaa 77
               |||||||| |||||||||||||||
Sbjct: 2511515 gatacaacttttttctttccaaaa 2511538

>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     atcaatttgaattggaagtg 27
             ||||||||||||||||||||
Sbjct: 95271 atcaatttgaattggaagtg 95290

>gb|AC107677.7| Mus musculus chromosome 3, clone RP23-235F22, complete sequence
          Length = 157746

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     tgatacaacatttttctttc 72
              ||||||||||||||||||||
Sbjct: 138988 tgatacaacatttttctttc 138969

>gb|AC165313.7| Mus musculus chromosome 5, clone RP24-294J23, complete sequence
          Length = 137597

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aacaattttcttttacagca 100
             ||||||||||||||||||||
Sbjct: 69141 aacaattttcttttacagca 69160

>gb|AC162459.2| Mus musculus chromosome 3, clone RP23-80A8, complete sequence
          Length = 207515

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    tgatacaacatttttctttc 72
             ||||||||||||||||||||
Sbjct: 46727 tgatacaacatttttctttc 46708

>gb|AC165335.3| Mus musculus BAC clone RP24-481H19 from chromosome 5, complete sequence
          Length = 212783

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    aacaattttcttttacagca 100
             ||||||||||||||||||||
Sbjct: 92023 aacaattttcttttacagca 92004

>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence
          Length = 173131

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     tttttctttccaaaatacaa 82
              ||||||||||||||||||||
Sbjct: 140169 tttttctttccaaaatacaa 140150

>gb|AC121947.2| Mus musculus BAC clone RP24-213L3 from 13, complete sequence
          Length = 154202

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    ttctttccaaaatacaacaa 85
             ||||||||||||||||||||
Sbjct: 40105 ttctttccaaaatacaacaa 40124

>emb|AL096868.15|HSJ493D19 Human DNA sequence from clone RP3-493D19 on chromosome 6q14.3-16.1
             Contains part of the RNGTT gene for RNA
             guanylyltransferase and 5'-phosphatase (mRNA capping
             enzyme, CAP1A), complete sequence
          Length = 151761

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    attttcttttacagcatgat 104
             ||||||||||||||||||||
Sbjct: 26087 attttcttttacagcatgat 26106

>emb|AL031430.2|HS406M12 Human DNA sequence from clone RP3-406M12 on chromosome 1p34.1-34.3
             Contains a CpG island, complete sequence
          Length = 159281

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    aacatttttctttccaaaat 78
             ||||||||||||||||||||
Sbjct: 26753 aacatttttctttccaaaat 26772

>gb|AC160551.4| Mus musculus chromosome 5, clone RP23-296C20, complete sequence
          Length = 173331

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aacaattttcttttacagca 100
             ||||||||||||||||||||
Sbjct: 23104 aacaattttcttttacagca 23123

>emb|CR382323.8| Zebrafish DNA sequence from clone DKEY-226M8 in linkage group 5,
             complete sequence
          Length = 143411

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    ttcttttacagcatgataat 107
             ||||||||||||||||||||
Sbjct: 83033 ttcttttacagcatgataat 83014

>gb|AC142396.25| Medicago truncatula clone mth2-6g9, complete sequence
          Length = 106058

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tttttctttccaaaatacaa 82
             ||||||||||||||||||||
Sbjct: 29257 tttttctttccaaaatacaa 29276

>gb|AC113139.2| Homo sapiens chromosome 8, clone CTD-3214K23, complete sequence
          Length = 185102

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    atacaacatttttctttcca 74
             ||||||||||||||||||||
Sbjct: 37900 atacaacatttttctttcca 37881

>emb|CR523411.1| Gallus gallus finished cDNA, clone ChEST193j24
          Length = 1928

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 64  ttttctttccaaaatacaacaatt 87
           |||||||||||||||| |||||||
Sbjct: 174 ttttctttccaaaatataacaatt 151

>emb|BX511138.10| Zebrafish DNA sequence from clone DKEYP-52D3 in linkage group 5, complete
              sequence
          Length = 190187

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     aaaatacaacaattttcttttaca 97
              ||||| ||||||||||||||||||
Sbjct: 119893 aaaattcaacaattttcttttaca 119916

>emb|CR353617.1| Gallus gallus finished cDNA, clone ChEST117f19
          Length = 665

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  actgatacaacatttttctt 70
           ||||||||||||||||||||
Sbjct: 237 actgatacaacatttttctt 256

>gb|AC099799.6| Homo sapiens BAC clone RP11-637F15 from 2, complete sequence
          Length = 85432

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 158   aattagcttttgactatgcacatt 181
             ||||||||||| ||||||||||||
Sbjct: 41114 aattagcttttaactatgcacatt 41137

>gb|AC116176.4| Homo sapiens BAC clone RP11-299D11 from 2, complete sequence
          Length = 96974

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 158   aattagcttttgactatgcacatt 181
             ||||||||||| ||||||||||||
Sbjct: 80595 aattagcttttaactatgcacatt 80618

>gb|AC131153.2| Homo sapiens 3 BAC RP11-264F21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 126619

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     tttttctttccaaaatacaa 82
              ||||||||||||||||||||
Sbjct: 109191 tttttctttccaaaatacaa 109210

>gb|AC154578.2| Mus musculus BAC clone RP23-375N17 from 16, complete sequence
          Length = 203029

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 51     actgatacaacatttttctttcca 74
              ||||||||||| ||||||||||||
Sbjct: 146811 actgatacaacctttttctttcca 146788

>gb|AC155928.2| Mus musculus BAC clone RP24-70N20 from 9, complete sequence
          Length = 239304

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    taatatgagtgcttgaaacc 123
              ||||||||||||||||||||
Sbjct: 100670 taatatgagtgcttgaaacc 100651

>gb|U37081.1|HIU37081 Hexamita inflata elongation factor 1 alpha gene, partial cds
          Length = 1198

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 111 agtgcttgaaaccgatttgc 130
           ||||||||||||||||||||
Sbjct: 506 agtgcttgaaaccgatttgc 487

>emb|CT010569.11| Mouse DNA sequence from clone RP23-237G24 on chromosome 16, complete
             sequence
          Length = 238459

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 51    actgatacaacatttttctttcca 74
             ||||||||||| ||||||||||||
Sbjct: 91343 actgatacaacctttttctttcca 91366

>gb|AC147561.3| Mus musculus BAC clone RP23-314D3 from 13, complete sequence
          Length = 183494

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ttctttccaaaatacaacaa 85
             ||||||||||||||||||||
Sbjct: 24058 ttctttccaaaatacaacaa 24039

>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete
             sequence
          Length = 192322

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tttttctttccaaaatacaa 82
             ||||||||||||||||||||
Sbjct: 19911 tttttctttccaaaatacaa 19930

>emb|AL732441.10| Mouse DNA sequence from clone RP23-142N2 on chromosome 2, complete
              sequence
          Length = 194006

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      gaaaaccatcaatttgaatt 20
              ||||||||||||||||||||
Sbjct: 122779 gaaaaccatcaatttgaatt 122760


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,311,687
Number of Sequences: 3902068
Number of extensions: 3311687
Number of successful extensions: 70113
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70011
Number of HSP's gapped (non-prelim): 102
length of query: 317
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 295
effective length of database: 17,147,199,772
effective search space: 5058423932740
effective search space used: 5058423932740
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)