Clone Name | rbastl20h05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, complete sequence Length = 215975 Score = 40.1 bits (20), Expect = 0.95 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 acatccaagatcacagcaaa 77 |||||||||||||||||||| Sbjct: 76599 acatccaagatcacagcaaa 76580
>emb|AJ338005.1|HSA338005 Homo sapiens genomic sequence surrounding NotI site, clone NR1-IF13C Length = 709 Score = 40.1 bits (20), Expect = 0.95 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 caagatcacagcaaaagaac 82 |||||||||||||||||||| Sbjct: 494 caagatcacagcaaaagaac 513
>gb|AC140389.3| Mus musculus BAC clone RP24-202H2 from chromosome 18, complete sequence Length = 169195 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 agtttaactacatccaaga 67 ||||||||||||||||||| Sbjct: 96938 agtttaactacatccaaga 96956
>emb|AL512443.7| Human DNA sequence from clone RP11-108P2 on chromosome 1 Contains part of a novel gene and the ZNF265 gene for zinc finger protein 265, complete sequence Length = 55613 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 65 agatcacagcaaaagaaca 83 ||||||||||||||||||| Sbjct: 35233 agatcacagcaaaagaaca 35215
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete sequence Length = 264534 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 acagcaaaagaacattcat 88 ||||||||||||||||||| Sbjct: 144017 acagcaaaagaacattcat 144035
>dbj|AK149037.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120478D08 product:unclassifiable, full insert sequence Length = 1458 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 aagatcacagcaaaagaac 82 ||||||||||||||||||| Sbjct: 610 aagatcacagcaaaagaac 628
>gb|AC069476.25| Homo sapiens chromosome 11 clone b430h11 map 11, complete sequence Length = 184824 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 ttctacatccaggccaatc 40 ||||||||||||||||||| Sbjct: 78564 ttctacatccaggccaatc 78582
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 3.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 atagtttaactacatccaagatc 69 ||||||||||||| ||||||||| Sbjct: 14667142 atagtttaactacttccaagatc 14667164
>dbj|AP004855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1538_H05 Length = 132282 Score = 38.2 bits (19), Expect = 3.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 47 atagtttaactacatccaagatc 69 ||||||||||||| ||||||||| Sbjct: 57940 atagtttaactacttccaagatc 57962
>dbj|AP003174.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-136I14, complete sequence Length = 170156 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 ttctacatccaggccaatc 40 ||||||||||||||||||| Sbjct: 133329 ttctacatccaggccaatc 133347
>emb|AL732491.11| Mouse DNA sequence from clone RP23-28I4 on chromosome 11, complete sequence Length = 60927 Score = 38.2 bits (19), Expect = 3.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 64 aagatcacagcaaaagaac 82 ||||||||||||||||||| Sbjct: 3036 aagatcacagcaaaagaac 3054 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 702,192 Number of Sequences: 3902068 Number of extensions: 702192 Number of successful extensions: 80188 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80159 Number of HSP's gapped (non-prelim): 29 length of query: 88 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 67 effective length of database: 17,151,101,840 effective search space: 1149123823280 effective search space used: 1149123823280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)