Clone Name | rbastl20h04 |
---|---|
Clone Library Name | barley_pub |
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 32.0 bits (71), Expect = 0.40 Identities = 20/58 (34%), Positives = 29/58 (50%) Frame = +1 Query: 142 TKTSHLTEEEKKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHSCNLAKIYSSKL 315 + TS T ++ + GSS S AA+ PK++A + P N+ SC A SS L Sbjct: 250 SSTSSSTSSTQETAATTSEGSSSSSAAITSSPKAIA--YSPYNDDGSCKSADAVSSDL 305
>LUZP1_HUMAN (Q86V48) Leucine zipper protein 1| Length = 1076 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%) Frame = +1 Query: 145 KTSHL-------TEEEKKKKPCSFPGSSKS*AAVAERPKSMASSFPPNNNQHS 282 K SH+ T+E KK + PGSS+S + S+ S +PP +HS Sbjct: 433 KASHMGVSTDSGTQETKKTEDRFVPGSSQSEGKKSREQPSVLSRYPPAAQEHS 485
>COX1_MYTED (P41774) Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c| oxidase polypeptide I) Length = 551 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Frame = -3 Query: 226 RRRPNSYWSLGMNKAFFF-----FLLLSNGMFLCLLQCYYFFSVLTQFVTMYCGFGVFCR 62 + +P +YWS G F LL S M + L YY + ++M FGVFC Sbjct: 351 KMKPAAYWSTGFLFLFTVGGLTGVLLSSASMDVSLHDTYYVVAHFHYVLSMGAVFGVFCG 410 Query: 61 LQY 53 L + Sbjct: 411 LNH 413
>CCNB3_MOUSE (Q810T2) G2/mitotic-specific cyclin-B3| Length = 1396 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -1 Query: 111 FLHNL*QCTVVLEYSVGYNISCQHCRSRKLN 19 ++ NL C LEY GY ++ H RKLN Sbjct: 1319 YMRNLSNCVPTLEYFTGYKMAELHILVRKLN 1349
>YJEH_ECOLI (P39277) Inner membrane protein yjeH| Length = 418 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = -2 Query: 203 EPGNEQGFFFFSSSVKWDVFVSPPMLLFLFSSYTICNNVLWFWSILSVTIYRVSIV 36 E G QG S+S+ + P L L + NN LW W +L + ++ ++IV Sbjct: 7 ELGLAQGIGLLSTSLLGTGVFAVPALAALVAG----NNSLWAWPVLIILVFPIAIV 58
>GZF3_YEAST (P42944) Protein GZF3| Length = 551 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +1 Query: 100 IV*ELKRNNNI-GGDTKTSHLTEEEKKKKPCSFPGSSKS*AAVAERPKS 243 ++ ELK + NI K + +T E+KKKK + S A ++++PK+ Sbjct: 198 LIAELKGDCNIESSGRKANRVTSEDKKKKSSQLLMGTSSTAKISKKPKT 246
>TILS_BUCBP (Q89AX3) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 438 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +2 Query: 5 QNNLKFSFRLLQC*HDIL*PTEYSKTTVHCYKLCKN 112 +NNL F+FR + H + +E K + HC K+C N Sbjct: 36 KNNLNFTFRAIHINHQLHPDSE--KWSDHCKKICIN 69
>YKG6_CAEEL (P46556) Hypothetical protein B0285.6 in chromosome III| Length = 577 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -2 Query: 200 PGNEQGFFFFSSSVKWDVFVSPPMLLFLFSSYTI 99 P + G + S W F PPM+ ++FSS+ I Sbjct: 246 PNEDHGISYLS----WMAFAIPPMIFYMFSSWFI 275
>DOF1A_ARATH (Q9SEZ3) Dof zinc finger protein DOF1.10 (AtDOF1.10) (H-protein| promoter-binding factor 2b) Length = 399 Score = 27.7 bits (60), Expect = 7.6 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Frame = +3 Query: 30 DSYNADTIYCNRQNTPKPQYIVTNCVRTEKK**HWR---RHKNIPFDRRRKKKK 182 +S N Y N N +P+Y NC R +W +N+P R+K K Sbjct: 138 ESANTKFCYYNNYNVNQPRYFCRNCQR------YWTAGGSMRNVPVGSGRRKNK 185
>NAD2_CAEEL (P32739) Sodium-dependent high-affinity dicarboxylate transporter 2| (Na(+)/dicarboxylate cotransporter 2) (NaDC-2) (ceNaDC2) Length = 551 Score = 27.7 bits (60), Expect = 7.6 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = -2 Query: 161 VKWDVFVSPPMLLFLFSSYTI 99 ++W VF PPM ++L +SY I Sbjct: 241 LQWMVFAIPPMFVYLLASYII 261
>EVX2_MOUSE (P49749) Homeobox even-skipped homolog protein 2 (EVX-2)| Length = 475 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -2 Query: 260 GKEEAMDFGLSATAA*LLLEPGNEQGFFFFSSSVKWDVFVSPP 132 G DFG SA A P +E GF +S++V VSPP Sbjct: 429 GTAGGSDFGCSAAA------PRSESGFLPYSAAVLSKTAVSPP 465
>PHR_BUCAI (P57386) Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA| photolyase) (Photoreactivating enzyme) Length = 483 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = -1 Query: 276 LIIVWRKGRSHGFWSLGDGGLTL-TGAWE 193 L+I WR+G H +L DG L L G W+ Sbjct: 359 LLINWREGEEHFISNLIDGDLALNNGGWQ 387 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,075,109 Number of Sequences: 219361 Number of extensions: 911442 Number of successful extensions: 2705 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2654 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2705 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)