Clone Name | rbastl20h03 |
---|---|
Clone Library Name | barley_pub |
>DJLA_MANSM (Q65RA1) DnaJ-like protein djlA| Length = 288 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/50 (38%), Positives = 25/50 (50%) Frame = -3 Query: 158 QTANLQLNTVPRTTIKVEEEEEDLQNNLRSQVWSDGAARHCARLALQGGK 9 QT L + + +V EE+ L NNL SQ+ D A R A+ A GK Sbjct: 59 QTTFAVLGHLSKAKGRVTEEDIQLANNLMSQMQLDVANRQLAQNAFNRGK 108
>AT1A2_CHICK (P24797) Sodium/potassium-transporting ATPase alpha-2 chain (EC| 3.6.3.9) (Sodium pump 2) (Na+/K+ ATPase 2) Length = 1017 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Frame = -3 Query: 161 PQTANLQLNTVPRTTIKVEEEEEDLQNNLRSQVWS-DGAARHCARLALQGGKVP 3 P+ + N+ + + + E EED Q ++ + + C+R+ LQG +VP Sbjct: 470 PKVTEIPFNSTNKYQLSIHEREEDPQGHILVMKGAPERILERCSRILLQGQEVP 523
>ETF1_YMTV (Q9QB97) Early transcription factor 70 kDa subunit (EC 3.6.1.-)| (ATP-dependent helicase VETFS) (VETF small subunit) Length = 635 Score = 28.5 bits (62), Expect = 4.5 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = -3 Query: 227 GG*IIPFVYTS*CTSQFN--MALEPQTANLQLNTVPRTTIKVEEEEEDLQNNLRSQVWSD 54 GG II ++ S S++N P+ N + T T K++ EDL N SQ+ D Sbjct: 351 GGLIIKYIMLSNGYSEYNGSQGTNPKLINGKPKTFAIVTSKMKSSLEDLLNVYNSQLNKD 410 Query: 53 GA 48 G+ Sbjct: 411 GS 412
>EDEM2_HUMAN (Q9BV94) ER degradation-enhancing alpha-mannosidase-like 2| precursor Length = 578 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 183 TVQHGAGAPNGKPPTKYRPKNHHQSGRRRRRPTE 82 TV G P +P T + P+NH Q+ R R+P + Sbjct: 519 TVSSGPWEPPARPGTLFSPENHDQA--RERKPAK 550
>WNK3_HUMAN (Q9BYP7) Serine/threonine-protein kinase WNK3 (EC 2.7.11.1)| (Protein kinase with no lysine 3) (Protein kinase, lysine-deficient 3) Length = 1743 Score = 27.7 bits (60), Expect = 7.7 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = -3 Query: 191 CTSQFNMALEPQTANLQLNTVPRTTIKVEEEEEDLQNNLRSQVWSDGAARHCA 33 C S N+ +PQ L L +T + EE E D ++R Q+ +HC+ Sbjct: 511 CKSMGNVFPQPQNTTLPLAPAQQTGAECEETEVD--QHVRQQLLQRKPQQHCS 561
>TRI38_HUMAN (O00635) Tripartite motif protein 38 (RING finger protein 15) (Zinc| finger protein RoRet) Length = 465 Score = 27.3 bits (59), Expect = 10.0 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = -1 Query: 301 LITSSYLTRWTSKMHIDIYALAAAVGDESYLLCTLHDAHHSSTWRWSPKRQ 149 L T+ +T+W K+ I + + D L C LH+ S WR + Q Sbjct: 159 LSTAMRITKWKEKVQIQRQKIRS---DFKNLQCFLHEEEKSYLWRLEKEEQ 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,394,883 Number of Sequences: 219361 Number of extensions: 930799 Number of successful extensions: 2728 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2685 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2725 length of database: 80,573,946 effective HSP length: 78 effective length of database: 63,463,788 effective search space used: 1523130912 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)