ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl20g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor is... 260 1e-66
2gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor i... 258 4e-66
3emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 100 2e-18
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 2e-18
5dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 2e-18
6dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 2e-18
7emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 100 2e-18
8emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5... 44 0.11
9emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 ... 42 0.44
10gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom... 40 1.7
11gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, com... 40 1.7
12gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, c... 40 1.7
13gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's ... 40 1.7
14emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on ch... 40 1.7
15emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chr... 40 1.7
16gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's... 40 1.7
17emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo... 40 1.7
18emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in... 40 1.7
19emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in... 40 1.7
20emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 ... 40 1.7
21gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, comp... 40 1.7
22gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, c... 40 1.7
23dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome 40 1.7
24emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chro... 40 1.7
25emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, ... 40 1.7
26emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in ... 40 1.7
27emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in ... 40 1.7
28emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 i... 40 1.7
29emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in ... 40 1.7
30emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-9... 40 1.7
31emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in... 40 1.7
32gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl... 40 1.7
33gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosom... 38 6.9
34gb|AC163008.9| Mus musculus chromosome 15, clone RP23-105P11, co... 38 6.9
35gb|AY267749.1| Mytilus edulis histone H3 (H3) gene, complete cds 38 6.9
36gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, co... 38 6.9
37emb|CR391904.14| Zebrafish DNA sequence from clone DKEY-165J6 in... 38 6.9
38gb|AC121841.3| Mus musculus BAC clone RP24-80D5 from chromosome ... 38 6.9
39gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complet... 38 6.9
40gb|AC099651.4| Homo sapiens BAC clone RP11-685B22 from 7, comple... 38 6.9
41gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, com... 38 6.9
42gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete s... 38 6.9
43emb|AL513170.16| Human DNA sequence from clone RP11-285B4 on chr... 38 6.9
44emb|AL356270.11| Human DNA sequence from clone RP5-873O15 on chr... 38 6.9
45gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map... 38 6.9
46emb|AL137781.18| Human DNA sequence from clone RP11-263K14 on ch... 38 6.9
47gb|AC159971.4| Mus musculus chromosome 5, clone RP23-263G19, com... 38 6.9
48emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 i... 38 6.9
49gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, com... 38 6.9
50emb|CR388098.7| Zebrafish DNA sequence from clone DKEY-12J14 in ... 38 6.9
51emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 ... 38 6.9
52gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete s... 38 6.9
53gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 ma... 38 6.9
54gb|AC099493.2| Homo sapiens chromosome 5 clone RP11-10I19, compl... 38 6.9
55gb|AC022073.13| Homo sapiens chr12 BAC RP11-674J14 (Roswell Park... 38 6.9
56dbj|AK145606.1| Mus musculus blastocyst blastocyst cDNA, RIKEN f... 38 6.9
57gb|AC016884.10| Homo sapiens chromosome , clone RP11-350M7, comp... 38 6.9
58emb|BX470158.9| Zebrafish DNA sequence from clone CH211-113P5 in... 38 6.9
59emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in... 38 6.9
60emb|CR392361.2| Zebrafish DNA sequence from clone DKEY-73H23 in ... 38 6.9
61gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 38 6.9
62emb|BX842561.12| Mouse DNA sequence from clone RP23-440P8 on chr... 38 6.9
63emb|BX324205.5| Zebrafish DNA sequence from clone CH211-10K1 in ... 38 6.9
64gb|AC153548.4| Mus musculus 10 BAC RP23-356G7 (Roswell Park Canc... 38 6.9
65gb|AC093522.4| Homo sapiens chromosome 16 clone RP11-172I18, com... 38 6.9
66gb|AC108733.4| Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cance... 38 6.9
67gb|AC062020.5| Homo sapiens BAC clone RP11-154O23 from 2, comple... 38 6.9
68emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, c... 38 6.9
69emb|AL807827.11| Zebrafish DNA sequence from clone CH211-220J6, ... 38 6.9
70emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, co... 38 6.9
71emb|BX005204.7| Zebrafish DNA sequence from clone CH211-151G17, ... 38 6.9
72emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in... 38 6.9
73gb|AC123994.11| Mus musculus chromosome 5, clone RP24-360P14, co... 38 6.9
74emb|AL929115.9| Zebrafish DNA sequence from clone CH211-146M13 i... 38 6.9
75emb|BX005134.5| Zebrafish DNA sequence from clone CH211-162G1 in... 38 6.9
76emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15,... 38 6.9
77gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malay... 38 6.9
78emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in ... 38 6.9
79emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 ... 38 6.9
80emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, co... 38 6.9
81gb|AC093316.28| Mus musculus strain C57BL/6J chromosome 10 clone... 38 6.9
82emb|AL671872.10| Mouse DNA sequence from clone RP23-151N17 on ch... 38 6.9 
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
            sequence
          Length = 2863

 Score =  260 bits (131), Expect = 1e-66
 Identities = 134/135 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    tttcgactcctacaatgctgacacgatatattgtaaccgacagaatactccaaaaccaca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2838 tttcgactcctacaatgctgacacgatatattgtaaccgacagaatactccaaaaccaca 2779

                                                                        
Query: 61   gtacattgttacaaattgtgtaagaactgaaaagaaataataacattggaggagacacaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2778 gtacattgttacaaattgtgtaagaactgaaaagaaataataacattggaggagacacaa 2719

                           
Query: 121  aaacatcccacttga 135
            |||||||||| ||||
Sbjct: 2718 aaacatcccatttga 2704
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>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA,
            complete cds
          Length = 2887

 Score =  258 bits (130), Expect = 4e-66
 Identities = 130/130 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    tttcgactcctacaatgctgacacgatatattgtaaccgacagaatactccaaaaccaca 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2842 tttcgactcctacaatgctgacacgatatattgtaaccgacagaatactccaaaaccaca 2783

                                                                        
Query: 61   gtacattgttacaaattgtgtaagaactgaaaagaaataataacattggaggagacacaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2782 gtacattgttacaaattgtgtaagaactgaaaagaaataataacattggaggagacacaa 2723

                      
Query: 121  aaacatccca 130
            ||||||||||
Sbjct: 2722 aaacatccca 2713
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 19    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 77
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 42105 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 42164

                                       
Query: 78    gtgtaagaactgaaaagaaataataa 103
             ||||| | || |||||||| ||||||
Sbjct: 42165 gtgtacgcacagaaaagaactaataa 42190
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 19       tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 77
                |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 24921520 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 24921579

                                          
Query: 78       gtgtaagaactgaaaagaaataataa 103
                ||||| | || |||||||| ||||||
Sbjct: 24921580 gtgtacgcacagaaaagaactaataa 24921605
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>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full
            insert sequence
          Length = 2907

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 19   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 77
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 2795 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 2736

                                      
Query: 78   gtgtaagaactgaaaagaaataataa 103
            ||||| | || |||||||| ||||||
Sbjct: 2735 gtgtacgcacagaaaagaactaataa 2710
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>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full
            insert sequence
          Length = 1712

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 19   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 77
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 1701 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 1642

                                      
Query: 78   gtgtaagaactgaaaagaaataataa 103
            ||||| | || |||||||| ||||||
Sbjct: 1641 gtgtacgcacagaaaagaactaataa 1616
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 99.6 bits (50), Expect = 2e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 19    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 77
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 49634 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 49693

                                       
Query: 78    gtgtaagaactgaaaagaaataataa 103
             ||||| | || |||||||| ||||||
Sbjct: 49694 gtgtacgcacagaaaagaactaataa 49719
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>emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5 on chromosome X, complete
            sequence
          Length = 39550

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 82   aagaactgaaaagaaataataacatt 107
            |||| |||||||||||||||||||||
Sbjct: 3229 aagagctgaaaagaaataataacatt 3204
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>emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 in linkage group 21,
              complete sequence
          Length = 164899

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 10     ctacaatgctgacacgatatattgt 34
              |||||||||||| ||||||||||||
Sbjct: 122731 ctacaatgctgaaacgatatattgt 122707
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>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    gaaaagaaataataacattg 108
             ||||||||||||||||||||
Sbjct: 39323 gaaaagaaataataacattg 39342
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>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     aaattgtgtaagaactgaaa 92
              ||||||||||||||||||||
Sbjct: 107485 aaattgtgtaagaactgaaa 107504
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>gb|AC131080.13| Mus musculus chromosome 16, clone RP23-438H16, complete sequence
          Length = 192584

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 69     ttacaaattgtgtaagaactgaaaagaaataa 100
              |||||||| || ||||||||||||| ||||||
Sbjct: 132634 ttacaaatagtttaagaactgaaaataaataa 132665
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>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 170859

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    tgaaaagaaataataacatt 107
             ||||||||||||||||||||
Sbjct: 30825 tgaaaagaaataataacatt 30844
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>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9,
          complete sequence
          Length = 164559

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 76 ttgtgtaagaactgaaaagaaata 99
          |||||||||||||||||| |||||
Sbjct: 55 ttgtgtaagaactgaaaaaaaata 32
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>emb|AL354701.7| Human DNA sequence from clone RP11-785H23 on chromosome 9 Contains the 3'
              end of a novel gene, and a novel pseudogene, complete
              sequence
          Length = 131366

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 76     ttgtgtaagaactgaaaagaaata 99
              |||||||||||||||||| |||||
Sbjct: 129421 ttgtgtaagaactgaaaaaaaata 129398
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>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    tgaaaagaaataataacatt 107
             ||||||||||||||||||||
Sbjct: 41625 tgaaaagaaataataacatt 41606
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>emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo-8-phosphate synthase, exons
           1-4
          Length = 1812

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  taagaactgaaaagaaataa 100
           ||||||||||||||||||||
Sbjct: 639 taagaactgaaaagaaataa 620
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>emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in linkage group 24,
             complete sequence
          Length = 152666

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atgctgacacgatatattgt 34
             ||||||||||||||||||||
Sbjct: 54458 atgctgacacgatatattgt 54439
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>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3,
              complete sequence
          Length = 241961

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     atgctgacacgatatattgt 34
              ||||||||||||||||||||
Sbjct: 198757 atgctgacacgatatattgt 198776
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>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20,
             complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    tgaaaagaaataataacatt 107
             ||||||||||||||||||||
Sbjct: 84744 tgaaaagaaataataacatt 84763
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>gb|AC108104.2| Homo sapiens chromosome 5 clone RP11-198P15, complete sequence
          Length = 96678

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    acaaattgtgtaagaactga 90
             ||||||||||||||||||||
Sbjct: 56401 acaaattgtgtaagaactga 56382
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>gb|AC084664.1|CBRG47C14 Caenorhabditis briggsae cosmid G47C14, complete sequence
          Length = 41476

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   gtgtaagaactgaaaagaaa 97
            ||||||||||||||||||||
Sbjct: 5836 gtgtaagaactgaaaagaaa 5855
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>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 81     taagaactgaaaagaaataataac 104
              |||||||| |||||||||||||||
Sbjct: 183747 taagaacttaaaagaaataataac 183724
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>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete
             sequence
          Length = 159731

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    gaaaagaaataataacattg 108
             ||||||||||||||||||||
Sbjct: 65829 gaaaagaaataataacattg 65810
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>emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, complete sequence
          Length = 145569

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atgctgacacgatatattgt 34
             ||||||||||||||||||||
Sbjct: 50947 atgctgacacgatatattgt 50928
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>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20,
             complete sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atgctgacacgatatattgt 34
             ||||||||||||||||||||
Sbjct: 46843 atgctgacacgatatattgt 46824
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>emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in linkage group 20,
           complete sequence
          Length = 9831

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tgaaaagaaataataacatt 107
           ||||||||||||||||||||
Sbjct: 360 tgaaaagaaataataacatt 379
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>emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 in linkage group 20,
             complete sequence
          Length = 189717

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atgctgacacgatatattgt 34
             ||||||||||||||||||||
Sbjct: 78894 atgctgacacgatatattgt 78875
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>emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in linkage group 20,
             complete sequence
          Length = 209360

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    atgctgacacgatatattgt 34
             ||||||||||||||||||||
Sbjct: 38990 atgctgacacgatatattgt 38971
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>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178433

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   taacattggaggagacacaaaaac 124
             ||||||||||||||||||| ||||
Sbjct: 93093 taacattggaggagacacataaac 93116
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>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1,
              complete sequence
          Length = 184073

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     atgctgacacgatatattgt 34
              ||||||||||||||||||||
Sbjct: 135077 atgctgacacgatatattgt 135096
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>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   gaaaagaaataataacattg 108
            ||||||||||||||||||||
Sbjct: 7379 gaaaagaaataataacattg 7360
to top
>gb|AC164303.2| Mus musculus BAC clone RP24-530J21 from chromosome 14, complete
             sequence
          Length = 164905

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 44    aatactccaaaaccacagt 62
             |||||||||||||||||||
Sbjct: 66373 aatactccaaaaccacagt 66391
to top
>gb|AC163008.9| Mus musculus chromosome 15, clone RP23-105P11, complete sequence
          Length = 211071

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 54   aaccacagtacattgttacaaat 76
            ||||| |||||||||||||||||
Sbjct: 9388 aaccagagtacattgttacaaat 9410
to top
>gb|AY267749.1| Mytilus edulis histone H3 (H3) gene, complete cds
          Length = 907

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 38  cgacagaatactccaaaac 56
           |||||||||||||||||||
Sbjct: 239 cgacagaatactccaaaac 221
to top
>gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, complete sequence
          Length = 236274

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 104    cattggaggagacacaaaa 122
              |||||||||||||||||||
Sbjct: 203786 cattggaggagacacaaaa 203804
to top
>emb|CR391904.14| Zebrafish DNA sequence from clone DKEY-165J6 in linkage group 3,
             complete sequence
          Length = 147391

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 12    acaatgctgacacgatatattgt 34
             |||||||||| ||||||||||||
Sbjct: 52385 acaatgctgaaacgatatattgt 52363
to top
>gb|AC121841.3| Mus musculus BAC clone RP24-80D5 from chromosome 5, complete sequence
          Length = 199487

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 81     taagaactgaaaagaaataataa 103
              ||||||||||| |||||||||||
Sbjct: 120867 taagaactgaatagaaataataa 120889
to top
>gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complete sequence
          Length = 195006

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 89    gaaaagaaataataacatt 107
             |||||||||||||||||||
Sbjct: 70439 gaaaagaaataataacatt 70457
to top
>gb|AC099651.4| Homo sapiens BAC clone RP11-685B22 from 7, complete sequence
          Length = 120985

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 87     ctgaaaagaaataataaca 105
              |||||||||||||||||||
Sbjct: 114189 ctgaaaagaaataataaca 114207
to top
>gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, complete sequence
          Length = 164681

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 54    aaccacagtacattgttacaaat 76
             ||||| |||||||||||||||||
Sbjct: 12053 aaccagagtacattgttacaaat 12031
to top
>gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete sequence
          Length = 144306

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 78     gtgtaagaactgaaaagaaataa 100
              ||||||||||||||||| |||||
Sbjct: 136035 gtgtaagaactgaaaaggaataa 136013
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>emb|AL513170.16| Human DNA sequence from clone RP11-285B4 on chromosome 1, complete
             sequence
          Length = 96748

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 95    aaataataacattggagga 113
             |||||||||||||||||||
Sbjct: 18032 aaataataacattggagga 18014
to top
>emb|AL356270.11| Human DNA sequence from clone RP5-873O15 on chromosome 1 Contains part
             of a novel gene and the CLCA3 gene for chloride channel
             calcium activated family member 3, complete sequence
          Length = 103640

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    aaaagaaataataacattg 108
             |||||||||||||||||||
Sbjct: 20257 aaaagaaataataacattg 20275
to top
>gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map 10, complete sequence
          Length = 228883

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 71    acaaattgtgtaagaactgaaaa 93
             ||||||| |||||||||||||||
Sbjct: 17213 acaaattatgtaagaactgaaaa 17235
to top
>emb|AL137781.18| Human DNA sequence from clone RP11-263K14 on chromosome 13q22.3-31.3,
             complete sequence
          Length = 147978

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    aaaagaaataataacattg 108
             |||||||||||||||||||
Sbjct: 77699 aaaagaaataataacattg 77681
to top
>gb|AC159971.4| Mus musculus chromosome 5, clone RP23-263G19, complete sequence
          Length = 163375

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 81    taagaactgaaaagaaataataa 103
             ||||||||||| |||||||||||
Sbjct: 26860 taagaactgaatagaaataataa 26882
to top
>emb|BX465864.12| Zebrafish DNA sequence from clone DKEY-148F24 in linkage group 23,
              complete sequence
          Length = 128483

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     aactgaaaagaaataataa 103
              |||||||||||||||||||
Sbjct: 103740 aactgaaaagaaataataa 103758
to top
>gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, complete sequence
          Length = 211621

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 114    gacacaaaaacatcccact 132
              |||||||||||||||||||
Sbjct: 115218 gacacaaaaacatcccact 115200
to top
>emb|CR388098.7| Zebrafish DNA sequence from clone DKEY-12J14 in linkage group 13,
             complete sequence
          Length = 192818

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 12    acaatgctgacacgatatattgt 34
             |||||||||| ||||||||||||
Sbjct: 18492 acaatgctgaaacgatatattgt 18514
to top
>emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 in linkage group 3,
             complete sequence
          Length = 187734

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 12    acaatgctgacacgatatattgt 34
             |||||||||| ||||||||||||
Sbjct: 49113 acaatgctgaaacgatatattgt 49135
to top
>gb|AC161034.23| Medicago truncatula clone mth2-53o24, complete sequence
          Length = 128806

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 78     gtgtaagaactgaaaagaaataa 100
              ||||||||||||||||| |||||
Sbjct: 128594 gtgtaagaactgaaaaggaataa 128616
to top
>gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 map CIC06E08, complete
             sequence
          Length = 99359

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 82    aagaactgaaaagaaataataac 104
             ||||||||||||||||| |||||
Sbjct: 66569 aagaactgaaaagaaattataac 66547
to top
>gb|AC099493.2| Homo sapiens chromosome 5 clone RP11-10I19, complete sequence
          Length = 162705

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    aagaactgaaaagaaataa 100
             |||||||||||||||||||
Sbjct: 87985 aagaactgaaaagaaataa 87967
to top
>gb|AC022073.13| Homo sapiens chr12 BAC RP11-674J14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 182247

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    aagaactgaaaagaaataa 100
             |||||||||||||||||||
Sbjct: 98773 aagaactgaaaagaaataa 98755
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>dbj|AK145606.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched
           library, clone:I1C0021B19 product:unclassifiable, full
           insert sequence
          Length = 1427

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 104 cattggaggagacacaaaa 122
           |||||||||||||||||||
Sbjct: 883 cattggaggagacacaaaa 901
to top
>gb|AC016884.10| Homo sapiens chromosome , clone RP11-350M7, complete sequence
          Length = 209320

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 91    aaagaaataataacattgg 109
             |||||||||||||||||||
Sbjct: 70311 aaagaaataataacattgg 70329
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>emb|BX470158.9| Zebrafish DNA sequence from clone CH211-113P5 in linkage group 8,
             complete sequence
          Length = 119483

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 13    caatgctgacacgatatattgta 35
             ||||||||| |||||||||||||
Sbjct: 75771 caatgctgaaacgatatattgta 75793
to top
>emb|BX664745.13| Zebrafish DNA sequence from clone DKEY-242A8 in linkage group 23,
              complete sequence
          Length = 261934

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 13     caatgctgacacgatatattgta 35
              ||||||||| |||||||||||||
Sbjct: 184614 caatgctgaaacgatatattgta 184636
to top
>emb|CR392361.2| Zebrafish DNA sequence from clone DKEY-73H23 in linkage group 9, complete
              sequence
          Length = 163815

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     aaattgtgtaagaactgaa 91
              |||||||||||||||||||
Sbjct: 101202 aaattgtgtaagaactgaa 101220
to top
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 85      aactgaaaagaaataataa 103
               |||||||||||||||||||
Sbjct: 1640360 aactgaaaagaaataataa 1640342
to top
>emb|BX842561.12| Mouse DNA sequence from clone RP23-440P8 on chromosome 4, complete
            sequence
          Length = 112732

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 89   gaaaagaaataataacatt 107
            |||||||||||||||||||
Sbjct: 2797 gaaaagaaataataacatt 2815
to top
>emb|BX324205.5| Zebrafish DNA sequence from clone CH211-10K1 in linkage group 14,
              complete sequence
          Length = 168546

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 13     caatgctgacacgatatattgta 35
              ||||||||| |||||||||||||
Sbjct: 162697 caatgctgaaacgatatattgta 162675
to top
>gb|AC153548.4| Mus musculus 10 BAC RP23-356G7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 194511

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 71     acaaattgtgtaagaactgaaaa 93
              ||||||| |||||||||||||||
Sbjct: 126587 acaaattatgtaagaactgaaaa 126565
to top
>gb|AC093522.4| Homo sapiens chromosome 16 clone RP11-172I18, complete sequence
          Length = 162017

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 83    agaactgaaaagaaataat 101
             |||||||||||||||||||
Sbjct: 94991 agaactgaaaagaaataat 95009
to top
>gb|AC108733.4| Homo sapiens 3 BAC RP11-789F5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 171184

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 85     aactgaaaagaaataataa 103
              |||||||||||||||||||
Sbjct: 137240 aactgaaaagaaataataa 137222
to top
>gb|AC062020.5| Homo sapiens BAC clone RP11-154O23 from 2, complete sequence
          Length = 170197

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    aagaactgaaaagaaataa 100
             |||||||||||||||||||
Sbjct: 22450 aagaactgaaaagaaataa 22468
to top
>emb|BX571811.5| Zebrafish DNA sequence from clone CH211-194P6, complete sequence
          Length = 219044

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 12    acaatgctgacacgatatattgt 34
             |||||||||| ||||||||||||
Sbjct: 17493 acaatgctgaaacgatatattgt 17471
to top
>emb|AL807827.11| Zebrafish DNA sequence from clone CH211-220J6, complete sequence
          Length = 199141

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 90     aaaagaaataataacattg 108
              |||||||||||||||||||
Sbjct: 132146 aaaagaaataataacattg 132128
to top
>emb|AL845168.5| Zebrafish DNA sequence from clone DKEY-91M11, complete sequence
          Length = 198627

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 13     caatgctgacacgatatattgta 35
              ||||||||| |||||||||||||
Sbjct: 112377 caatgctgaaacgatatattgta 112399
to top
>emb|BX005204.7| Zebrafish DNA sequence from clone CH211-151G17, complete sequence
          Length = 146297

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 12    acaatgctgacacgatatattgt 34
             |||||||||| ||||||||||||
Sbjct: 89764 acaatgctgaaacgatatattgt 89742
to top
>emb|BX284688.13| Zebrafish DNA sequence from clone DKEY-71K16 in linkage group 25,
              complete sequence
          Length = 236784

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 12     acaatgctgacacgatatattgt 34
              |||||||||| ||||||||||||
Sbjct: 183305 acaatgctgaaacgatatattgt 183327
to top
>gb|AC123994.11| Mus musculus chromosome 5, clone RP24-360P14, complete sequence
          Length = 148929

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 114   gacacaaaaacatcccact 132
             |||||||||||||||||||
Sbjct: 46823 gacacaaaaacatcccact 46805
to top
>emb|AL929115.9| Zebrafish DNA sequence from clone CH211-146M13 in linkage group 7,
             complete sequence
          Length = 148315

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 13    caatgctgacacgatatattgta 35
             ||||||||| |||||||||||||
Sbjct: 96191 caatgctgaaacgatatattgta 96213
to top
>emb|BX005134.5| Zebrafish DNA sequence from clone CH211-162G1 in linkage group 12,
             complete sequence
          Length = 132434

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    aaattgtgtaagaactgaa 91
             |||||||||||||||||||
Sbjct: 66078 aaattgtgtaagaactgaa 66060
to top
>emb|AL935205.13| Zebrafish DNA sequence from clone CH211-233F15, complete sequence
          Length = 150641

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 85     aactgaaaagaaataataa 103
              |||||||||||||||||||
Sbjct: 106236 aactgaaaagaaataataa 106254
to top
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome
          Length = 1080084

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 55     accacagtacattgttacaaatt 77
              ||||||||||| |||||||||||
Sbjct: 134179 accacagtacagtgttacaaatt 134201
to top
>emb|BX088545.7| Zebrafish DNA sequence from clone DKEY-60G19 in linkage group 17,
             complete sequence
          Length = 156881

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 13    caatgctgacacgatatattgta 35
             ||||||||| |||||||||||||
Sbjct: 58368 caatgctgaaacgatatattgta 58390
to top
>emb|CR384057.25| Zebrafish DNA sequence from clone CH211-243K10 in linkage group 17,
             complete sequence
          Length = 154493

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 13    caatgctgacacgatatattgta 35
             ||||||||| |||||||||||||
Sbjct: 52987 caatgctgaaacgatatattgta 52965
to top
>emb|AL844522.7| Zebrafish DNA sequence from clone DKEY-113M9, complete sequence
          Length = 193193

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 12    acaatgctgacacgatatattgt 34
             |||||||||| ||||||||||||
Sbjct: 16095 acaatgctgaaacgatatattgt 16073
to top
>gb|AC093316.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202i7, complete
             sequence
          Length = 226567

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    tgtaagaactgaaaagaaa 97
             |||||||||||||||||||
Sbjct: 64771 tgtaagaactgaaaagaaa 64789
to top
>emb|AL671872.10| Mouse DNA sequence from clone RP23-151N17 on chromosome 4, complete
             sequence
          Length = 188386

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 89    gaaaagaaataataacatt 107
             |||||||||||||||||||
Sbjct: 41283 gaaaagaaataataacatt 41301


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,777,529
Number of Sequences: 3902068
Number of extensions: 1777529
Number of successful extensions: 138683
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138378
Number of HSP's gapped (non-prelim): 300
length of query: 144
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 123
effective length of database: 17,151,101,840
effective search space: 2109585526320
effective search space used: 2109585526320
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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