>emb|AL450466.8| Human DNA sequence from clone RP11-315M8 on chromosome 10 Contains a
            CpG island, complete sequence
          Length = 49743

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 79   tctaccagggagagggagggg 99
            |||||||||||||||||||||
Sbjct: 3419 tctaccagggagagggagggg 3399

>emb|AL136984.20| Human DNA sequence from clone RP11-52A20 on chromosome 1q24.1-24.3
              Contains part of the POU2F1 gene for POU domain class 2
              transcription factor 1, complete sequence
          Length = 169627

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 122    gagcatcttctacaaacaaag 142
              |||||||||||||||||||||
Sbjct: 132731 gagcatcttctacaaacaaag 132751

>gb|AC132911.12| Mus musculus chromosome 17, clone RP24-358A14, complete sequence
          Length = 195993

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     tgagctcagctcagctcaagg 50
              |||||||||||||||||||||
Sbjct: 162751 tgagctcagctcagctcaagg 162771

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 131    ctacaaacaaagttacagaca 151
              |||||||||||||||||||||
Sbjct: 501257 ctacaaacaaagttacagaca 501237

>ref|XM_469600.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2604

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  agctcagctcagctcaaggt 51
           ||||||||||||||||||||
Sbjct: 842 agctcagctcagctcaaggt 861

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 32       agctcagctcagctcaaggt 51
                ||||||||||||||||||||
Sbjct: 29312380 agctcagctcagctcaaggt 29312361

>gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 genomic sequence, complete
             sequence
          Length = 139788

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    agctcagctcagctcaaggt 51
             ||||||||||||||||||||
Sbjct: 43620 agctcagctcagctcaaggt 43639

>gb|AC025822.7| Homo sapiens chromosome 10 clone RP11-433J20, complete sequence
          Length = 220031

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     accagggagagggaggggta 101
              ||||||||||||||||||||
Sbjct: 153742 accagggagagggaggggta 153723

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 32       agctcagctcagctcaaggt 51
                ||||||||||||||||||||
Sbjct: 29403802 agctcagctcagctcaaggt 29403783

>gb|AC084557.1|CBRG35I19 Caenorhabditis briggsae cosmid G35I19, complete sequence
          Length = 33489

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   aaacaaagttacagacaagt 154
             ||||||||||||||||||||
Sbjct: 17112 aaacaaagttacagacaagt 17093

>dbj|D16507.1|RICOSH1 Oryza sativa (japonica cultivar-group) OSH1 gene for homeobox
           protein
          Length = 2598

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  agctcagctcagctcaaggt 51
           ||||||||||||||||||||
Sbjct: 842 agctcagctcagctcaaggt 861

>ref|XM_476406.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 5268

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 126  atcttctacaaacaaagtt 144
            |||||||||||||||||||
Sbjct: 1140 atcttctacaaacaaagtt 1158

>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0073K23 map near R10571S, complete sequence
          Length = 161073

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 29    ttgagctcagctcagctca 47
             |||||||||||||||||||
Sbjct: 45073 ttgagctcagctcagctca 45091

>emb|CR762383.11| Zebrafish DNA sequence from clone DKEY-28M7 in linkage group 6,
             complete sequence
          Length = 101572

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 130   tctacaaacaaagttacag 148
             |||||||||||||||||||
Sbjct: 62433 tctacaaacaaagttacag 62451

>emb|AL135913.8| Human DNA sequence from clone RP1-44I20 on chromosome 6, complete
             sequence
          Length = 44006

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    ttaattgagctcagctcag 43
             |||||||||||||||||||
Sbjct: 19001 ttaattgagctcagctcag 18983

>dbj|AK158386.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
           library, clone:F930112B13 product:hypothetical protein,
           full insert sequence
          Length = 3271

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 135 aaacaaagttacagacaag 153
           |||||||||||||||||||
Sbjct: 949 aaacaaagttacagacaag 931

>gb|AC093145.1| Homo sapiens chromosome 7 clone RP11-419A10, complete sequence
          Length = 9494

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 121  agagcatcttctacaaacaaagt 143
            ||||| |||||||||||||||||
Sbjct: 1175 agagcgtcttctacaaacaaagt 1153

>dbj|AK020012.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
          library, clone:5830415P05 product:signaling lymphocyte
          activation molecule, full insert sequence
          Length = 2682

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 29 ttgagctcagctcagctca 47
          |||||||||||||||||||
Sbjct: 66 ttgagctcagctcagctca 48

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 29      ttgagctcagctcagctca 47
               |||||||||||||||||||
Sbjct: 3369221 ttgagctcagctcagctca 3369203

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 60       caattccgatccatcgtct 78
                |||||||||||||||||||
Sbjct: 28158220 caattccgatccatcgtct 28158202

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 31      gagctcagctcagctcaag 49
               |||||||||||||||||||
Sbjct: 7801156 gagctcagctcagctcaag 7801174

>gb|AC009365.9|AC009365 Homo sapiens chromosome 7 clone RP11-355K3, complete sequence
          Length = 222794

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 121    agagcatcttctacaaacaaagt 143
              ||||| |||||||||||||||||
Sbjct: 222670 agagcgtcttctacaaacaaagt 222648

>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0010K01
          Length = 144404

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     gagctcagctcagctcaag 49
              |||||||||||||||||||
Sbjct: 103737 gagctcagctcagctcaag 103755

>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0604E01
          Length = 159049

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 60     caattccgatccatcgtct 78
              |||||||||||||||||||
Sbjct: 155715 caattccgatccatcgtct 155697

>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13
          Length = 80376

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 29  ttgagctcagctcagctca 47
           |||||||||||||||||||
Sbjct: 327 ttgagctcagctcagctca 309

>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0543D10
          Length = 134866

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    caattccgatccatcgtct 78
             |||||||||||||||||||
Sbjct: 41693 caattccgatccatcgtct 41675

>gb|AC007857.2|AC007857 Homo sapiens chromosome 16 clone RPCI-11_523L20, complete sequence
          Length = 147421

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    accagggagagggaggggt 100
             |||||||||||||||||||
Sbjct: 98588 accagggagagggaggggt 98606

>dbj|AK107637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-E10,
          full insert sequence
          Length = 1378

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 32 agctcagctcagctcaagg 50
          |||||||||||||||||||
Sbjct: 1  agctcagctcagctcaagg 19

>dbj|AK106809.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C08,
          full insert sequence
          Length = 2201

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 29 ttgagctcagctcagctca 47
          |||||||||||||||||||
Sbjct: 57 ttgagctcagctcagctca 75

>dbj|AK066442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066H12, full
            insert sequence
          Length = 3218

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 29   ttgagctcagctcagctca 47
            |||||||||||||||||||
Sbjct: 3048 ttgagctcagctcagctca 3030

>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence
          Length = 186431

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   aaacaaagttacagacaag 153
             |||||||||||||||||||
Sbjct: 22531 aaacaaagttacagacaag 22549

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 29      ttgagctcagctcagctca 47
               |||||||||||||||||||
Sbjct: 3377926 ttgagctcagctcagctca 3377908

>emb|AL672073.8| Mouse DNA sequence from clone RP23-333P16 on chromosome X, complete
              sequence
          Length = 216812

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 135    aaacaaagttacagacaag 153
              |||||||||||||||||||
Sbjct: 187542 aaacaaagttacagacaag 187524

>gb|AC130654.2| Mus musculus strain C57BL/6J chromosome 18 clone rp23-410i12, complete
             sequence
          Length = 186254

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 135   aaacaaagttacagacaag 153
             |||||||||||||||||||
Sbjct: 33368 aaacaaagttacagacaag 33350


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,247,948
Number of Sequences: 3902068
Number of extensions: 1247948
Number of successful extensions: 101664
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101386
Number of HSP's gapped (non-prelim): 278
length of query: 192
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 170
effective length of database: 17,147,199,772
effective search space: 2915023961240
effective search space used: 2915023961240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)