>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)|
          Length = 585

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 23/44 (52%), Positives = 28/44 (63%)
 Frame = -3

Query: 326 GGKGWLPADLNDGHLDYYFWLWAGIGAVNFVVYTAFAKNYTVKK 195
           G +GW+  +LN GHLDY+FWL AG+  VN  VY   A  Y  KK
Sbjct: 539 GQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYKQKK 582

>CHL1_ARATH (Q05085) Nitrate/chlorate transporter|
          Length = 590

 Score = 40.8 bits (94), Expect = 9e-04
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = -3

Query: 329 GGGKGWLPADLNDGHLDYYFWLWAGIGAVNFVVYTAFAKNYTVKKVEL 186
           G    W+  DLN G L  ++WL A + A+NF+++  F+K Y  K+  L
Sbjct: 526 GKAHPWIADDLNKGRLYNFYWLVAVLVALNFLIFLVFSKWYVYKEKRL 573

>Y939_METJA (Q58349) Hypothetical protein MJ0939|
          Length = 276

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 6/39 (15%)
 Frame = +3

Query: 48  NILFKWTQLQEFGRYLITSKLY------CRQYIHNKEDK 146
           N    W + ++FGRY+ +SK +      CR+   NK +K
Sbjct: 159 NFRVDWEEREDFGRYIFSSKTFDEMFERCREIFGNKINK 197

>KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subunit (K(+)|
           channel beta-3 subunit) (Kv-beta-3)
          Length = 401

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 10  NRAIALL-HLCFKETFYSNGHNYRNLGDI*LHQSCIVDSTYTT 135
           N+ + LL H+  + T  S G  YRNLG   L  SC+   T+ T
Sbjct: 51  NQVLPLLSHILRESTVKSTGMKYRNLGKSGLRVSCLGLGTWVT 93

>TRUA_SALTY (Q8ZNB9) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 270

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 261 GWDRRGELRCVHGLREELYSEESRAPVNTVC 169
           GW R+ E+R V    E+  S+ +  P+N  C
Sbjct: 25  GWQRQNEVRSVQEKLEKALSQVANEPINVFC 55

>TRUA_SALTI (Q8Z500) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 270

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 261 GWDRRGELRCVHGLREELYSEESRAPVNTVC 169
           GW R+ E+R V    E+  S+ +  P+N  C
Sbjct: 25  GWQRQNEVRSVQEKLEKALSQVANEPINVFC 55

>TRUA_SALPA (Q5PCV6) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 270

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 261 GWDRRGELRCVHGLREELYSEESRAPVNTVC 169
           GW R+ E+R V    E+  S+ +  P+N  C
Sbjct: 25  GWQRQNEVRSVQEKLEKALSQVANEPINVFC 55

>CUBN_HUMAN (O60494) Cubilin precursor (Intrinsic factor-cobalamin receptor)|
           (Intrinsic factor-vitamin B12 receptor) (460 kDa
           receptor) (Intestinal intrinsic factor receptor)
          Length = 3623

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 237 RCVHGLREELYSEESRAPVNTVCCWSQAYSSYPLCCVCTV 118
           RCVHG+ E+L  E++  P  +  C    + S P    CT+
Sbjct: 224 RCVHGICEDLMREQAGEPKYSCVC-DAGWMSSPNSPACTL 262

>BRU1_ARATH (Q6Q4D0) Protein BRUSHY 1 (Protein TONSOKU) (Protein MGOUN 3)|
          Length = 1311

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 222 LREELYSEESRAPVNTVCCWSQAYSSYPLCCVCTVYNTALM*LN 91
           L ++LY  E    +N   C  Q  S+ PL C   V+N A++ L+
Sbjct: 830 LLKKLYISEVEDDINVSECELQDISAAPLLCALHVHNIAMLDLS 873

>SELI_PONPY (Q5NV96) Selenoprotein I|
          Length = 397

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 290 GHLDYYFWLWAGIGAVNFVVYT 225
           GH     W+W  +G +NFV YT
Sbjct: 81  GHKHVPDWVWIVVGILNFVAYT 102

>SELI_HUMAN (Q9C0D9) Selenoprotein I|
          Length = 397

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 290 GHLDYYFWLWAGIGAVNFVVYT 225
           GH     W+W  +G +NFV YT
Sbjct: 81  GHKHVPDWVWIVVGILNFVAYT 102

>LCR36_ARATH (P82751) Putative low-molecular-weight cysteine-rich protein LCR36|
           precursor
          Length = 73

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 135 KEDKNCTLVTNSKPCSPELDFLHCIILREG 224
           K DK C+++ +  PC P    L CI  R G
Sbjct: 23  KGDKRCSIIIDLSPCYPIECRLSCITERNG 52

>TGFB1_CAVPO (Q9Z1Y6) Transforming growth factor beta-1 precursor (TGF-beta-1)|
           [Contains: Latency-associated peptide (LAP)]
          Length = 390

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 14/64 (21%)
 Frame = -2

Query: 264 VGWDRRGELRCVHGLR--------------EELYSEESRAPVNTVCCWSQAYSSYPLCCV 127
           +G  RRG+L  +HG+               + L+S   R  ++T  C+S   S+   CCV
Sbjct: 239 IGPKRRGDLAAIHGMNRPFLLLMATPLERAQHLHSSRHRRGLDTNYCFS---STEKNCCV 295

Query: 126 CTVY 115
             +Y
Sbjct: 296 RQLY 299

>REC16_SCHPO (P40379) Transcriptional activator protein rec16 (Zinc finger|
           protein rep1)
          Length = 472

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 142 SSLLCMYCLQYSFDVIKYRPNSCSCVHLNKMF 47
           S  +C YC +    + K + +  SC H+ ++F
Sbjct: 418 SRFICCYCTKPFLSISKLQEHESSCSHVERLF 449

>Y2672_MYCBO (P67147) UPF0060 membrane protein Mb2672c|
          Length = 110

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 269 WLWAGIGAVNFVVYTAFA 216
           WLWAG+G +   VY  FA
Sbjct: 33  WLWAGLGVIALGVYGFFA 50

>Y2639_MYCTU (P67146) UPF0060 membrane protein Rv2639c/MT2717|
          Length = 110

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 269 WLWAGIGAVNFVVYTAFA 216
           WLWAG+G +   VY  FA
Sbjct: 33  WLWAGLGVIALGVYGFFA 50

>MURD_BORBU (O51532) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 451

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +3

Query: 75  QEFGRYLITSKLYCRQYIHNKEDKNCTLVTNSKPCSPELDFLHCIILREGRVH 233
           Q  G  +I  + YC+ +   K      L +   PC  + D  +C    EG+V+
Sbjct: 213 QTSGIVIIQDQAYCKYFSKFKSKVRVILFSEFNPCDFDQDIFYC---NEGKVY 262

>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)|
           (Trio-associated repeat on actin)
          Length = 2014

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 209 NSSRRPCTQRSSPRRSQP 262
           ++ R PCTQR +PR S P
Sbjct: 414 DNPRTPCTQRDNPRASSP 431



 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 209 NSSRRPCTQRSSPRRSQP 262
           ++ R PCTQR +PR S P
Sbjct: 390 DNPRTPCTQRDNPRASSP 407


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,822,156
Number of Sequences: 219361
Number of extensions: 721810
Number of successful extensions: 1967
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1967
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)