ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl20g05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ANSP_EIMTE (P15744) Sporozoite antigen 31 0.82
2YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in... 30 1.8
3APTH1_YEAST (Q12354) Acyl-protein thioesterase 1 (EC 3.1.2.-) 30 1.8
4I10R2_MOUSE (Q61190) Interleukin-10 receptor beta chain precurso... 29 3.1
5ASLB_ECOLI (P25550) Probable arylsulfatase-activating protein aslB 29 3.1
6RC3H1_HUMAN (Q5TC82) Roquin (RING finger and C3H zinc finger pro... 28 5.3
7LIDS_GAEGR (Q9UUS2) Linoleate diol synthase (EC 1.13.11.44) (Lin... 28 5.3
8COFH_SYNEL (Q8DII8) FO synthase subunit 2 (EC 2.5.1.-) (7,8-dide... 28 5.3
9HXK_SCHMA (Q26609) Hexokinase (EC 2.7.1.1) 28 5.3
10TWK9_CAEEL (Q23435) TWiK family of potassium channels protein 9 27 9.1

>ANSP_EIMTE (P15744) Sporozoite antigen|
          Length = 216

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 258 QGAAAGRSLSSTLPACA-GSLRQVSQYCSSPGTS 356
           QGAAAGRSL    PA A G  +Q S Y + P +S
Sbjct: 175 QGAAAGRSLGYGAPAAAYGQQQQPSSYGAPPASS 208



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>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 231 STSRSPVSSQGAAAGRSLSST--LPACAGSLRQVSQYCSSPGTSVISPLSGT 380
           ++S  P SS  AAA  SLSS+  +P+ + S+   S   +   +S  SPLS +
Sbjct: 18  ASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSS 69



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>APTH1_YEAST (Q12354) Acyl-protein thioesterase 1 (EC 3.1.2.-)|
          Length = 227

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +3

Query: 255 SQGAAAGRSLSSTLPACAGSLRQVSQYCSSPG 350
           SQGAA   + S TLP   G +  +S +CS PG
Sbjct: 119 SQGAALALATSVTLPWKIGGIVALSGFCSIPG 150



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>I10R2_MOUSE (Q61190) Interleukin-10 receptor beta chain precursor (IL-10R-B)|
           (IL-10R2) (Cytokine receptor family 2 member 4)
           (Cytokine receptor class-II member 4) (CRF2-4) (CDw210b
           antigen)
          Length = 349

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 345 EKSSTVIP-DAEILHRLEGWTTSFVQQQLPGMILEIERS 232
           EK   V P D+E+L  LE WTT  +Q Q  G +L+  R+
Sbjct: 165 EKFQVVSPYDSEVLRNLEPWTTYCIQVQ--GFLLDQNRT 201



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>ASLB_ECOLI (P25550) Probable arylsulfatase-activating protein aslB|
          Length = 411

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 5   CPKHALLLEVSALPTLNPHTAS-QRQPAYLPPLFR 106
           CPKH  +L+ S  P LN   A  QR   +LPP  +
Sbjct: 352 CPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLK 386



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>RC3H1_HUMAN (Q5TC82) Roquin (RING finger and C3H zinc finger protein 1)|
          Length = 1133

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 32  VSALPTLNPHTASQRQPAYLPPL 100
           +SALP +NPH+   R PA LPP+
Sbjct: 547 ISALP-VNPHSIPPRGPADLPPM 568



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>LIDS_GAEGR (Q9UUS2) Linoleate diol synthase (EC 1.13.11.44) (Linoleate|
           (8R)-dioxygenase) (Linoleate 8-dioxygenase)
          Length = 978

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = +1

Query: 268 LLDEACRPPFQPVQDLCVRYHSTALLLAHP*SL----RFQVLD 384
           ++ EA +PPF P   LC  Y ++  +L+   SL    RF  +D
Sbjct: 534 IMAEAAKPPFSPGSGLCPPYTTSRAILSDAVSLVRGDRFYTVD 576



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>COFH_SYNEL (Q8DII8) FO synthase subunit 2 (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
           subunit 2)
          Length = 393

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -3

Query: 369 AERSRMCQEK--SSTVIPDAEILHRLEGWTTS 280
           A RS++C EK  ++T +   E  HRL  WTTS
Sbjct: 203 AVRSKICPEKIRTATWLEIVETAHRLGVWTTS 234



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>HXK_SCHMA (Q26609) Hexokinase (EC 2.7.1.1)|
          Length = 451

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 190 SLATHHLVDELLEYRPLDLQYHPRELLLDEACRPPFQPVQDLCVRY 327
           SL T +L D  +E  P  L Y+   +L D+   P  +P+ +  VRY
Sbjct: 322 SLLTRYLTD--VERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRY 365



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>TWK9_CAEEL (Q23435) TWiK family of potassium channels protein 9|
          Length = 475

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 378 YLKAERSRMCQEKSSTVIPDAEILHRLEGWTT 283
           Y KA++ R   +K+S V+PD+E   R E W T
Sbjct: 237 YQKAKKQRNKSQKTSPVMPDSE---RSEVWNT 265


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,088,289
Number of Sequences: 219361
Number of extensions: 768785
Number of successful extensions: 2527
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2527
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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