Clone Name | rbastl20g05 |
---|---|
Clone Library Name | barley_pub |
>ANSP_EIMTE (P15744) Sporozoite antigen| Length = 216 Score = 30.8 bits (68), Expect = 0.82 Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +3 Query: 258 QGAAAGRSLSSTLPACA-GSLRQVSQYCSSPGTS 356 QGAAAGRSL PA A G +Q S Y + P +S Sbjct: 175 QGAAAGRSLGYGAPAAAYGQQQQPSSYGAPPASS 208
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%) Frame = +3 Query: 231 STSRSPVSSQGAAAGRSLSST--LPACAGSLRQVSQYCSSPGTSVISPLSGT 380 ++S P SS AAA SLSS+ +P+ + S+ S + +S SPLS + Sbjct: 18 ASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSS 69
>APTH1_YEAST (Q12354) Acyl-protein thioesterase 1 (EC 3.1.2.-)| Length = 227 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +3 Query: 255 SQGAAAGRSLSSTLPACAGSLRQVSQYCSSPG 350 SQGAA + S TLP G + +S +CS PG Sbjct: 119 SQGAALALATSVTLPWKIGGIVALSGFCSIPG 150
>I10R2_MOUSE (Q61190) Interleukin-10 receptor beta chain precursor (IL-10R-B)| (IL-10R2) (Cytokine receptor family 2 member 4) (Cytokine receptor class-II member 4) (CRF2-4) (CDw210b antigen) Length = 349 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = -3 Query: 345 EKSSTVIP-DAEILHRLEGWTTSFVQQQLPGMILEIERS 232 EK V P D+E+L LE WTT +Q Q G +L+ R+ Sbjct: 165 EKFQVVSPYDSEVLRNLEPWTTYCIQVQ--GFLLDQNRT 201
>ASLB_ECOLI (P25550) Probable arylsulfatase-activating protein aslB| Length = 411 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = +2 Query: 5 CPKHALLLEVSALPTLNPHTAS-QRQPAYLPPLFR 106 CPKH +L+ S P LN A QR +LPP + Sbjct: 352 CPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLK 386
>RC3H1_HUMAN (Q5TC82) Roquin (RING finger and C3H zinc finger protein 1)| Length = 1133 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +2 Query: 32 VSALPTLNPHTASQRQPAYLPPL 100 +SALP +NPH+ R PA LPP+ Sbjct: 547 ISALP-VNPHSIPPRGPADLPPM 568
>LIDS_GAEGR (Q9UUS2) Linoleate diol synthase (EC 1.13.11.44) (Linoleate| (8R)-dioxygenase) (Linoleate 8-dioxygenase) Length = 978 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 268 LLDEACRPPFQPVQDLCVRYHSTALLLAHP*SL----RFQVLD 384 ++ EA +PPF P LC Y ++ +L+ SL RF +D Sbjct: 534 IMAEAAKPPFSPGSGLCPPYTTSRAILSDAVSLVRGDRFYTVD 576
>COFH_SYNEL (Q8DII8) FO synthase subunit 2 (EC 2.5.1.-)| (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2) Length = 393 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = -3 Query: 369 AERSRMCQEK--SSTVIPDAEILHRLEGWTTS 280 A RS++C EK ++T + E HRL WTTS Sbjct: 203 AVRSKICPEKIRTATWLEIVETAHRLGVWTTS 234
>HXK_SCHMA (Q26609) Hexokinase (EC 2.7.1.1)| Length = 451 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +1 Query: 190 SLATHHLVDELLEYRPLDLQYHPRELLLDEACRPPFQPVQDLCVRY 327 SL T +L D +E P L Y+ +L D+ P +P+ + VRY Sbjct: 322 SLLTRYLTD--VERDPAHLLYNTHYMLTDDLHVPVVEPIDNRIVRY 365
>TWK9_CAEEL (Q23435) TWiK family of potassium channels protein 9| Length = 475 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 378 YLKAERSRMCQEKSSTVIPDAEILHRLEGWTT 283 Y KA++ R +K+S V+PD+E R E W T Sbjct: 237 YQKAKKQRNKSQKTSPVMPDSE---RSEVWNT 265 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,088,289 Number of Sequences: 219361 Number of extensions: 768785 Number of successful extensions: 2527 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2475 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2527 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)