>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23,
              complete sequence
          Length = 148736

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 62/68 (91%), Gaps = 3/68 (4%)
 Strand = Plus / Minus

                                                                          
Query: 91     cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 147
              |||||||| ||||||||||||||||||| ||||||||||||||||   |||||||||| |
Sbjct: 127821 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 127762

                      
Query: 148    taattaca 155
              ||||||||
Sbjct: 127761 taattaca 127754



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                       
Query: 298    gaatttgtacttgtctgctgccttctaaaactaggggagga 338
              |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 127623 gaatttgtacttgtctgctgccttctaaaacttggggagga 127583

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 62/68 (91%), Gaps = 3/68 (4%)
 Strand = Plus / Minus

                                                                            
Query: 91       cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 147
                |||||||| ||||||||||||||||||| ||||||||||||||||   |||||||||| |
Sbjct: 20880996 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 20880937

                        
Query: 148      taattaca 155
                ||||||||
Sbjct: 20880936 taattaca 20880929



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                         
Query: 298      gaatttgtacttgtctgctgccttctaaaactaggggagga 338
                |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 20880798 gaatttgtacttgtctgctgccttctaaaacttggggagga 20880758

>dbj|AK066958.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F17, full
            insert sequence
          Length = 3847

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 62/68 (91%), Gaps = 3/68 (4%)
 Strand = Plus / Minus

                                                                        
Query: 91   cttttatcatacaacaccaaaagaatggatcaaaattcataatac---acaacatgatgc 147
            |||||||| ||||||||||||||||||| ||||||||||||||||   |||||||||| |
Sbjct: 3581 cttttatcttacaacaccaaaagaatgggtcaaaattcataatacatgacaacatgatac 3522

                    
Query: 148  taattaca 155
            ||||||||
Sbjct: 3521 taattaca 3514



 Score = 73.8 bits (37), Expect = 3e-10
 Identities = 40/41 (97%)
 Strand = Plus / Minus

                                                     
Query: 298  gaatttgtacttgtctgctgccttctaaaactaggggagga 338
            |||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3383 gaatttgtacttgtctgctgccttctaaaacttggggagga 3343

>ref|XM_472477.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3354

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 308  ttgtctgctgccttctaaaactaggggagga 338
            |||||||||||||||||||||| ||||||||
Sbjct: 3247 ttgtctgctgccttctaaaacttggggagga 3217

>gb|AY109956.1| Zea mays CL7164_1 mRNA sequence
          Length = 1059

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 99  atacaacaccaaaagaatggatcaaaattc 128
           ||||||||||||||||||||||| ||||||
Sbjct: 821 atacaacaccaaaagaatggatcgaaattc 792



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 310 gtctgctgccttctaaaactaggggagga 338
           ||||||||||||||||||||||| |||||
Sbjct: 632 gtctgctgccttctaaaactaggcgagga 604

>dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, map 22, complete
             sequences
          Length = 171187

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 165   ggaaaaaatacaggcaacccaaa 187
             |||||||||||||||||||||||
Sbjct: 47460 ggaaaaaatacaggcaacccaaa 47438

>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0711E10
          Length = 157903

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 176   aggcaacccaaagaaaagagga 197
             ||||||||||||||||||||||
Sbjct: 70537 aggcaacccaaagaaaagagga 70516

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 176     aggcaacccaaagaaaagagga 197
               ||||||||||||||||||||||
Sbjct: 8495384 aggcaacccaaagaaaagagga 8495363

>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0705D01
          Length = 147174

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 176    aggcaacccaaagaaaagagga 197
              ||||||||||||||||||||||
Sbjct: 110339 aggcaacccaaagaaaagagga 110318

>dbj|AP002033.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: F1M23
          Length = 112684

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 87   tgctcttttatcatacaacaccaaaa 112
            |||| |||||||||||||||||||||
Sbjct: 5162 tgcttttttatcatacaacaccaaaa 5187

>gb|AF152363.1|AF152363 Homo sapiens constitutive fragile region FRA3B sequence
          Length = 185763

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 141   atgatgctaattacaatgaatg 162
             ||||||||||||||||||||||
Sbjct: 82911 atgatgctaattacaatgaatg 82932

>gb|U39794.1|HSU39794 Human lambda clone 247 FRA3B region DNA
          Length = 464

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 141 atgatgctaattacaatgaatg 162
           ||||||||||||||||||||||
Sbjct: 216 atgatgctaattacaatgaatg 237

>gb|AC103703.5| Homo sapiens chromosome 17, clone RP11-764D10, complete sequence
          Length = 144240

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 186   aagaaaagaggagcttcctttttca 210
             |||||||||||||||| ||||||||
Sbjct: 93797 aagaaaagaggagcttactttttca 93821

>gb|AC102228.8| Mus musculus chromosome 13, clone RP24-64M1, complete sequence
          Length = 201286

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 305  tacttgtctgctgccttctaa 325
            |||||||||||||||||||||
Sbjct: 5833 tacttgtctgctgccttctaa 5853

>emb|AL606965.20| Mouse DNA sequence from clone RP23-313I15 on chromosome 13 Contains a
              peptidylprolyl isomerase D (cyclophilin D) (Ppid)
              pseudogene and a sperm specific lactate dehydrogenase 3C
              (Ldh3) pseudogene, complete sequence
          Length = 190594

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 42     ttccagtttctggcgattata 62
              |||||||||||||||||||||
Sbjct: 161481 ttccagtttctggcgattata 161501

>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence
          Length = 184868

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    ttccagtttctggcgattata 62
             |||||||||||||||||||||
Sbjct: 93372 ttccagtttctggcgattata 93352

>gb|AC116688.14| Mus musculus chromosome 17, clone RP24-169A20, complete sequence
          Length = 150860

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    ttccagtttctggcgattata 62
             |||||||||||||||||||||
Sbjct: 54968 ttccagtttctggcgattata 54988

>emb|CT030230.13| Mouse DNA sequence from clone RP23-392N1 on chromosome 17, complete
              sequence
          Length = 162981

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 42     ttccagtttctggcgattata 62
              |||||||||||||||||||||
Sbjct: 104574 ttccagtttctggcgattata 104594

>gb|AC127590.3| Mus musculus BAC clone RP23-147I5 from 13, complete sequence
          Length = 208251

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   tacttgtctgctgccttctaa 325
             |||||||||||||||||||||
Sbjct: 72648 tacttgtctgctgccttctaa 72628

>ref|XM_365258.1| Magnaporthe grisea 70-15 hypothetical protein (MG01960.4) partial
            mRNA
          Length = 1170

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  gggagtttagggaagacgcc 233
            ||||||||||||||||||||
Sbjct: 1109 gggagtttagggaagacgcc 1128

>emb|Z73968.1|CEC05A2 Caenorhabditis elegans Cosmid C05A2, complete sequence
          Length = 12509

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    aaaacatggaaatagcaatt 43
             ||||||||||||||||||||
Sbjct: 12007 aaaacatggaaatagcaatt 11988

>gb|AC164614.3| Mus musculus BAC clone RP23-337L12 from chromosome 9, complete sequence
          Length = 215002

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   actatgggagaatttgtact 308
             ||||||||||||||||||||
Sbjct: 48052 actatgggagaatttgtact 48033

>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a
              ribosomal protein L13 (Rpl13) pseudogene, a novel gene and
              two CpG islands, complete sequence
          Length = 215675

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     ttccagtttctggcgattat 61
              ||||||||||||||||||||
Sbjct: 137233 ttccagtttctggcgattat 137252

>emb|AL669903.16| Mouse DNA sequence from clone RP23-72A14 on chromosome 11 Contains a CpG
              island, complete sequence
          Length = 208028

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     ttccagtttctggcgattat 61
              ||||||||||||||||||||
Sbjct: 123116 ttccagtttctggcgattat 123135

>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence
          Length = 172715

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   gatgctaattacaatgaatg 162
             ||||||||||||||||||||
Sbjct: 54630 gatgctaattacaatgaatg 54649

>dbj|AK162045.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820429L09 product:unclassifiable, full
            insert sequence
          Length = 2404

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 289  actatgggagaatttgtact 308
            ||||||||||||||||||||
Sbjct: 1190 actatgggagaatttgtact 1209

>emb|CR533570.6| Zebrafish DNA sequence from clone DKEY-288J18 in linkage group 18,
             complete sequence
          Length = 167352

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   aatgggggaaaaaatacagg 178
             ||||||||||||||||||||
Sbjct: 22223 aatgggggaaaaaatacagg 22204

>emb|AL845481.5| Zebrafish DNA sequence from clone DKEY-46N18 in linkage group 17,
              complete sequence
          Length = 237313

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    aaatgttgctctcagcagtt 266
              ||||||||||||||||||||
Sbjct: 236918 aaatgttgctctcagcagtt 236899

>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    aaaaatacaggcaacccaaa 187
              ||||||||||||||||||||
Sbjct: 122210 aaaaatacaggcaacccaaa 122191

>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete
             sequence
          Length = 223059

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 149   aattacaatgaatgggggaaaaaa 172
             |||||||||| |||||||||||||
Sbjct: 22564 aattacaatgtatgggggaaaaaa 22587

>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete
             sequence
          Length = 209214

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   ataatacacaacatgatgct 148
             ||||||||||||||||||||
Sbjct: 58172 ataatacacaacatgatgct 58153

>gb|AC127569.4| Mus musculus BAC clone RP24-216E20 from 9, complete sequence
          Length = 168588

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 289    actatgggagaatttgtact 308
              ||||||||||||||||||||
Sbjct: 151394 actatgggagaatttgtact 151413

>dbj|AP004953.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34A24, TM0129,
             complete sequence
          Length = 110487

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 178   gcaacccaaagaaaagaggagctt 201
             ||||| ||||||||||||||||||
Sbjct: 68770 gcaacgcaaagaaaagaggagctt 68747

>emb|AL845483.4| Mouse DNA sequence from clone RP23-256M16 on chromosome 2, complete
             sequence
          Length = 184819

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    ttccagtttctggcgattat 61
             ||||||||||||||||||||
Sbjct: 29841 ttccagtttctggcgattat 29860

>dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B5P9, LL56-APP
              region, complete sequence
          Length = 150681

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    aaaaatacaggcaacccaaa 187
              ||||||||||||||||||||
Sbjct: 110433 aaaaatacaggcaacccaaa 110414


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,589,652
Number of Sequences: 3902068
Number of extensions: 4589652
Number of successful extensions: 129549
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129408
Number of HSP's gapped (non-prelim): 141
length of query: 358
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 336
effective length of database: 17,147,199,772
effective search space: 5761459123392
effective search space used: 5761459123392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)