>NADB2_RALSO (Q8XQG4) L-aspartate oxidase 2 (EC 1.4.3.16) (LASPO 2) (Quinolinate|
           synthetase B 2)
          Length = 536

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 301 CLLSSTDAAGVSSRLELALPRRIQ 372
           C  S TD AG +SRL L LP RI+
Sbjct: 396 CAQSVTDTAGSASRLRLTLPERIE 419

>URED_SYNY3 (P73047) Urease accessory protein ureD|
          Length = 270

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 326 AASVDERRQWHAQSWFRYESFGHRAKLSRELI*KLSKKERLY 201
           A++V+    W A  W RY+  GHR ++   L+    K +R +
Sbjct: 4   ASTVNPSAPWQANLWLRYDRPGHRTRMVECLVQAPLKVQRSF 45

>SYK2_MYCTU (P94974) Putative lysyl-tRNA synthetase 2 (EC 6.1.1.6)|
           (Lysine--tRNA ligase 2) (LysRS 2)
          Length = 1172

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 99  VLPLQRRNAVHKGHRP 146
           VLP  RRN VH GH P
Sbjct: 628 VLPFSRRNRVHTGHHP 643

>SYK2_MYCBO (Q7VEV7) Putative lysyl-tRNA synthetase 2 (EC 6.1.1.6)|
           (Lysine--tRNA ligase 2) (LysRS 2)
          Length = 1172

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = +3

Query: 99  VLPLQRRNAVHKGHRP 146
           VLP  RRN VH GH P
Sbjct: 628 VLPFSRRNRVHTGHHP 643

>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)|
          Length = 864

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 393 ACGSMETLNPTRKSKLQAGGDPRRVGRREKA 301
           AC + E ++  + S L+AG  P RVG +EKA
Sbjct: 606 ACETQEEVDSWKASFLRAGVYPERVGDKEKA 636

>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)|
          Length = 851

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 393 ACGSMETLNPTRKSKLQAGGDPRRVGRREKA 301
           AC + E ++  + S L+AG  P RVG +EKA
Sbjct: 606 ACETQEEVDSWKASFLRAGVYPERVGDKEKA 636

>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)|
          Length = 867

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -3

Query: 393 ACGSMETLNPTRKSKLQAGGDPRRVGRREKA 301
           AC + E ++  + S L+AG  P RVG +EKA
Sbjct: 606 ACETQEEVDSWKASFLRAGVYPERVGDKEKA 636

>MHPD_ECOLI (P77608) 2-keto-4-pentenoate hydratase (EC 4.2.1.-)|
           (2-hydroxypentadienoic acid hydratase)
          Length = 269

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 102 EHIIPRIAVNGN*IQDWNFNLPNKVASQLSCFV 4
           E ++P + V G+ I+DW+    + VA   SC V
Sbjct: 131 EWVLPALEVVGSRIRDWSIQFVDTVADNASCGV 163

>Y1356_MYCBO (P64806) Hypothetical protein Mb1356|
          Length = 98

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 335 ETPAASVDERRQWHAQSW 282
           + P A VD+RR WH   W
Sbjct: 68  DLPQAGVDDRRHWHTPCW 85

>Y1322_MYCTU (P64805) Hypothetical protein Rv1322/MT1363.1|
          Length = 98

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 335 ETPAASVDERRQWHAQSW 282
           + P A VD+RR WH   W
Sbjct: 68  DLPQAGVDDRRHWHTPCW 85

>SETB2_HUMAN (Q96T68) Probable histone-lysine N-methyltransferase, H3 lysine-9|
           specific (EC 2.1.1.43) (Histone H3-K9 methyltransferase)
           (H3-K9-HMTase) (SET domain bifurcated 2) (Chronic
           lymphocytic leukemia deletion region gene 8 protein)
          Length = 719

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 268 LSYLNHDCACHCLLSSTDAAGVSSRLELALPRRIQRLHTAT 390
           LSY +HDC+  CL+         + L+L +    QR H  T
Sbjct: 140 LSYQSHDCSGACLMKMPLNLKGENPLQLPIKCHFQRRHAKT 180

>N4BM_HUMAN (O95298) NADH-ubiquinone oxidoreductase subunit B14.5b (EC 1.6.5.3)|
           (EC 1.6.99.3) (Complex I-B14.5b) (CI-B14.5b)
          Length = 119

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = -2

Query: 223 LVRKRDYIYAIRRRELY 173
           LV++ DY+YA+R RE++
Sbjct: 74  LVKREDYLYAVRDREMF 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,245,458
Number of Sequences: 219361
Number of extensions: 941106
Number of successful extensions: 2358
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2358
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)