ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl20f08 |
|---|---|
| Clone Library Name | barley_pub |
>SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1108 Score = 45.1 bits (105), Expect = 4e-05 Identities = 22/68 (32%), Positives = 35/68 (51%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 +N E E EK+R K E+QK + L + M S Y EK P +++E++ KL + Sbjct: 1033 INTEAEQEKIRNKIGELQKQKEKLQKMMSVSTYEEKVPANIKEDNANKLAKILQEFDFFE 1092 Query: 180 EAEKKLDA 157 + +L A Sbjct: 1093 KESARLAA 1100
>SYV_RAT (Q04462) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1264 Score = 44.3 bits (103), Expect = 7e-05 Identities = 25/57 (43%), Positives = 31/57 (54%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEA 175 EL KL+ KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1200 ELGKLQAKRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEVKLQQTEAELRKVDEA 1256
>SYV_FUGRU (P49696) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1217 Score = 43.5 bits (101), Expect = 1e-04 Identities = 22/62 (35%), Positives = 35/62 (56%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 ++ E E+ KL K+ +++K LS+K+ Y+EK P VQE+D KL +L + Sbjct: 1148 IDVEKEVPKLMGKKTDLEKQIEKLSEKISKGDYKEKVPVKVQEQDTEKLRQSQTELEKVK 1207 Query: 180 EA 175 EA Sbjct: 1208 EA 1209
>SYV_HUMAN (P26640) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1264 Score = 42.7 bits (99), Expect = 2e-04 Identities = 25/57 (43%), Positives = 31/57 (54%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEA 175 EL KL+ KR E Q+ L ++ ASGY K P VQE D KL +LR + EA Sbjct: 1200 ELGKLQAKRVEAQRQAQRLRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEA 1256
>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) (Protein G7a) Length = 1263 Score = 42.7 bits (99), Expect = 2e-04 Identities = 24/57 (42%), Positives = 30/57 (52%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEA 175 EL KL+ KR E Q+ L ++ AS Y K P VQE D KL +LR + EA Sbjct: 1199 ELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEAKLQQTEAELRKVDEA 1255
>SYV_ACIAD (Q6F8F0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 971 Score = 39.3 bits (90), Expect = 0.002 Identities = 21/68 (30%), Positives = 39/68 (57%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 ++ + EL +L+K D++QK ++ K+ G+ KAP +V E + KL F QL I Sbjct: 903 IDPKAELGRLQKDLDKVQKQHDQIASKLANEGFVAKAPAAVVEGEKVKLAEFADQLVKIK 962 Query: 180 EAEKKLDA 157 ++ +++ A Sbjct: 963 QSMEQIAA 970
>SYV_CARHZ (Q3AF87) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 878 Score = 37.7 bits (86), Expect = 0.007 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVI 184 ++ E E E+L K+ ++ L+QK+ G+ KAP V ++ KLTAF+ + V+ Sbjct: 809 IDLEKEKERLNKELKKVLAEIERLNQKLNNPGFLAKAPAEVVNKEREKLTAFYREKEVL 867
>SYV_GEOKA (Q5KWL3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 35.4 bits (80), Expect = 0.035 Identities = 17/48 (35%), Positives = 28/48 (58%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 217 +N E E+++L K+ D+ K + +K+ G+ KAP V EE+ RK Sbjct: 813 INIEEEIKRLEKELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRK 860
>SYV_BACST (P11931) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 35.4 bits (80), Expect = 0.035 Identities = 17/48 (35%), Positives = 28/48 (58%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 217 +N E E+++L K+ D+ K + +K+ G+ KAP V EE+ RK Sbjct: 813 INIEEEIKRLEKELDKWNKEVERVEKKLANEGFLAKAPAHVVEEERRK 860
>SYV_CLOTE (Q891R5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 35.0 bits (79), Expect = 0.045 Identities = 18/66 (27%), Positives = 36/66 (54%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 ++ E E+E+L K+R++++K + +K+ + +KAP +V E+ K + L + Sbjct: 814 VDLEKEMERLNKEREKLEKEIERVDKKLSNENFVKKAPEAVVNEEKAKGEKYKEMLEAVL 873 Query: 180 EAEKKL 163 E K L Sbjct: 874 ERIKSL 879
>SYV_BACLD (Q65GK8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 34.7 bits (78), Expect = 0.059 Identities = 15/48 (31%), Positives = 29/48 (60%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 217 +N + E+ +L+K+ D++ K + +K+ G+ +KAP V EE+ K Sbjct: 813 INIDEEISRLQKELDKLTKEVERVQKKLSNEGFMKKAPAHVIEEERAK 860
>SYV_BACHD (Q9K8G8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 34.3 bits (77), Expect = 0.077 Identities = 15/48 (31%), Positives = 29/48 (60%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 217 L+ E E+ +L K+ ++++K + +K+ G+ KAP V EE+ +K Sbjct: 813 LDLEEEIARLEKEENKLEKEVERVQKKLSNQGFLAKAPEKVIEEERKK 860
>SYV_NEIMB (Q9K1H7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 33.9 bits (76), Expect = 0.10 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 214 ++ E +L K+ +++QK L+ K+ GY EKAP + E+D L Sbjct: 878 IDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADL 926
>SYV_NEIMA (Q9JX22) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 33.9 bits (76), Expect = 0.10 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 214 ++ E +L K+ +++QK L+ K+ GY EKAP + E+D L Sbjct: 878 IDKATETARLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADL 926
>SYV_NEIG1 (Q5F5W0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 945 Score = 33.9 bits (76), Expect = 0.10 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 214 ++ E +L K+ +++QK L+ K+ GY EKAP + E+D L Sbjct: 878 IDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKAPAHLVEKDKADL 926
>SYV_BACSK (Q5WEQ4) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 880 Score = 33.5 bits (75), Expect = 0.13 Identities = 18/68 (26%), Positives = 35/68 (51%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 L+ + E+ +L K+ D++ K + +K+ G+ KAP V EE+ K + + + + Sbjct: 813 LDLDKEVARLEKELDKLNKEVERIEKKLNNQGFLAKAPSHVVEEEKAKQQDYAAKRQTVI 872 Query: 180 EAEKKLDA 157 E +L A Sbjct: 873 ERIAELKA 880
>HLYB_TREHY (Q54316) Hemolysin B| Length = 828 Score = 30.0 bits (66), Expect(2) = 0.21 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Frame = -1 Query: 339 EKLRKKRDEIQKLQHALSQKME-ASGYREKAPPSVQEEDMRKLTAFFGQL---RVIGEAE 172 E K RDEI LQ LS+K E REK ++E+D+R + + + R++ Sbjct: 446 EDAAKIRDEITSLQEELSKKEEKCREEREKIETFIEEDDIRHVISEITNIPIKRLLNSES 505 Query: 171 KKL 163 K+L Sbjct: 506 KRL 508 Score = 21.6 bits (44), Expect(2) = 0.21 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = -3 Query: 136 VGSLFLLGPTGI---FVWKLILHLFFADGGDVTFIENS 32 +GS LGPTG+ + K++ F D + I+ S Sbjct: 547 LGSFIFLGPTGVGKTALAKVLSEFMFGDSDALIRIDMS 584
>SYV_THEMA (Q9X2D7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 865 Score = 32.7 bits (73), Expect = 0.22 Identities = 18/49 (36%), Positives = 28/49 (57%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 214 ++ E E E+L++ ++IQK L +K+ + EKAP V EE KL Sbjct: 799 IDFEKEKERLKQIMEKIQKEIDRLEKKLANKDFVEKAPEEVVEETKEKL 847
>SYV_CLOAB (Q97GG8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 881 Score = 32.7 bits (73), Expect = 0.22 Identities = 19/61 (31%), Positives = 33/61 (54%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEAEKK 166 E+E+L K++D+++ + +K+ G+ +KAP SV E + RV GE KK Sbjct: 820 EIERLSKEKDKLKAEIQRVDKKLSNKGFVDKAPESVVEAE-----------RVKGEKYKK 868 Query: 165 L 163 + Sbjct: 869 M 869
>SYV_CHRVO (Q7NUM8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 939 Score = 32.3 bits (72), Expect = 0.29 Identities = 17/54 (31%), Positives = 29/54 (53%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVI 184 E +LRK++ +++ L+ K+E GY +KAP + E D +L +L I Sbjct: 878 ETARLRKEQGKVEAELAKLTAKLEKPGYVDKAPAHLVERDKAQLAELNDKLEKI 931
>SYV_PSYAR (Q4FQL0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 984 Score = 32.3 bits (72), Expect = 0.29 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQL 193 ++ EL +L K D+++ +++K+ G+ KAP V + + KL GQL Sbjct: 916 IDPTAELARLGKSYDKLKGQSEGIARKLGNEGFVSKAPVEVVDAEKAKLAELEGQL 971
>SYV_PELCD (Q3A253) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 899 Score = 32.3 bits (72), Expect = 0.29 Identities = 18/68 (26%), Positives = 38/68 (55%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 ++ + E ++L K+ +++K S+K+ + KAP +V E+D +KL +L ++ Sbjct: 830 IDLDEEQKRLNKEIAKVEKDVLMFSKKLSNESFLAKAPAAVLEKDRQKLADAEEKLSILK 889 Query: 180 EAEKKLDA 157 + +KL A Sbjct: 890 QGLEKLAA 897
>SYV_PASMU (Q9CMK5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 954 Score = 32.3 bits (72), Expect = 0.29 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAF 205 +N E EL +L K+ ++ Q + K+ + KAPP+V E++ K+ + Sbjct: 886 INKEAELARLNKEIEKYQGEIQRIENKLANEAFVAKAPPAVIEKERAKMAEY 937
>Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417| Length = 511 Score = 32.0 bits (71), Expect = 0.38 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 6/61 (9%) Frame = -1 Query: 357 NAEVELEKLRKKRDEIQKLQHALSQKMEA-SGY-----REKAPPSVQEEDMRKLTAFFGQ 196 N E +L + KK++E+ KLQH +K+EA SG +E+ S++EE + +F Sbjct: 109 NLEAQLVIVDKKKEELDKLQHQEIEKLEAISGLSADEAKERLVESLKEEAKTQAQSFIND 168 Query: 195 L 193 + Sbjct: 169 I 169
>GATD_METAC (Q8TR66) Glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.-)| (Glu-ADT subunit D) Length = 424 Score = 31.6 bits (70), Expect = 0.50 Identities = 12/27 (44%), Positives = 20/27 (74%) Frame = +1 Query: 181 TDDPQLPEKGGELPHVLLLDTGGSLLS 261 T++ +LPE G +LP + +L TGG++ S Sbjct: 71 TNEEELPEPGKKLPKIAILSTGGTIAS 97
>SYV_THETH (P96142) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 30.8 bits (68), Expect = 0.85 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 L+ E + K+ E+ L +K+ + G+REKAP V E + +L Q I Sbjct: 796 LDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIR 855 Query: 180 EA 175 EA Sbjct: 856 EA 857
>SYV_THET8 (Q5SJ45) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 30.8 bits (68), Expect = 0.85 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 L+ E + K+ E+ L +K+ + G+REKAP V E + +L Q I Sbjct: 796 LDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIR 855 Query: 180 EA 175 EA Sbjct: 856 EA 857
>SYV_THET2 (Q72JG7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 862 Score = 30.8 bits (68), Expect = 0.85 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 L+ E + K+ E+ L +K+ + G+REKAP V E + +L Q I Sbjct: 796 LDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLRENLEQAERIR 855 Query: 180 EA 175 EA Sbjct: 856 EA 857
>SYV_METCA (Q606C1) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 921 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/68 (25%), Positives = 34/68 (50%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 ++ E EL +L K+ + K L K+ + + KAPP+V E++ +L L + Sbjct: 853 IDKEAELTRLDKEIQRLDKELPRLEGKLGDASFLSKAPPAVVEKEKARLADLQAGLASLV 912 Query: 180 EAEKKLDA 157 ++++ A Sbjct: 913 AQKERIQA 920
>MYH11_MOUSE (O08638) Myosin-11 (Myosin heavy chain, smooth muscle isoform)| (SMMHC) Length = 1972 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = -1 Query: 336 KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQ---EEDMRKLTAFFGQLRVIGEAEKK 166 KLR+ DE LQ L ++MEA E+ ++ + +KL F + V+ E +K+ Sbjct: 1337 KLRQLEDERNSLQDQLDEEMEAKQNLERHVSTLNIQLSDSKKKLQDFASTIEVMEEGKKR 1396 Query: 165 L 163 L Sbjct: 1397 L 1397 Score = 29.6 bits (65), Expect = 1.9 Identities = 15/65 (23%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Frame = -1 Query: 351 EVELEKLRKKRDE-IQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEA 175 E +++++R+K + +++L L Q A +K+ ++++E+ G+LRV+G+A Sbjct: 1191 EAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKSKQTLEKEN----ADLAGELRVLGQA 1246 Query: 174 EKKLD 160 +++++ Sbjct: 1247 KQEVE 1251
>CALD1_MELGA (P13505) Caldesmon, smooth muscle (CDM) (Fragment)| Length = 274 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/46 (34%), Positives = 30/46 (65%) Frame = -1 Query: 354 AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 217 A VEL++L+K+R+E +K+ QK + +E+A ++EE+ +K Sbjct: 23 AAVELDELKKRREERRKILEEEEQKKK----QEEAERKIREEEEKK 64
>MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-related| transcription factor B) (MRTF-B) Length = 1080 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = -1 Query: 351 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEED 226 E ++E+L++K ++ QKL L ++E ++ PP Q D Sbjct: 561 EKQIEELKRKLEQEQKLVEVLKMQLEVEKRGQQRPPDPQPSD 602
>SYV_PSEPK (Q88P76) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/49 (28%), Positives = 28/49 (57%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 214 ++ + EL +L K+ +Q + K+ + + +KAPP+V E++ KL Sbjct: 880 IDKDAELARLNKEIQRLQGEVQRVGGKLSNTAFVDKAPPAVIEKERAKL 928
>CALD1_CHICK (P12957) Caldesmon (CDM)| Length = 771 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/46 (34%), Positives = 30/46 (65%) Frame = -1 Query: 354 AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 217 A VEL++L+K+R+E +K+ QK + +E+A ++EE+ +K Sbjct: 520 AAVELDELKKRREERRKILEEEEQKKK----QEEAERKIREEEEKK 561
>NUF1_YEAST (P32380) Protein NUF1 (Spindle poly body spacer protein SPC110)| Length = 944 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/57 (24%), Positives = 34/57 (59%) Frame = -1 Query: 357 NAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRV 187 N++V+ KLR K DE++ L + L++ ++++ + ++ ++RK T +L++ Sbjct: 256 NSDVQSLKLRSKEDELKNLMNELNE-LKSNAEEKDTQLEFKKNELRKRTNELNELKI 311
>SYV_COXBU (Q83DD0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 920 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/49 (24%), Positives = 29/49 (59%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 214 ++ + E+ +L+K+ ++QK + +K++ Y ++AP V E++ L Sbjct: 852 IDKQTEIARLKKEISKLQKEEEKSLKKLDNPNYLQRAPQEVVEKERLSL 900
>SYV_OCEIH (Q8EPN2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 883 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -1 Query: 351 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 217 E EL K K+ + +QK K+ G+ KAP SV EE+ RK Sbjct: 827 ENELAKWTKEVERVQK-------KLSNQGFVSKAPESVVEEEKRK 864
>MYH11_RABIT (P35748) Myosin-11 (Myosin heavy chain, smooth muscle isoform)| (SMMHC) Length = 1972 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/65 (23%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Frame = -1 Query: 351 EVELEKLRKKRDEI-QKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEA 175 E +++++R+K ++ ++L L Q A +K ++++E+ G+LRV+G+A Sbjct: 1191 EAQVQEMRQKHTQVVEELTEQLEQFKRAKANLDKTKQTLEKEN----ADLAGELRVLGQA 1246 Query: 174 EKKLD 160 +++++ Sbjct: 1247 KQEVE 1251
>CDC37_MOUSE (Q61081) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein| kinase-targeting subunit) (p50Cdc37) Length = 379 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = -1 Query: 357 NAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPP 244 + +VELE+LR + +++K + + QK+E +EK P Sbjct: 77 DGQVELERLRAEAQQLRKEERSWEQKLEDMRKKEKNMP 114
>AMOL2_MOUSE (Q8K371) Angiomotin-like protein 2| Length = 772 Score = 29.3 bits (64), Expect = 2.5 Identities = 24/76 (31%), Positives = 36/76 (47%) Frame = -1 Query: 354 AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEA 175 AE EL K + +++++LQ AL Q A RE+ ++ ++L A Q R G Sbjct: 468 AEEELRKKQAYVEKVERLQQALGQLQAACEKREQLELRLRTRLEQELKALRAQQRQTGTL 527 Query: 174 EKKLDA*SGSAFESAL 127 + GSA SAL Sbjct: 528 AGGGGSHGGSAELSAL 543
>SYV_STAHJ (Q4L703) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 876 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/48 (27%), Positives = 26/48 (54%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 217 ++ + E+ +L K+ D++QK + +K+ + KAP V E+ K Sbjct: 809 IDMDKEIARLEKELDKLQKELDRVDKKLSNENFVNKAPEKVINEEKEK 856
>CDC37_RAT (Q63692) Hsp90 co-chaperone Cdc37 (Hsp90 chaperone protein| kinase-targeting subunit) (p50Cdc37) Length = 379 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -1 Query: 351 EVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPP 244 +VELE+LR + +++K + + QK+E +EK P Sbjct: 79 QVELERLRAEAQQLRKEERSWEQKLEDMRKKEKNMP 114
>FEN_PYRFU (O93634) Flap structure-specific endonuclease (EC 3.1.-.-)| Length = 340 Score = 28.5 bits (62), Expect = 4.2 Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 9/89 (10%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQE-----EDMRKLTAFFG----QL 193 ELEK R+ R+E ++ +K E R+ A + + ED +KL G Q Sbjct: 90 ELEKRREAREEAEEKWREALEKGEIEEARKYAQRATRVNEMLIEDAKKLLELMGIPIVQA 149 Query: 192 RVIGEAEKKLDA*SGSAFESALCFYWDLL 106 GEA+ A GS + SA Y LL Sbjct: 150 PSEGEAQAAYMAAKGSVYASASQDYDSLL 178
>SYV_AQUAE (O67411) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 1165 Score = 28.5 bits (62), Expect = 4.2 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Frame = -1 Query: 360 LNAEVELEKL----RKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQL 193 + V+L+KL KKR+++ K +++K+ + +KAP V E++ + L Sbjct: 1094 IEGHVDLDKLIQSYEKKREKLLKELERVNKKLSNENFLKKAPVEVVEKEKQIKEELENDL 1153 Query: 192 RVIGEAEKKL 163 + + E K L Sbjct: 1154 KKVEEILKVL 1163
>CD2AP_HUMAN (Q9Y5K6) CD2-associated protein (Cas ligand with multiple SH3| domains) (Adapter protein CMS) Length = 639 Score = 28.5 bits (62), Expect = 4.2 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = +1 Query: 64 PQKKGAVSTSKQKCQ*VPI---ETESRLKSTARLRI*FLLSLTDDPQLPEKGGELPHVLL 234 P+K + + K Q V I +TE ++K+ R F T++ +L K GE+ H++ Sbjct: 241 PEKPLILQSLGPKTQSVEITKTDTEGKIKAKEYCRTLFAYEGTNEDELTFKEGEIIHLIS 300 Query: 235 LDTG 246 +TG Sbjct: 301 KETG 304
>CALD1_RAT (Q62736) Non-muscle caldesmon (CDM) (L-caldesmon)| Length = 531 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/47 (36%), Positives = 28/47 (59%) Frame = -1 Query: 354 AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 214 A +ELE+L+KKR+E +K+ Q+ + KA +EE+ R+L Sbjct: 300 AALELEELKKKREERRKVLEEEEQRRKQEEADRKAR---EEEEKRRL 343
>Y157_AQUAE (O66547) Hypothetical protein aq_157 precursor| Length = 162 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG-EAEK 169 ELEK +K E QK AL + +E+ EKA +E+ +++ +LR + EA+ Sbjct: 49 ELEKYQKLIQEKQKKLEALKKSLESKALSEKA----KEKKAKEIEQLEDELRKLQVEAQS 104 Query: 168 KL 163 KL Sbjct: 105 KL 106
>Y1344_SULAC (Q4J946) Putative HTH-type transcriptional regulatory protein| Saci_1344 Length = 305 Score = 28.5 bits (62), Expect = 4.2 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -1 Query: 348 VELEKLRKKRDEIQKLQHALSQKMEASGYR----EKAPPSVQEEDMRKLTAFFGQLRVIG 181 V+ +KLR+KR+E LSQ++ S EK V E KL FG VIG Sbjct: 123 VDSKKLREKREEKNMSLGELSQRLGVSRISVYDYEKEDSYVSIEVAEKLIEIFGD-EVIG 181 Query: 180 EAEKKLDA 157 + K D+ Sbjct: 182 DIIKDYDS 189
>PALM_CHICK (Q9YGL6) Paralemmin| Length = 386 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = -1 Query: 351 EVELE-KLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEED 226 + E+E K R+ D+ ++LQH S+ + E AP S EED Sbjct: 24 QTEIENKRRQLEDDRRQLQHLKSKALRERWLLEGAPSSASEED 66
>MYH11_HUMAN (P35749) Myosin-11 (Myosin heavy chain, smooth muscle isoform)| (SMMHC) Length = 1972 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/65 (23%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Frame = -1 Query: 351 EVELEKLRKKRDE-IQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEA 175 E +++++R+K + +++L L Q A +K ++++E+ G+LRV+G+A Sbjct: 1191 EAQVQEMRQKHAQAVEELTEQLEQFKRAKANLDKNKQTLEKEN----ADLAGELRVLGQA 1246 Query: 174 EKKLD 160 +++++ Sbjct: 1247 KQEVE 1251
>CALD1_HUMAN (Q05682) Caldesmon (CDM)| Length = 793 Score = 28.1 bits (61), Expect = 5.5 Identities = 15/46 (32%), Positives = 30/46 (65%) Frame = -1 Query: 354 AEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRK 217 A +ELE+L+KKR+E +K+ Q+ + +E+A ++EE+ ++ Sbjct: 561 AALELEELKKKREERRKVLEEEEQRRK----QEEADRKLREEEEKR 602
>RAD50_THEMA (Q9X1X1) Probable DNA double-strand break repair rad50 ATPase| Length = 852 Score = 27.7 bits (60), Expect = 7.2 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 18/75 (24%) Frame = -1 Query: 351 EVELEKLRKKRDEIQKLQHALSQKMEASGYR-----------------EKAPPSVQEEDM 223 E +L++ RKK +I++ +H++SQK+ A+ + ++ Q E+M Sbjct: 522 EEKLDEKRKKLRKIEEERHSISQKITAADVQISQIENQLKEIKGEIEAKRETLKEQREEM 581 Query: 222 RKLTA-FFGQLRVIG 181 +L + FF +LR IG Sbjct: 582 DQLKSDFFDRLRKIG 596
>UNG_BORPE (Q7VUM8) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 250 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 243 WGEPSLCNRTLPSSETGHAVTFGFHPSFSLAFRAPLP 353 WG + + L ++ GH V HPS A R P+P Sbjct: 175 WGAHAQAKQALVPADAGHLVLAANHPSPLSARRPPVP 211
>UNG_BORPA (Q7W1Y7) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 250 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 243 WGEPSLCNRTLPSSETGHAVTFGFHPSFSLAFRAPLP 353 WG + + L ++ GH V HPS A R P+P Sbjct: 175 WGAHAQAKQALVPADAGHLVLAANHPSPLSARRPPVP 211
>UNG_BORBR (Q7WQW5) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 250 Score = 27.7 bits (60), Expect = 7.2 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +3 Query: 243 WGEPSLCNRTLPSSETGHAVTFGFHPSFSLAFRAPLP 353 WG + + L ++ GH V HPS A R P+P Sbjct: 175 WGAHAQAKQALVPADAGHLVLAANHPSPLSARRPPVP 211
>CCD13_HUMAN (Q8IYE1) Coiled-coil domain-containing protein 13| Length = 715 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/60 (31%), Positives = 29/60 (48%) Frame = -1 Query: 342 LEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEAEKKL 163 LEKL +RD +Q+ L +K E R K + +M+ L + G L V G + +L Sbjct: 328 LEKLASERDVLQRELEELKKKFEGMRSRNK----LLSSEMKTLKSQMGTLVVKGRHDDEL 383
>EGLN3_RAT (Q62630) Egl nine homolog 3, mitochondrial precursor (EC 1.14.11.-)| (Hypoxia-inducible factor prolyl hydroxylase 3) (HIF-prolyl hydroxylase 3) (HIF-PH3) (SM-20) Length = 355 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/42 (38%), Positives = 19/42 (45%) Frame = +3 Query: 228 PPLGHWGEPSLCNRTLPSSETGHAVTFGFHPSFSLAFRAPLP 353 PP HW P+L RTL S + T FS F+A P Sbjct: 30 PPTSHWASPALGGRTLHYSCRSQSGT-----PFSSEFQATFP 66
>AAAT_MOUSE (P51912) Neutral amino acid transporter B (Insulin-activated amino| acid transporter) (ASC-like Na(+)-dependent neutral amino acid transporter ASCT2) Length = 553 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -2 Query: 263 TERRLPPVSKRRT*GSSPPFSGNCGSSVRLRRN*MRNLAVLLSRLSVSIG 114 + RR P + R S G CGS R+RR NL VLL+ +V G Sbjct: 17 SSRRCPALGSRED--QSAKAGGCCGSRDRVRRCIRANLLVLLTVAAVVAG 64
>SYV_DEIRA (Q9RY06) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 913 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = -1 Query: 342 LEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQ 196 ++K +K+ E+ K K+ G+ +AP V EE+ R++ F Q Sbjct: 853 VKKQQKRLAELDKQIKQAQGKLNNEGFVARAPAEVIEEEKRRVADFGAQ 901
>SERC_SPIOL (P52877) Phosphoserine aminotransferase, chloroplast precursor (EC| 2.6.1.52) (PSAT) Length = 430 Score = 27.3 bits (59), Expect = 9.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +2 Query: 158 ASSFFSASPMTRSCPKKAVSFLMSSSW 238 AS+ FSA P+ P AV ++++ SW Sbjct: 141 ASTQFSAIPLNLCTPDSAVDYIVTGSW 167
>MYH7_HUMAN (P12883) Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)| Length = 1935 Score = 27.3 bits (59), Expect = 9.4 Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIGEAEKK 166 ELEK+RK+ + ++KME E+A S++ E+ + L A ++ E E+K Sbjct: 1525 ELEKVRKQLE---------AEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1575 Query: 165 L 163 L Sbjct: 1576 L 1576
>HSP78_CANAL (Q96UX5) Heat shock protein 78, mitochondrial precursor| Length = 812 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQ-KLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVI 184 + E+ELE LRK+ D++ +H L +++E K E + R + A + Sbjct: 347 MTIEIELESLRKEEDQLSIDRKHKLEKELEVKKSELKELTDQWESEKRAIDAVKNAKSEL 406 Query: 183 GEAEKKLD 160 +A+ +L+ Sbjct: 407 EKAKYELE 414
>SYV_BURPS (Q63TI8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 955 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/68 (23%), Positives = 32/68 (47%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 ++ E E+L K+ ++ + K+ + KAPP+V ++ ++L F L +G Sbjct: 888 IDVAAERERLSKEIARLEGEIVKCNAKLGNEAFVAKAPPAVVAQEQKRLAEFQSTLTKLG 947 Query: 180 EAEKKLDA 157 +L A Sbjct: 948 AQLARLPA 955
>SYV_BURMA (Q62KW5) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 955 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/68 (23%), Positives = 32/68 (47%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLTAFFGQLRVIG 181 ++ E E+L K+ ++ + K+ + KAPP+V ++ ++L F L +G Sbjct: 888 IDVAAERERLSKEIARLEGEIVKCNAKLGNEAFVAKAPPAVVAQEQKRLAEFQSTLTKLG 947 Query: 180 EAEKKLDA 157 +L A Sbjct: 948 AQLARLPA 955
>TBX4_CANFA (Q861Q9) T-box transcription factor TBX4 (T-box protein 4)| Length = 554 Score = 27.3 bits (59), Expect = 9.4 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 246 GEPSLCNRTLPSSETGHAVTFGFHPSFSLAFRAPLPH 356 G PS+C R PS A F + SFSL+ A L + Sbjct: 505 GLPSVCERKPPSPHLNAANEFLYSQSFSLSREASLQY 541
>SYV_GEOSL (Q74BJ6) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 887 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/49 (28%), Positives = 26/49 (53%) Frame = -1 Query: 360 LNAEVELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKL 214 +N E E ++L K+ ++ K +K+E + E+AP V ++ KL Sbjct: 818 VNVEEEEKRLLKEIGKLDKEIEMFGRKLENPSFVERAPADVVAKEREKL 866
>SYV_PSEU2 (Q4ZXI0) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLT 211 EL +L K+ +Q + K+ + + +KAPP V ++ KLT Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLT 929
>SYV_PSESM (Q887M3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLT 211 EL +L K+ +Q + K+ + + +KAPP V ++ KLT Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPDVIAKERAKLT 929
>SYV_PSE14 (Q48MF2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = -1 Query: 345 ELEKLRKKRDEIQKLQHALSQKMEASGYREKAPPSVQEEDMRKLT 211 EL +L K+ +Q + K+ + + +KAPP V ++ KLT Sbjct: 885 ELARLDKEIQRLQGEVQRVGGKLSNAAFVDKAPPEVIAKERAKLT 929 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,743,285 Number of Sequences: 219361 Number of extensions: 997005 Number of successful extensions: 3692 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 3573 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3690 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
