Clone Name | rbastl20f05 |
---|---|
Clone Library Name | barley_pub |
>gb|BC073483.1| Xenopus laevis cDNA clone IMAGE:5570009, partial cds Length = 5458 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 121 aatcttctgcaccttactccc 141 ||||||||||||||||||||| Sbjct: 5287 aatcttctgcaccttactccc 5307
>gb|AC132867.6| Mus musculus chromosome 1, clone RP24-388I23, complete sequence Length = 209151 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 25 ttaaaaacaagtattttcaaa 45 ||||||||||||||||||||| Sbjct: 196127 ttaaaaacaagtattttcaaa 196107
>gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, complete sequence Length = 184206 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ttaaaaacaagtattttcaaa 45 ||||||||||||||||||||| Sbjct: 154018 ttaaaaacaagtattttcaaa 154038
>gb|AC161108.2| Mus musculus chromosome 1, clone RP23-224G12, complete sequence Length = 207067 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 atacaacatcttcttttctt 72 |||||||||||||||||||| Sbjct: 124768 atacaacatcttcttttctt 124787
>gb|AC113039.10| Mus musculus chromosome 1, clone RP23-229P20, complete sequence Length = 172732 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 atacaacatcttcttttctt 72 |||||||||||||||||||| Sbjct: 73677 atacaacatcttcttttctt 73658
>gb|AC132104.3| Mus musculus BAC clone RP24-364N7 from chromosome 9, complete sequence Length = 161545 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ctcccccctacactccattc 156 |||||||||||||||||||| Sbjct: 111178 ctcccccctacactccattc 111159
>emb|AL162571.9| Human DNA sequence from clone RP11-159J2 on chromosome 13 Contains a meningioma expressed antigen 6 (coiled-coil proline-rich) (MGEA6) pseudogene, a novel gene and the 3' end of the TBC1D4 gene for TBC1 domain family, member 4 (KIAA0603), complete sequence Length = 158310 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 acatcttcttttcttcaaaa 77 |||||||||||||||||||| Sbjct: 110454 acatcttcttttcttcaaaa 110435
>ref|NM_001017032.2| Xenopus tropicalis leucine zipper transcription factor-like 1 (lztfl1), mRNA Length = 1230 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gaaggcacgattaaaaacaa 34 |||||||||||||||||||| Sbjct: 564 gaaggcacgattaaaaacaa 583
>gb|AC093435.3| Drosophila melanogaster 3L BAC RP98-7A5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171689 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 caacatcttcttttcttcaa 75 |||||||||||||||||||| Sbjct: 91449 caacatcttcttttcttcaa 91468
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 aaaataatcttctgcacctt 135 |||||||||||||||||||| Sbjct: 838347 aaaataatcttctgcacctt 838366
>emb|CR762013.2| Xenopus tropicalis finished cDNA, clone TEgg003i20 Length = 1230 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 gaaggcacgattaaaaacaa 34 |||||||||||||||||||| Sbjct: 564 gaaggcacgattaaaaacaa 583
>gb|AE003550.4| Drosophila melanogaster chromosome 3L, section 35 of 83 of the complete sequence Length = 304975 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 caacatcttcttttcttcaa 75 |||||||||||||||||||| Sbjct: 113698 caacatcttcttttcttcaa 113679
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 aaaacaagtattttcaaaag 47 |||||||||||||||||||| Sbjct: 799768 aaaacaagtattttcaaaag 799749
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tattttcaaaaggaaggata 55 |||||||||||||||||||| Sbjct: 549093 tattttcaaaaggaaggata 549112 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,734,503 Number of Sequences: 3902068 Number of extensions: 2734503 Number of successful extensions: 238590 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 238357 Number of HSP's gapped (non-prelim): 233 length of query: 205 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 183 effective length of database: 17,147,199,772 effective search space: 3137937558276 effective search space used: 3137937558276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)