ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl20f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NG_002392.2| Homo sapiens major histocompatibility complex, ... 44 0.100
2ref|NG_002432.1| Homo sapiens major histocompatibility complex, ... 44 0.100
3emb|Z84814.1|HS172K2 Human DNA sequence from clone RP1-172K2 on ... 44 0.100
4emb|AL935032.13| Human DNA sequence from clone DAQB-184K4 on chr... 44 0.100
5emb|BX120007.9| Human DNA sequence from clone DASS-397D15 on chr... 44 0.100
6emb|AL845554.2| Human DNA sequence from clone XXbac-495H8 on chr... 44 0.100
7emb|AL670296.7| Human DNA sequence from clone XXbac-213L12 on ch... 44 0.100
8emb|CR759779.6| Human DNA sequence from clone DAMC-16P5 on chrom... 44 0.100
9emb|CR354545.5| Human DNA sequence from clone DAMA-224B5 on chro... 44 0.100
10emb|CR759919.3| Human DNA sequence from clone DAAP-380K20 on chr... 44 0.100
11gb|AC103724.2| Homo sapiens chromosome 8, clone RP11-589C21, com... 42 0.39
12gb|AC060761.10| Mus musculus chromosome 17, clone RP23-218D19, c... 42 0.39
13gb|AF022814.1|AF022814 Fugu rubripes transcription factor (SLP-1... 42 0.39
14gb|BC076320.1| Danio rerio zgc:92858, mRNA (cDNA clone MGC:92858... 40 1.6
15gb|AC114657.8| Mus musculus chromosome 5, clone RP24-161C20, com... 40 1.6
16emb|CR456632.10| Zebrafish DNA sequence from clone CH211-86M22 i... 40 1.6
17gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, comple... 40 1.6
18emb|CR318663.12| Zebrafish DNA sequence from clone CH211-214J5 i... 40 1.6
19emb|BX323561.7| Zebrafish DNA sequence from clone DKEYP-113G3, c... 40 1.6
20gb|AC020550.4| Homo sapiens BAC clone RP11-198M19 from 2, comple... 40 1.6
21gb|AC161016.4| Pan troglodytes BAC clone CH251-347N20 from chrom... 40 1.6
22ref|NM_001002488.1| Danio rerio zgc:92858 (zgc:92858), mRNA 40 1.6
23gb|AC158648.2| Mus musculus 6 BAC RP23-431M16 (Roswell Park Canc... 40 1.6
24gb|AC153574.4| Mus musculus 6 BAC RP23-265B8 (Roswell Park Cance... 40 1.6
25emb|BX649441.5| Zebrafish DNA sequence from clone DKEYP-3B1 in l... 40 1.6
26dbj|AP000826.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 1.6
27gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 38 6.2
28gb|AC134592.5| Mus musculus BAC clone RP23-381O3 from chromosome... 38 6.2
29gb|AC127269.3| Mus musculus BAC clone RP23-432B20 from chromosom... 38 6.2
30gb|AC117616.8| Mus musculus chromosome 9, clone RP23-111P13, com... 38 6.2
31gb|AC087699.11| Homo sapiens chromosome 15, clone RP11-64K10, co... 38 6.2
32emb|CR361562.12| Zebrafish DNA sequence from clone CH211-281H24 ... 38 6.2
33gb|AC121980.2| Mus musculus BAC clone RP24-290F15 from 1, comple... 38 6.2
34gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete se... 38 6.2
35emb|AL663087.14| Mouse DNA sequence from clone RP23-431M5 on chr... 38 6.2
36emb|CR626868.8| Zebrafish DNA sequence from clone DKEY-164P4 in ... 38 6.2
37emb|AL671863.6| Mouse DNA sequence from clone RP23-88N4 on chrom... 38 6.2
38gb|AC148484.17| Medicago truncatula clone mth2-46g10, complete s... 38 6.2
39gb|AC123595.1| Homo sapiens chromosome 5 clone RP11-213H15, comp... 38 6.2
40gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete seq... 38 6.2
41gb|AY965679.1| Eptatretus burgeri variable lymphocyte receptor B... 38 6.2
42gb|AC093281.2| Homo sapiens chromosome 5 clone RP11-414H23, comp... 38 6.2
43gb|AC099027.1| Drosophila melanogaster, chromosome 2R, region 53... 38 6.2
44dbj|AK051546.1| Mus musculus 12 days embryo spinal ganglion cDNA... 38 6.2
45emb|BX296527.6| Zebrafish DNA sequence from clone DKEYP-32C3 in ... 38 6.2
46gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, r... 38 6.2
47gb|AC093912.2| Homo sapiens BAC clone RP11-766E1 from 2, complet... 38 6.2
48dbj|AP000054.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 38 6.2
49gb|AC016679.9| Homo sapiens BAC clone RP11-58C7 from 2, complete... 38 6.2
50emb|BX284691.5| Zebrafish DNA sequence from clone CH211-224J19 i... 38 6.2
51gb|AY962392.1| Aeromonas phage 31, complete genome 38 6.2
52dbj|BS000191.1| Pan troglodytes chromosome 22 clone:PTB-015O01, ... 38 6.2
53dbj|BS000190.1| Pan troglodytes chromosome 22 clone:RP43-031M16,... 38 6.2
54emb|AL929109.5| Zebrafish DNA sequence from clone CH211-134D6, c... 38 6.2
55emb|CR548625.11| Zebrafish DNA sequence from clone CH211-139E14 ... 38 6.2
56gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43... 38 6.2
57dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 6.2
58gb|AC101658.8| Mus musculus chromosome 7, clone RP23-470G18, com... 38 6.2
59emb|BX927101.19| Zebrafish DNA sequence from clone CH211-120F16 ... 38 6.2
60gb|AC004249.1|AC004249 Drosophila melanogaster (P1 DS00649 (D167... 38 6.2
61gb|AC148919.1| Gallus gallus BAC clone CH261-43B19 from chromoso... 38 6.2
62dbj|AP000326.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 38 6.2
63dbj|AP000169.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 38 6.2 
>ref|NG_002392.2| Homo sapiens major histocompatibility complex, class II, DR52 haplotype
             (DR52) on chromosome 6
          Length = 139182

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 91    ctggcctgcctgcctgttgcct 112
             ||||||||||||||||||||||
Sbjct: 21679 ctggcctgcctgcctgttgcct 21700
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>ref|NG_002432.1| Homo sapiens major histocompatibility complex, class II, DR51
            haplotype (DR51) on chromosome 6
          Length = 137374

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 91   ctggcctgcctgcctgttgcct 112
            ||||||||||||||||||||||
Sbjct: 4656 ctggcctgcctgcctgttgcct 4677
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>emb|Z84814.1|HS172K2 Human DNA sequence from clone RP1-172K2 on chromosome 6p21.1-21.3
             Contains the HLA-DRB3, HLA-DRB9 and HLA-DRA genes for
             major histocompatibility complex class II DR beta 3*01012,
             beta 9 (pseudogene) and alpha and the 5' end of the BTNL2
             gene encoding MHC class II associated butyrophilin-like 2.
             Contains a CpG island, ESTs, STSs and GSSs, complete
             sequence
          Length = 131234

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 91    ctggcctgcctgcctgttgcct 112
             ||||||||||||||||||||||
Sbjct: 77786 ctggcctgcctgcctgttgcct 77765
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>emb|AL935032.13| Human DNA sequence from clone DAQB-184K4 on chromosome 6 Contains the
             HCG23 gene for HLA complex group 23, 2 fragments of BTNL2
             gene for butyrophilin-like 2 (MHC class II associated),
             the HLA-DRA gene for the major histocompatibility complex,
             class II, DR alpha (HLA-DRA1), the 3' end of the
             pseudogene HLA-DRB9 for major histocompatibility complex,
             class II, DR beta 9 and one CpG island, complete sequence
          Length = 95263

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 91    ctggcctgcctgcctgttgcct 112
             ||||||||||||||||||||||
Sbjct: 81451 ctggcctgcctgcctgttgcct 81472
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>emb|BX120007.9| Human DNA sequence from clone DASS-397D15 on chromosome 6, complete
             sequence
          Length = 109682

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 91    ctggcctgcctgcctgttgcct 112
             ||||||||||||||||||||||
Sbjct: 21330 ctggcctgcctgcctgttgcct 21351
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>emb|AL845554.2| Human DNA sequence from clone XXbac-495H8 on chromosome 6 Contains
            the 3' end of the HLA-DRB9 pseudogene for major
            histocompatibility complex, class II, DR beta 9 and no
            CpG islands, complete sequence
          Length = 15327

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 91   ctggcctgcctgcctgttgcct 112
            ||||||||||||||||||||||
Sbjct: 4656 ctggcctgcctgcctgttgcct 4677
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>emb|AL670296.7| Human DNA sequence from clone XXbac-213L12 on chromosome 6 contains the
              5' end of the gene for chromosome 6 open reading frame 10,
              a putative novel transcript, the BTNL2 gene for
              butyrophilin-like 2, the HLA-DRA gene for major
              histocompatibility complex, class II, DR alpha, the major
              histocompatibility complex, class II, DR beta 9 pseudogene
              and one CpG island, complete sequence
          Length = 160623

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 91     ctggcctgcctgcctgttgcct 112
              ||||||||||||||||||||||
Sbjct: 132152 ctggcctgcctgcctgttgcct 132173
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>emb|CR759779.6| Human DNA sequence from clone DAMC-16P5 on chromosome 6, complete
             sequence
          Length = 38590

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 91    ctggcctgcctgcctgttgcct 112
             ||||||||||||||||||||||
Sbjct: 29353 ctggcctgcctgcctgttgcct 29374
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>emb|CR354545.5| Human DNA sequence from clone DAMA-224B5 on chromosome 6, complete
             sequence
          Length = 56495

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 91    ctggcctgcctgcctgttgcct 112
             ||||||||||||||||||||||
Sbjct: 25902 ctggcctgcctgcctgttgcct 25923
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>emb|CR759919.3| Human DNA sequence from clone DAAP-380K20 on chromosome 6, complete
            sequence
          Length = 26676

 Score = 44.1 bits (22), Expect = 0.100
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 91   ctggcctgcctgcctgttgcct 112
            ||||||||||||||||||||||
Sbjct: 3349 ctggcctgcctgcctgttgcct 3370
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>gb|AC103724.2| Homo sapiens chromosome 8, clone RP11-589C21, complete sequence
          Length = 162566

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    ttcaaaaccaaaatatgatat 66
             |||||||||||||||||||||
Sbjct: 16689 ttcaaaaccaaaatatgatat 16669
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>gb|AC060761.10| Mus musculus chromosome 17, clone RP23-218D19, complete sequence
          Length = 228922

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    cttcaaaaccaaaatatgata 65
             |||||||||||||||||||||
Sbjct: 29838 cttcaaaaccaaaatatgata 29858
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>gb|AF022814.1|AF022814 Fugu rubripes transcription factor (SLP-1) and heme-oxygenase genes,
             complete cds
          Length = 37400

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    ctggcctgcctgcctgttgcc 111
             |||||||||||||||||||||
Sbjct: 17217 ctggcctgcctgcctgttgcc 17237
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>gb|BC076320.1| Danio rerio zgc:92858, mRNA (cDNA clone MGC:92858 IMAGE:7117034),
            complete cds
          Length = 1794

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 54   caaaatatgatatacatgtg 73
            ||||||||||||||||||||
Sbjct: 1403 caaaatatgatatacatgtg 1384
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>gb|AC114657.8| Mus musculus chromosome 5, clone RP24-161C20, complete sequence
          Length = 161173

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     gagtttacttagatctggcctgcc 100
              ||||||||| ||||||||||||||
Sbjct: 104715 gagtttactgagatctggcctgcc 104738
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>emb|CR456632.10| Zebrafish DNA sequence from clone CH211-86M22 in linkage group 12,
             complete sequence
          Length = 173539

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    caaaatatgatatacatgtg 73
             ||||||||||||||||||||
Sbjct: 48454 caaaatatgatatacatgtg 48435
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>gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, complete sequence
          Length = 173627

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aaaatatgatatacatgtgc 74
              ||||||||||||||||||||
Sbjct: 153405 aaaatatgatatacatgtgc 153386
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>emb|CR318663.12| Zebrafish DNA sequence from clone CH211-214J5 in linkage group 12,
              complete sequence
          Length = 215046

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     caaaatatgatatacatgtg 73
              ||||||||||||||||||||
Sbjct: 134058 caaaatatgatatacatgtg 134077
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>emb|BX323561.7| Zebrafish DNA sequence from clone DKEYP-113G3, complete sequence
          Length = 167995

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     ccttcaaaaccaaaatatga 63
              ||||||||||||||||||||
Sbjct: 132899 ccttcaaaaccaaaatatga 132880
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>gb|AC020550.4| Homo sapiens BAC clone RP11-198M19 from 2, complete sequence
          Length = 172813

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   tgttgcctgattgctagcac 124
             ||||||||||||||||||||
Sbjct: 70733 tgttgcctgattgctagcac 70714
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>gb|AC161016.4| Pan troglodytes BAC clone CH251-347N20 from chromosome unknown,
             complete sequence
          Length = 148333

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   tgttgcctgattgctagcac 124
             ||||||||||||||||||||
Sbjct: 66869 tgttgcctgattgctagcac 66850
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>ref|NM_001002488.1| Danio rerio zgc:92858 (zgc:92858), mRNA
          Length = 1794

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 54   caaaatatgatatacatgtg 73
            ||||||||||||||||||||
Sbjct: 1403 caaaatatgatatacatgtg 1384
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>gb|AC158648.2| Mus musculus 6 BAC RP23-431M16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205189

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    gcctgcctgcctgttgcctg 113
             ||||||||||||||||||||
Sbjct: 78003 gcctgcctgcctgttgcctg 78022
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>gb|AC153574.4| Mus musculus 6 BAC RP23-265B8 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 176152

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 94   gcctgcctgcctgttgcctg 113
            ||||||||||||||||||||
Sbjct: 1609 gcctgcctgcctgttgcctg 1590
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>emb|BX649441.5| Zebrafish DNA sequence from clone DKEYP-3B1 in linkage group 20,
             complete sequence
          Length = 114252

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    ccttcaaaaccaaaatatga 63
             ||||||||||||||||||||
Sbjct: 27944 ccttcaaaaccaaaatatga 27963
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>dbj|AP000826.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-709H4, complete
              sequence
          Length = 167660

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     tcaaaaccaaaatatgatat 66
              ||||||||||||||||||||
Sbjct: 159262 tcaaaaccaaaatatgatat 159281



 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     tcaaaaccaaaatatgata 65
              |||||||||||||||||||
Sbjct: 156053 tcaaaaccaaaatatgata 156071
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 95      cctgcctgcctgttgcctg 113
               |||||||||||||||||||
Sbjct: 3633163 cctgcctgcctgttgcctg 3633145
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>gb|AC134592.5| Mus musculus BAC clone RP23-381O3 from chromosome 9, complete sequence
          Length = 184917

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    tctggcctgcctgcctgtt 108
             |||||||||||||||||||
Sbjct: 37578 tctggcctgcctgcctgtt 37560
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>gb|AC127269.3| Mus musculus BAC clone RP23-432B20 from chromosome 9, complete sequence
          Length = 212660

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    tctggcctgcctgcctgtt 108
             |||||||||||||||||||
Sbjct: 28349 tctggcctgcctgcctgtt 28367
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>gb|AC117616.8| Mus musculus chromosome 9, clone RP23-111P13, complete sequence
          Length = 242288

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    tctggcctgcctgcctgtt 108
             |||||||||||||||||||
Sbjct: 73862 tctggcctgcctgcctgtt 73844
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>gb|AC087699.11| Homo sapiens chromosome 15, clone RP11-64K10, complete sequence
          Length = 149287

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 45     cttcaaaaccaaaatatga 63
              |||||||||||||||||||
Sbjct: 102863 cttcaaaaccaaaatatga 102845
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>emb|CR361562.12| Zebrafish DNA sequence from clone CH211-281H24 in linkage group 8,
             complete sequence
          Length = 160720

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    caaaaccaaaatatgatat 66
             |||||||||||||||||||
Sbjct: 39548 caaaaccaaaatatgatat 39566
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>gb|AC121980.2| Mus musculus BAC clone RP24-290F15 from 1, complete sequence
          Length = 129142

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 89    atctggcctgcctgcctgttgcc 111
             |||| ||||||||||||||||||
Sbjct: 26443 atcttgcctgcctgcctgttgcc 26421
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>gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete sequence
          Length = 134939

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    aaaaccaaaatatgatata 67
             |||||||||||||||||||
Sbjct: 50141 aaaaccaaaatatgatata 50123
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>emb|AL663087.14| Mouse DNA sequence from clone RP23-431M5 on chromosome 11 Contains the 5'
              end of the Grb10 gene for growth factor receptor bound
              protein 10, a nucleosome assembly protein 1-like 1 (Nap1l1)
              pseudogene and three CpG islands, complete sequence
          Length = 174389

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 42     atccttcaaaaccaaaata 60
              |||||||||||||||||||
Sbjct: 130280 atccttcaaaaccaaaata 130298
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>emb|CR626868.8| Zebrafish DNA sequence from clone DKEY-164P4 in linkage group 14,
             complete sequence
          Length = 75430

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    caaaaccaaaatatgatat 66
             |||||||||||||||||||
Sbjct: 23411 caaaaccaaaatatgatat 23429
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>emb|AL671863.6| Mouse DNA sequence from clone RP23-88N4 on chromosome 11, complete
             sequence
          Length = 108660

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    catccttcaaaaccaaaat 59
             |||||||||||||||||||
Sbjct: 67587 catccttcaaaaccaaaat 67569
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>gb|AC148484.17| Medicago truncatula clone mth2-46g10, complete sequence
          Length = 130381

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 49    aaaaccaaaatatgatata 67
             |||||||||||||||||||
Sbjct: 14171 aaaaccaaaatatgatata 14189
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>gb|AC123595.1| Homo sapiens chromosome 5 clone RP11-213H15, complete sequence
          Length = 174874

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 55     aaaatatgatatacatgtg 73
              |||||||||||||||||||
Sbjct: 159139 aaaatatgatatacatgtg 159157
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>gb|AC122164.6| Medicago truncatula clone mth2-24h4, complete sequence
          Length = 112428

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 55    aaaatatgatatacatgtg 73
             |||||||||||||||||||
Sbjct: 30732 aaaatatgatatacatgtg 30750
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>gb|AY965679.1| Eptatretus burgeri variable lymphocyte receptor B (VLRB) gene, complete
             cds
          Length = 91972

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    catccttcaaaaccaaaat 59
             |||||||||||||||||||
Sbjct: 78602 catccttcaaaaccaaaat 78584
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>gb|AC093281.2| Homo sapiens chromosome 5 clone RP11-414H23, complete sequence
          Length = 167455

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 55     aaaatatgatatacatgtg 73
              |||||||||||||||||||
Sbjct: 144791 aaaatatgatatacatgtg 144773
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>gb|AC099027.1| Drosophila melanogaster, chromosome 2R, region 53C-53D, BAC clone
              BACR06I15, complete sequence
          Length = 185425

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 90     tctggcctgcctgcctgtt 108
              |||||||||||||||||||
Sbjct: 158443 tctggcctgcctgcctgtt 158425
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>dbj|AK051546.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130055M19
            product:unclassifiable, full insert sequence
          Length = 3248

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 89   atctggcctgcctgcctgttgcc 111
            |||| ||||||||||||||||||
Sbjct: 2446 atcttgcctgcctgcctgttgcc 2468
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>emb|BX296527.6| Zebrafish DNA sequence from clone DKEYP-32C3 in linkage group 2,
             complete sequence
          Length = 185706

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    aaaaccaaaatatgatata 67
             |||||||||||||||||||
Sbjct: 86029 aaaaccaaaatatgatata 86011
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>gb|AC008230.4|AC008230 Drosophila melanogaster, chromosome 2R, region 53A-53C, BAC clone
              BACR17I17, complete sequence
          Length = 159640

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 90     tctggcctgcctgcctgtt 108
              |||||||||||||||||||
Sbjct: 151306 tctggcctgcctgcctgtt 151324
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>gb|AC093912.2| Homo sapiens BAC clone RP11-766E1 from 2, complete sequence
          Length = 194167

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 61    tgatatacatgtgcgagagttta 83
             |||||||||||||| ||||||||
Sbjct: 55454 tgatatacatgtgcaagagttta 55432
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>dbj|AP000054.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 25/28, complete
             sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    tcaaaaccaaaatatgata 65
             |||||||||||||||||||
Sbjct: 80402 tcaaaaccaaaatatgata 80420
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>gb|AC016679.9| Homo sapiens BAC clone RP11-58C7 from 2, complete sequence
          Length = 89212

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 49    aaaaccaaaatatgatata 67
             |||||||||||||||||||
Sbjct: 14637 aaaaccaaaatatgatata 14655
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>emb|BX284691.5| Zebrafish DNA sequence from clone CH211-224J19 in linkage group 2,
             complete sequence
          Length = 174775

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 49    aaaaccaaaatatgatata 67
             |||||||||||||||||||
Sbjct: 48962 aaaaccaaaatatgatata 48980
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>gb|AY962392.1| Aeromonas phage 31, complete genome
          Length = 172963

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 105    tgttgcctgattgctagca 123
              |||||||||||||||||||
Sbjct: 148966 tgttgcctgattgctagca 148948
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>dbj|BS000191.1| Pan troglodytes chromosome 22 clone:PTB-015O01, map 22, complete
             sequences
          Length = 155412

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    tcaaaaccaaaatatgata 65
             |||||||||||||||||||
Sbjct: 28269 tcaaaaccaaaatatgata 28287
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>dbj|BS000190.1| Pan troglodytes chromosome 22 clone:RP43-031M16, map 22, complete
              sequences
          Length = 153118

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     tcaaaaccaaaatatgata 65
              |||||||||||||||||||
Sbjct: 141205 tcaaaaccaaaatatgata 141223
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>emb|AL929109.5| Zebrafish DNA sequence from clone CH211-134D6, complete sequence
          Length = 197991

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     caaaaccaaaatatgatat 66
              |||||||||||||||||||
Sbjct: 126359 caaaaccaaaatatgatat 126377
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>emb|CR548625.11| Zebrafish DNA sequence from clone CH211-139E14 in linkage group 19,
             complete sequence
          Length = 195124

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 48    caaaaccaaaatatgatat 66
             |||||||||||||||||||
Sbjct: 27680 caaaaccaaaatatgatat 27662
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>gb|AE003807.3| Drosophila melanogaster chromosome 2R, section 43 of 73 of the complete
              sequence
          Length = 258223

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 90     tctggcctgcctgcctgtt 108
              |||||||||||||||||||
Sbjct: 210371 tctggcctgcctgcctgtt 210389
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>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     tcaaaaccaaaatatgata 65
              |||||||||||||||||||
Sbjct: 162611 tcaaaaccaaaatatgata 162629
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>gb|AC101658.8| Mus musculus chromosome 7, clone RP23-470G18, complete sequence
          Length = 185449

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 90    tctggcctgcctgcctgtt 108
             |||||||||||||||||||
Sbjct: 42512 tctggcctgcctgcctgtt 42530
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>emb|BX927101.19| Zebrafish DNA sequence from clone CH211-120F16 in linkage group 2,
            complete sequence
          Length = 162145

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 49   aaaaccaaaatatgatata 67
            |||||||||||||||||||
Sbjct: 7426 aaaaccaaaatatgatata 7444
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>gb|AC004249.1|AC004249 Drosophila melanogaster (P1 DS00649 (D167)) DNA sequence, complete
             sequence
          Length = 79660

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    tctggcctgcctgcctgtt 108
             |||||||||||||||||||
Sbjct: 27082 tctggcctgcctgcctgtt 27064
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>gb|AC148919.1| Gallus gallus BAC clone CH261-43B19 from chromosome unknown, complete
              sequence
          Length = 163278

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 46     ttcaaaaccaaaatatgat 64
              |||||||||||||||||||
Sbjct: 108269 ttcaaaaccaaaatatgat 108251
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>dbj|AP000326.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:PQ125H6, complete sequence
          Length = 83762

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    tcaaaaccaaaatatgata 65
             |||||||||||||||||||
Sbjct: 62653 tcaaaaccaaaatatgata 62671
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>dbj|AP000169.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             B2344F14-f50E8, segment 5/9, complete sequence
          Length = 100000

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    tcaaaaccaaaatatgata 65
             |||||||||||||||||||
Sbjct: 72370 tcaaaaccaaaatatgata 72388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,309,226
Number of Sequences: 3902068
Number of extensions: 1309226
Number of successful extensions: 142966
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142825
Number of HSP's gapped (non-prelim): 141
length of query: 131
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 110
effective length of database: 17,151,101,840
effective search space: 1886621202400
effective search space used: 1886621202400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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