ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl20f02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IRA1_YEAST (P18963) Inhibitory regulator protein IRA1 29 4.1

>IRA1_YEAST (P18963) Inhibitory regulator protein IRA1|
          Length = 3092

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +2

Query: 194  Y*LGMLLVEEEEKGPARNQLLWFDL*LEGISSAVVVERVGAHAL 325
            Y L  L V+E     A  Q +WF L L+G  + V+VE + +HAL
Sbjct: 2459 YSLIRLTVKEPNFTTAYLQQIWFLLALDGRLTNVIVEEIVSHAL 2502


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,308,878
Number of Sequences: 219361
Number of extensions: 1070447
Number of successful extensions: 2131
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2131
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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