>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 3e-26
 Identities = 147/174 (84%), Gaps = 3/174 (1%)
 Strand = Plus / Minus

                                                                            
Query: 251      ctactttggttcgacctttgactggaaggaatatcctccgctgtagtcgtcgagcgagtc 310
                |||||| ||||||| ||| || ||||||||||| |||||||||||||||   | ||||||
Sbjct: 12095949 ctacttcggttcgatcttggattggaaggaataccctccgctgtagtcg---aacgagtc 12095893

                                                                            
Query: 311      ggtgctcatgcccttgtccttgtttgggagaggatcattgtaagggtggcgaggagcgct 370
                |||||||||| |||||||||| || ||||||||||| |||||||| ||||| || || | 
Sbjct: 12095892 ggtgctcatgtccttgtccttcttcgggagaggatcgttgtaaggatggcgtggggcacc 12095833

                                                                      
Query: 371      tttagtgacatcgaagtccgtcgcagacgtggaggcggacgtcgaggcgctgct 424
                 || ||||| ||||| |||||||| ||||| || || ||||| |||||||||||
Sbjct: 12095832 cttggtgacgtcgaactccgtcgcggacgtcgacgccgacgtggaggcgctgct 12095779

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 3e-26
 Identities = 147/174 (84%), Gaps = 3/174 (1%)
 Strand = Plus / Minus

                                                                            
Query: 251      ctactttggttcgacctttgactggaaggaatatcctccgctgtagtcgtcgagcgagtc 310
                |||||| ||||||| ||| || ||||||||||| |||||||||||||||   | ||||||
Sbjct: 12092712 ctacttcggttcgatcttggattggaaggaataccctccgctgtagtcg---aacgagtc 12092656

                                                                            
Query: 311      ggtgctcatgcccttgtccttgtttgggagaggatcattgtaagggtggcgaggagcgct 370
                |||||||||| |||||||||| || ||||||||||| |||||||| ||||| || || | 
Sbjct: 12092655 ggtgctcatgtccttgtccttcttcgggagaggatcgttgtaaggatggcgtggggcacc 12092596

                                                                      
Query: 371      tttagtgacatcgaagtccgtcgcagacgtggaggcggacgtcgaggcgctgct 424
                 || ||||| ||||| |||||||| ||||| || || ||||| |||||||||||
Sbjct: 12092595 cttggtgacgtcgaactccgtcgcggacgtcgacgccgacgtggaggcgctgct 12092542

>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20,
              complete sequence
          Length = 144969

 Score =  127 bits (64), Expect = 3e-26
 Identities = 147/174 (84%), Gaps = 3/174 (1%)
 Strand = Plus / Minus

                                                                          
Query: 251    ctactttggttcgacctttgactggaaggaatatcctccgctgtagtcgtcgagcgagtc 310
              |||||| ||||||| ||| || ||||||||||| |||||||||||||||   | ||||||
Sbjct: 116529 ctacttcggttcgatcttggattggaaggaataccctccgctgtagtcg---aacgagtc 116473

                                                                          
Query: 311    ggtgctcatgcccttgtccttgtttgggagaggatcattgtaagggtggcgaggagcgct 370
              |||||||||| |||||||||| || ||||||||||| |||||||| ||||| || || | 
Sbjct: 116472 ggtgctcatgtccttgtccttcttcgggagaggatcgttgtaaggatggcgtggggcacc 116413

                                                                    
Query: 371    tttagtgacatcgaagtccgtcgcagacgtggaggcggacgtcgaggcgctgct 424
               || ||||| ||||| |||||||| ||||| || || ||||| |||||||||||
Sbjct: 116412 cttggtgacgtcgaactccgtcgcggacgtcgacgccgacgtggaggcgctgct 116359

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 397     acgtggaggcggacgtcgaggcgctgctga 426
               ||||| |||||||||||||| |||||||||
Sbjct: 1506338 acgtgaaggcggacgtcgagccgctgctga 1506367

>ref|XM_637282.1| Dictyostelium discoideum hypothetical protein (DDB0205464), partial
            mRNA
          Length = 2472

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 211  acttgttgaggaggaagaaaa 231
            |||||||||||||||||||||
Sbjct: 2085 acttgttgaggaggaagaaaa 2105

>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
             complete sequence
          Length = 143400

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 204   gcatgctacttgttgaggaggaaga 228
             |||||| ||||||||||||||||||
Sbjct: 49432 gcatgccacttgttgaggaggaaga 49456

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 401      ggaggcggacgtcgaggcgct 421
                |||||||||||||||||||||
Sbjct: 17651282 ggaggcggacgtcgaggcgct 17651262

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 204      gcatgctacttgttgaggaggaaga 228
                |||||| ||||||||||||||||||
Sbjct: 16098262 gcatgccacttgttgaggaggaaga 16098286

>dbj|AP003951.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1288_C01
          Length = 111223

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 401   ggaggcggacgtcgaggcgct 421
             |||||||||||||||||||||
Sbjct: 29180 ggaggcggacgtcgaggcgct 29160

>gb|AC138395.8| Mus musculus chromosome 3, clone RP24-128I24, complete sequence
          Length = 171020

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    atgtaaaatcactctaataa 142
              ||||||||||||||||||||
Sbjct: 150764 atgtaaaatcactctaataa 150783

>gb|AC108813.8| Mus musculus chromosome 1, clone RP23-320P13, complete sequence
          Length = 198759

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   aggatcattgtaagggtggc 360
             ||||||||||||||||||||
Sbjct: 85545 aggatcattgtaagggtggc 85526

>gb|AC140985.3| Mus musculus BAC clone RP23-60H23 from chromosome 13, complete sequence
          Length = 222741

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    aaatcacatagaataacaat 177
              ||||||||||||||||||||
Sbjct: 143575 aaatcacatagaataacaat 143556

>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence
          Length = 357655

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    tcgcagacgtggaggcggac 410
              ||||||||||||||||||||
Sbjct: 274677 tcgcagacgtggaggcggac 274696

>gb|AC159968.3| Mus musculus chromosome 3, clone RP23-256J12, complete sequence
          Length = 153684

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   atgtaaaatcactctaataa 142
             ||||||||||||||||||||
Sbjct: 91147 atgtaaaatcactctaataa 91166

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 402     gaggcggacgtcgaggcgct 421
               ||||||||||||||||||||
Sbjct: 1923353 gaggcggacgtcgaggcgct 1923334

>gb|AC154604.2| Mus musculus BAC clone RP23-348F20 from chromosome 17, complete sequence
          Length = 198374

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    gtgctcatgcccttgtcctt 331
              ||||||||||||||||||||
Sbjct: 141306 gtgctcatgcccttgtcctt 141325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,152,451
Number of Sequences: 3902068
Number of extensions: 3152451
Number of successful extensions: 57947
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57781
Number of HSP's gapped (non-prelim): 163
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)