Clone Name | rbastl20e11 |
---|---|
Clone Library Name | barley_pub |
>FCR1_CANAL (O93870) Fluconazole resistance protein 1| Length = 517 Score = 32.0 bits (71), Expect = 0.45 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +1 Query: 4 DRQRNIALNSLMKDEHHGQAFIRGGWHEPASSTAQDLTNGP-------RHQIAHPTTDRP 162 D RN+ +S + EH G+AFI P +S Q T+ P + ++ P++D Sbjct: 175 DPNRNLKSSSRLFAEHKGEAFI----GSPVTSPQQMPTSNPFRRTSMFKEELESPSSDHY 230 Query: 163 NENYGRQIIAQP 198 NE+ Q + +P Sbjct: 231 NESIFSQSVDEP 242
>HSCC_ECOLI (P77319) Chaperone protein hscC (Hsc62)| Length = 556 Score = 31.6 bits (70), Expect = 0.58 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = -3 Query: 189 YDLSTVVFIWSVCRGVCDLMSRPIREVLGSAACWFMPAASNKRLPVVFIFHQRVQCNVSL 10 YD ST+V + + + C L S I EV+ + C + R V IF ++ N ++ Sbjct: 328 YDPSTIVALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTV 387 Query: 9 SVS 1 VS Sbjct: 388 PVS 390
>TOP1_AERPE (Q9YB01) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 673 Score = 30.4 bits (67), Expect = 1.3 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 56 GRRLFEAAGMNQQAALPKTSRMGRDIKSHTPRQTDQMKTTVDK 184 GRR+ +AG Q L + R R+I H P+ + +K T +K Sbjct: 183 GRRVILSAGRVQSPTLVEAYRRWREINLHVPKASVAVKITAEK 225
>GSPJ_VIBCH (P45776) General secretion pathway protein J precursor (Cholera| toxin secretion protein epsJ) Length = 221 Score = 29.3 bits (64), Expect = 2.9 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 31 SLMKDEHHGQAFIRGGWHEP 90 SL+ + HG F+R GWH P Sbjct: 95 SLLDSDQHGLLFVRLGWHNP 114
>RAB26_RAT (P51156) Ras-related protein Rab-26| Length = 257 Score = 28.9 bits (63), Expect = 3.8 Identities = 15/29 (51%), Positives = 17/29 (58%) Frame = +1 Query: 76 GWHEPASSTAQDLTNGPRHQIAHPTTDRP 162 G PA+ST NGPR +AHP T RP Sbjct: 11 GGSVPAASTLPAAANGPR--LAHPRTARP 37
>ZDH19_HUMAN (Q8WVZ1) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 19) (DHHC-19) Length = 282 Score = 27.7 bits (60), Expect = 8.4 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -1 Query: 80 QPPRINACPWCSSFIREFN 24 +PPR CPWC+ + +F+ Sbjct: 121 RPPRTYHCPWCNICVEDFD 139
>ZDH19_MOUSE (Q810M5) Probable palmitoyltransferase ZDHHC19 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 19) (DHHC-19) Length = 347 Score = 27.7 bits (60), Expect = 8.4 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -1 Query: 80 QPPRINACPWCSSFIREFN 24 +PPR CPWC+ + +F+ Sbjct: 121 RPPRTYHCPWCNICVEDFD 139 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.133 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,862,363 Number of Sequences: 219361 Number of extensions: 606165 Number of successful extensions: 1572 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1553 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1572 length of database: 80,573,946 effective HSP length: 49 effective length of database: 69,825,257 effective search space used: 1675806168 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)