ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl20d09 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 93.2 bits (230), Expect = 2e-19 Identities = 44/60 (73%), Positives = 48/60 (80%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 F +L IE +VV MN DP+LKNR GPAKFPYMLLYPNTSDH G A GLT +GIPNSISI Sbjct: 803 FSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNSISI 862
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 87.0 bits (214), Expect = 2e-17 Identities = 42/60 (70%), Positives = 45/60 (75%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FGA+L IE +VVAMN DP KNR GP FPY LLYPNTSD G A GL+ RGIPNSISI Sbjct: 811 FGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNSISI 870
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 84.0 bits (206), Expect = 1e-16 Identities = 41/60 (68%), Positives = 46/60 (76%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 F +L IE +VV MN D LKNR GPA+FPYMLLYPNTSD TG A G+T +GIPNSISI Sbjct: 807 FSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNSISI 866
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 83.6 bits (205), Expect = 2e-16 Identities = 39/60 (65%), Positives = 46/60 (76%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 F +L IE +V+ MN DP LKNR GPA FPY L++PNTSD+ G AEG+T RGIPNSISI Sbjct: 804 FSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNSISI 863
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 73.9 bits (180), Expect = 2e-13 Identities = 37/61 (60%), Positives = 44/61 (72%), Gaps = 1/61 (1%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQ-AEGLTVRGIPNSIS 256 FG++L IE ++ MN + LKNR GP K PYMLLYPNTSD T + +GLT GIPNSIS Sbjct: 817 FGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPNSIS 876 Query: 255 I 253 I Sbjct: 877 I 877
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 70.1 bits (170), Expect = 2e-12 Identities = 36/60 (60%), Positives = 42/60 (70%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG KLE IEK+++ N D L+NR GPAK PY LLYP++ EGLT RGIPNSISI Sbjct: 800 FGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSE------EGLTFRGIPNSISI 853
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 68.9 bits (167), Expect = 5e-12 Identities = 35/60 (58%), Positives = 41/60 (68%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG+KL GIE ++ A NSDP L+NRTGP + PY LL H EGLT +GIPNSISI Sbjct: 811 FGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL------HRSSEEGLTFKGIPNSISI 864
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 64.3 bits (155), Expect = 1e-10 Identities = 33/60 (55%), Positives = 40/60 (66%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG KL IE+++ N+D L+NR GP K PY LLYP++ EGLT RGIPNSISI Sbjct: 813 FGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSE------EGLTCRGIPNSISI 866
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 64.3 bits (155), Expect = 1e-10 Identities = 32/60 (53%), Positives = 39/60 (65%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG KL+ IE++++ N D L+NR GP K PY +L P D EGLT RGIPNSISI Sbjct: 808 FGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCED-----EGLTFRGIPNSISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 64.3 bits (155), Expect = 1e-10 Identities = 33/60 (55%), Positives = 41/60 (68%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG KL IEK++ N+D +L+NR GP + PY LLYP++ EGLT RGIPNSISI Sbjct: 808 FGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSK------EGLTFRGIPNSISI 861
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 63.2 bits (152), Expect = 3e-10 Identities = 34/61 (55%), Positives = 43/61 (70%), Gaps = 1/61 (1%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLK-NRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSIS 256 FG KL+ IE+++V N+DP L+ NR GP + PY LLYP++ EGLT RGIPNSIS Sbjct: 785 FGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSE------EGLTFRGIPNSIS 838 Query: 255 I 253 I Sbjct: 839 I 839
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 62.4 bits (150), Expect = 5e-10 Identities = 32/60 (53%), Positives = 40/60 (66%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG KL+ IE+++ N+D L NR GP + PY LL+PN +EGLT RGIPNSISI Sbjct: 813 FGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPN-------SEGLTCRGIPNSISI 865
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 60.1 bits (144), Expect = 2e-09 Identities = 31/54 (57%), Positives = 37/54 (68%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGI 271 FG KL IEK++V N+D L+NRTGPAK PY LLYP++ EGLT RGI Sbjct: 694 FGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSE------EGLTFRGI 741
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 59.7 bits (143), Expect = 3e-09 Identities = 31/60 (51%), Positives = 39/60 (65%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG KL IE ++ N+DP L +R GP + PY LL+P++ EGLT RGIPNSISI Sbjct: 811 FGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSK------EGLTFRGIPNSISI 864
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 58.9 bits (141), Expect = 5e-09 Identities = 31/60 (51%), Positives = 39/60 (65%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG KL IE ++ N+D +L+NR GP + PY LL P++ EGLT RGIPNSISI Sbjct: 804 FGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSK------EGLTFRGIPNSISI 857
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 58.5 bits (140), Expect = 7e-09 Identities = 30/60 (50%), Positives = 37/60 (61%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG KL IEKQ++ N D L NR+GP PY LL+P + GLT +GIPNS+SI Sbjct: 808 FGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 861
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 57.8 bits (138), Expect = 1e-08 Identities = 29/60 (48%), Positives = 37/60 (61%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG L IE +++ MNS KNR+GP PY LL+P + EGLT +GIPNS+SI Sbjct: 806 FGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSE------EGLTGKGIPNSVSI 859
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 57.8 bits (138), Expect = 1e-08 Identities = 30/60 (50%), Positives = 38/60 (63%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG K++ IEK + N D LKNRTG K PY LL+P++ G+T RGIPNS+SI Sbjct: 806 FGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG------GVTGRGIPNSVSI 859
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 57.0 bits (136), Expect = 2e-08 Identities = 30/60 (50%), Positives = 37/60 (61%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 FG KL IEKQ++ N + L NRTGP PY LL+P + GLT +GIPNS+SI Sbjct: 807 FGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG------GLTGKGIPNSVSI 860
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 45.1 bits (105), Expect = 7e-05 Identities = 21/60 (35%), Positives = 34/60 (56%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 F A + E+++ N+DP +NR G PY L+ P++ G+T RG+PNS++I Sbjct: 846 FAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSS------GPGITCRGVPNSVTI 899
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 42.7 bits (99), Expect = 4e-04 Identities = 25/60 (41%), Positives = 32/60 (53%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 F A+L+ IE + N D +LKNR G PY L+ P + G+T GIPNS SI Sbjct: 871 FAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------SGVTGMGIPNSTSI 924
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 42.4 bits (98), Expect = 5e-04 Identities = 25/60 (41%), Positives = 33/60 (55%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 F +L+ E + N++P+ KNR G PY LL P + G+T RGIPNSISI Sbjct: 843 FSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSE------PGVTGRGIPNSISI 896
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 42.4 bits (98), Expect = 5e-04 Identities = 24/60 (40%), Positives = 32/60 (53%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 F A + E+ + N+D KNR G PY LL P++ G+T RG+PNSISI Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSS------PPGVTCRGVPNSISI 918
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 41.6 bits (96), Expect = 8e-04 Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 4/57 (7%) Frame = -1 Query: 411 IEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTG----QAEGLTVRGIPNSISI 253 I +QV N+DP KNR G PY+LL P+ D T + + GIPNSISI Sbjct: 880 IVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMGIPNSISI 936
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 41.6 bits (96), Expect = 8e-04 Identities = 25/60 (41%), Positives = 32/60 (53%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 F A+L+ IE + N D +LKNR G PY L+ P + G+T GIPNS SI Sbjct: 888 FTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------AGVTGMGIPNSTSI 941
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 39.7 bits (91), Expect = 0.003 Identities = 24/60 (40%), Positives = 32/60 (53%) Frame = -1 Query: 432 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTVRGIPNSISI 253 F K+ I +QV N D +NR G PY+LL P + + A+ + GIPNSISI Sbjct: 874 FQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP-LNGNPMDAKTVMEMGIPNSISI 932
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 355 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 266 A P H A P L H +G HRQGHPE Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 1.9 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 355 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 266 A P H A P L H +G HRQGHPE Sbjct: 231 APNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>KRA49_HUMAN (Q9BYQ8) Keratin-associated protein 4-9 (Keratin-associated protein| 4.9) (Ultrahigh sulfur keratin-associated protein 4.9) (Fragment) Length = 191 Score = 29.6 bits (65), Expect = 3.2 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%) Frame = +2 Query: 89 ASACRSD---PSCTHPYCLNYSCTGTTLCHTHTQASS 190 +S CR P C P C SC TT CH SS Sbjct: 68 SSCCRPQCCQPVCCQPTCCRPSCCETTCCHPRCCISS 104
>E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related protein E74A)| Length = 873 Score = 29.6 bits (65), Expect = 3.2 Identities = 21/59 (35%), Positives = 30/59 (50%) Frame = +2 Query: 122 HPYCLNYSCTGTTLCHTHTQASSGVSKQG*HKSMRSRRRTCSDQMDMLFGMPLTVSPSA 298 +P+ NY+ T TT + A SGVS S S + C+D++ GMP T + SA Sbjct: 447 NPHHRNYT-TATTGSFPPSPADSGVSDVD---SSSSGGQPCADELKARLGMPTTAATSA 501
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 29.3 bits (64), Expect = 4.2 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = -3 Query: 379 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHIHL 251 P+ PHR +P H P+H PH H Q HP H H+ Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425
>GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 protein)| (E(spl)m9/10) Length = 719 Score = 29.3 bits (64), Expect = 4.2 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +1 Query: 217 KHEVSTTDVLRSDGY--AVRDAPDGEPLGLSRVVGGVWVEQHVWELGRP 357 K+ VS D L+ D Y +V+ PDG L +VGG +W+L P Sbjct: 467 KNPVSQLDCLQRDNYIRSVKLLPDGRTL----IVGGEASNLSIWDLASP 511
>RPM1_CAEEL (Q17551) Ubiquitin ligase protein rpm-1 (EC 6.3.2.-)| (Pam/highwire/rpm-1 protein) (Regulator of presynaptic morphology protein 1) (Synapse defective protein 3) Length = 3766 Score = 29.3 bits (64), Expect = 4.2 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +2 Query: 107 DPSCTHPYCLNYSCTGTTLCHTHTQASSGVSKQ 205 D +CTH C+NY+ T + HT G+ + Sbjct: 3463 DGTCTHEDCVNYAKTACQVMHTCNHFCGGIRNE 3495
>Y735_AGRT5 (Q8UHE7) Hypothetical RNA methyltransferase Atu0735/AGR_C_1331 (EC| 2.1.1.-) Length = 416 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = +2 Query: 59 DALTGSQLS*ASACRSDPSCTH--PYCLNYSCTGTTLCHTHTQASSGVSKQG*HKSMRSR 232 D T ++ ASA R DP C H P +N +C G +L H Q ++ ++RS+ Sbjct: 44 DQGTVMSITEASADRRDPVCRHFGPEGINGTCGGCSLQHLADQPYHAFKRELVVSALRSK 103 Query: 233 RRT 241 T Sbjct: 104 GLT 106
>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 582 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/40 (47%), Positives = 22/40 (55%) Frame = +1 Query: 232 TTDVLRSDGYAVRDAPDGEPLGLSRVVGGVWVEQHVWELG 351 T DVL DG VR +G+SR+V V EQH ELG Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476
>E74EA_DROME (P20105) Ecdysone-induced protein 74EF isoform A (ETS-related| protein E74A) Length = 829 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/59 (35%), Positives = 29/59 (49%) Frame = +2 Query: 122 HPYCLNYSCTGTTLCHTHTQASSGVSKQG*HKSMRSRRRTCSDQMDMLFGMPLTVSPSA 298 +P+ NY+ T TT + A SGVS S S + C+D++ GMP S SA Sbjct: 404 NPHHRNYT-TATTGSFPPSPADSGVSDVD---SSSSGGQPCADELKARLGMPPATSASA 458
>KRA45_HUMAN (Q9BYR2) Keratin-associated protein 4-5 (Keratin-associated protein| 4.5) (Ultrahigh sulfur keratin-associated protein 4.5) Length = 186 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = +2 Query: 89 ASACRSDPSCTHPYCLNYSCTGTTLCHT 172 +S CR P C P C +C TT C T Sbjct: 73 SSCCR--PCCCRPSCCQTTCCRTTCCRT 98
>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related| protein E74B) Length = 883 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/59 (35%), Positives = 29/59 (49%) Frame = +2 Query: 122 HPYCLNYSCTGTTLCHTHTQASSGVSKQG*HKSMRSRRRTCSDQMDMLFGMPLTVSPSA 298 +P+ NY+ T TT + A SGVS S S + C+D++ GMP S SA Sbjct: 458 NPHHRNYT-TATTGSFPPSPADSGVSDVD---SSSSGGQPCADELKARLGMPPATSASA 512 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,599,361 Number of Sequences: 219361 Number of extensions: 1245216 Number of successful extensions: 3533 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3290 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3494 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
