ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl20d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
2dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
3dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.067
4dbj|AK120836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.067
5dbj|AK103664.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.067
6gb|AC110823.5| Mus musculus BAC clone RP24-366C12 from chromosom... 44 0.26
7gb|AC150312.2| Mus musculus BAC clone RP23-336M16 from 7, comple... 44 0.26
8gb|AC148975.3| Mus musculus BAC clone RP23-398E10 from 7, comple... 44 0.26
9gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complet... 42 1.0
10gb|AY862141.1| Lactobacillus johnsonii strain FI9785 plasmid p97... 42 1.0
11emb|AL499609.9| Human DNA sequence from clone RP11-309N23 on chr... 42 1.0
12emb|AL365335.11| Human DNA sequence from clone RP11-278E14 on ch... 42 1.0
13emb|BX950171.9| Zebrafish DNA sequence from clone DKEY-1D1 in li... 42 1.0
14gb|AC093732.3| Homo sapiens BAC clone RP11-15I20 from 2, complet... 42 1.0
15gb|AC092533.1| Homo sapiens BAC clone RP11-57I10 from 2, complet... 42 1.0
16gb|AC164547.4| Mus musculus BAC clone RP24-198D11 from chromosom... 40 4.1
17gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 4.1
18gb|AC159167.4| Callicebus moloch clone LB5-397N12, complete sequ... 40 4.1
19gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, comple... 40 4.1
20gb|AC114006.3| Mus musculus BAC clone RP23-185F9 from 17, comple... 40 4.1
21gb|AC159263.3| Mus musculus BAC clone RP24-66K21 from chromosome... 40 4.1
22gb|AC152551.33| Medicago truncatula clone mth2-24d6, complete se... 40 4.1
23emb|AL139009.14| Human DNA sequence from clone RP5-976H8 on chro... 40 4.1
24emb|AL049710.18|HSJ633H17 Human DNA sequence from clone RP4-633H... 40 4.1
25emb|BX469920.6| Zebrafish DNA sequence from clone DKEY-237J21 in... 40 4.1
26gb|AC109462.2| Homo sapiens chromosome 16 clone RP11-26L20, comp... 40 4.1
27gb|AC154518.2| Mus musculus BAC clone RP23-211K12 from chromosom... 40 4.1
28gb|AC148059.3| Callicebus moloch clone LB5-40A6, complete sequence 40 4.1
29gb|AC009082.7| Homo sapiens chromosome 16 clone RP11-354N7, comp... 40 4.1
30gb|AC160051.2| Mus musculus BAC clone RP24-395P13 from chromosom... 40 4.1
31gb|DQ090940.1| Homo sapiens cadherin 1, type 1, E-cadherin (epit... 40 4.1
32gb|AC148203.3| Callicebus moloch clone LB5-190B16, complete sequ... 40 4.1
33gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chrom... 40 4.1
34gb|AC099314.3| Homo sapiens chromosome 16 clone RP11-354M1, comp... 40 4.1
35gb|AC074087.4| Homo sapiens BAC clone RP11-26C10 from 4, complet... 40 4.1
36gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cance... 40 4.1
37dbj|AP007237.1| Anguilla bicolor pacifica mitochondrial DNA, com... 40 4.1
38dbj|AP007236.1| Anguilla bicolor bicolor mitochondrial DNA, comp... 40 4.1
39emb|BX537140.3| Zebrafish DNA sequence from clone CH211-14N18 in... 40 4.1
40dbj|BS000087.1| Pan troglodytes chromosome 22 clone:RP43-110O22,... 40 4.1
41gb|AC146871.3| Xenopus tropicalis clone CH216-38E19, complete se... 40 4.1
42emb|Z98200.9|HS111B22 Human DNA sequence from clone RP1-111B22 o... 40 4.1
43dbj|AP001687.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.1
44emb|CT025557.11| Mouse DNA sequence from clone RP23-356F21 on ch... 40 4.1
45dbj|AP000459.4| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 4.1
46gb|DP000019.1| Callicebus moloch target 1 genomic scaffold 40 4.1
47gb|AC171003.2| Mus musculus BAC clone RP23-207H9 from chromosome... 40 4.1
48gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome 40 4.1
49emb|AL807748.10| Mouse DNA sequence from clone RP23-170A3 on chr... 40 4.1
50emb|AL772173.16| Mouse DNA sequence from clone RP23-163P22 on ch... 40 4.1 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 288     cacttcagttcatgtacccacggcagt 314
               |||||||||||||||| ||||||||||
Sbjct: 6506696 cacttcagttcatgtatccacggcagt 6506722
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>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489G09
          Length = 148707

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 288   cacttcagttcatgtacccacggcagt 314
             |||||||||||||||| ||||||||||
Sbjct: 74176 cacttcagttcatgtatccacggcagt 74202
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>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0665D10
          Length = 134967

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 288    cacttcagttcatgtacccacggcagt 314
              |||||||||||||||| ||||||||||
Sbjct: 129091 cacttcagttcatgtatccacggcagt 129117
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>dbj|AK120836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020K07, full
            insert sequence
          Length = 3398

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 288  cacttcagttcatgtacccacggcagt 314
            |||||||||||||||| ||||||||||
Sbjct: 3070 cacttcagttcatgtatccacggcagt 3044
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>dbj|AK103664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135J09, full
            insert sequence
          Length = 2751

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 288  cacttcagttcatgtacccacggcagt 314
            |||||||||||||||| ||||||||||
Sbjct: 2411 cacttcagttcatgtatccacggcagt 2385
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>gb|AC110823.5| Mus musculus BAC clone RP24-366C12 from chromosome 7, complete sequence
          Length = 141116

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 142   agcaattatatatgtgactaaa 163
             ||||||||||||||||||||||
Sbjct: 70398 agcaattatatatgtgactaaa 70419
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>gb|AC150312.2| Mus musculus BAC clone RP23-336M16 from 7, complete sequence
          Length = 207429

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 142    agcaattatatatgtgactaaa 163
              ||||||||||||||||||||||
Sbjct: 169016 agcaattatatatgtgactaaa 168995
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>gb|AC148975.3| Mus musculus BAC clone RP23-398E10 from 7, complete sequence
          Length = 209924

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 142  agcaattatatatgtgactaaa 163
            ||||||||||||||||||||||
Sbjct: 2834 agcaattatatatgtgactaaa 2813
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>gb|AC144485.2| Gasterosteus aculeatus clone CH213-101E8, complete sequence
          Length = 203829

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 89    cagttaaactgctttttcttttctc 113
             ||||||| |||||||||||||||||
Sbjct: 43427 cagttaatctgctttttcttttctc 43451
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>gb|AY862141.1| Lactobacillus johnsonii strain FI9785 plasmid p9785S, complete
            sequence
          Length = 3471

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 97   ctgctttttcttttctctagc 117
            |||||||||||||||||||||
Sbjct: 1679 ctgctttttcttttctctagc 1659
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>emb|AL499609.9| Human DNA sequence from clone RP11-309N23 on chromosome 1, complete
              sequence
          Length = 136515

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     attacagcaatgaagaattta 74
              |||||||||||||||||||||
Sbjct: 104148 attacagcaatgaagaattta 104128
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>emb|AL365335.11| Human DNA sequence from clone RP11-278E14 on chromosome 6, complete
              sequence
          Length = 160889

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 160    taaaatacaaagaaaaacaca 180
              |||||||||||||||||||||
Sbjct: 118785 taaaatacaaagaaaaacaca 118765
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>emb|BX950171.9| Zebrafish DNA sequence from clone DKEY-1D1 in linkage group 5, complete
             sequence
          Length = 120091

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   tgactaaaatacaaagaaaaa 176
             |||||||||||||||||||||
Sbjct: 50151 tgactaaaatacaaagaaaaa 50171
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>gb|AC093732.3| Homo sapiens BAC clone RP11-15I20 from 2, complete sequence
          Length = 133209

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   ccttgtgagcaagcacttcag 295
             |||||||||||||||||||||
Sbjct: 88207 ccttgtgagcaagcacttcag 88227
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>gb|AC092533.1| Homo sapiens BAC clone RP11-57I10 from 2, complete sequence
          Length = 121688

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   actaaaatacaaagaaaaaca 178
             |||||||||||||||||||||
Sbjct: 26787 actaaaatacaaagaaaaaca 26807
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>gb|AC164547.4| Mus musculus BAC clone RP24-198D11 from chromosome 13, complete
             sequence
          Length = 177190

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    tttattacagcaatgaagaa 70
             ||||||||||||||||||||
Sbjct: 95144 tttattacagcaatgaagaa 95163
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    aaaatacaaagaaaaacaca 180
              ||||||||||||||||||||
Sbjct: 275436 aaaatacaaagaaaaacaca 275417
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>gb|AC159167.4| Callicebus moloch clone LB5-397N12, complete sequence
          Length = 70993

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    tattacagcaatgaagaatttaca 76
             ||||||| ||||||||||||||||
Sbjct: 43466 tattacaacaatgaagaatttaca 43489
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>gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, complete sequence
          Length = 205515

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 49     aatttattacagcaatgaagaatt 72
              |||||| |||||||||||||||||
Sbjct: 107878 aatttaatacagcaatgaagaatt 107855
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>gb|AC114006.3| Mus musculus BAC clone RP23-185F9 from 17, complete sequence
          Length = 202882

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    aaatacaaagaaaaacacac 181
              ||||||||||||||||||||
Sbjct: 122621 aaatacaaagaaaaacacac 122602
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>gb|AC159263.3| Mus musculus BAC clone RP24-66K21 from chromosome 13, complete sequence
          Length = 223738

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     tttattacagcaatgaagaa 70
              ||||||||||||||||||||
Sbjct: 174145 tttattacagcaatgaagaa 174164
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>gb|AC152551.33| Medicago truncatula clone mth2-24d6, complete sequence
          Length = 115154

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    ttaaactgctttttcttttc 111
             ||||||||||||||||||||
Sbjct: 82980 ttaaactgctttttcttttc 82999
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>emb|AL139009.14| Human DNA sequence from clone RP5-976H8 on chromosome 10p14-15.3,
             complete sequence
          Length = 172657

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   aaaatacaaagaaaaacaca 180
             ||||||||||||||||||||
Sbjct: 12241 aaaatacaaagaaaaacaca 12222
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>emb|AL049710.18|HSJ633H17 Human DNA sequence from clone RP4-633H17 on chromosome 1p31.2-32.2
             Contains a glutamic-oxaloacetic transaminase 2,
             mitochondrial (aspartate aminotransferase 2) (GOT2)
             pseudogene and a cytochrome c oxidase II (MTCO2)
             pseudogene, complete sequence
          Length = 124531

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   aaatacaaagaaaaacacac 181
             ||||||||||||||||||||
Sbjct: 44417 aaatacaaagaaaaacacac 44436
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>emb|BX469920.6| Zebrafish DNA sequence from clone DKEY-237J21 in linkage group 24,
             complete sequence
          Length = 123617

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   ttatatatgtgactaaaata 166
             ||||||||||||||||||||
Sbjct: 73940 ttatatatgtgactaaaata 73959
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>gb|AC109462.2| Homo sapiens chromosome 16 clone RP11-26L20, complete sequence
          Length = 174191

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   aaatacaaagaaaaacacac 181
             ||||||||||||||||||||
Sbjct: 38130 aaatacaaagaaaaacacac 38149
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>gb|AC154518.2| Mus musculus BAC clone RP23-211K12 from chromosome 16, complete
             sequence
          Length = 177189

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    acagcaatgaagaatttaca 76
             ||||||||||||||||||||
Sbjct: 58946 acagcaatgaagaatttaca 58927
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>gb|AC148059.3| Callicebus moloch clone LB5-40A6, complete sequence
          Length = 170861

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 53     tattacagcaatgaagaatttaca 76
              ||||||| ||||||||||||||||
Sbjct: 167349 tattacaacaatgaagaatttaca 167372
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>gb|AC009082.7| Homo sapiens chromosome 16 clone RP11-354N7, complete sequence
          Length = 160277

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   cataagatgatgaaagaatc 229
             ||||||||||||||||||||
Sbjct: 71792 cataagatgatgaaagaatc 71773
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>gb|AC160051.2| Mus musculus BAC clone RP24-395P13 from chromosome 9, complete sequence
          Length = 199433

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 90     agttaaactgctttttcttttctc 113
              ||||||| ||||||||||||||||
Sbjct: 130048 agttaaagtgctttttcttttctc 130071
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>gb|DQ090940.1| Homo sapiens cadherin 1, type 1, E-cadherin (epithelial) (CDH1) gene,
             complete cds
          Length = 100541

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   cataagatgatgaaagaatc 229
             ||||||||||||||||||||
Sbjct: 63289 cataagatgatgaaagaatc 63270
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>gb|AC148203.3| Callicebus moloch clone LB5-190B16, complete sequence
          Length = 187401

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    tattacagcaatgaagaatttaca 76
             ||||||| ||||||||||||||||
Sbjct: 18419 tattacaacaatgaagaatttaca 18442
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>gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chromosome unknown,
             complete sequence
          Length = 196429

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   aaatacaaagaaaaacacac 181
             ||||||||||||||||||||
Sbjct: 86995 aaatacaaagaaaaacacac 86976
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>gb|AC099314.3| Homo sapiens chromosome 16 clone RP11-354M1, complete sequence
          Length = 184945

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    cataagatgatgaaagaatc 229
              ||||||||||||||||||||
Sbjct: 142437 cataagatgatgaaagaatc 142418
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>gb|AC074087.4| Homo sapiens BAC clone RP11-26C10 from 4, complete sequence
          Length = 156083

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    aaatacaaagaaaaacacac 181
              ||||||||||||||||||||
Sbjct: 129809 aaatacaaagaaaaacacac 129790
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>gb|AC112484.8| Homo sapiens 3 BAC RP11-723O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 185470

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   aaatacaaagaaaaacacac 181
             ||||||||||||||||||||
Sbjct: 70831 aaatacaaagaaaaacacac 70850
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>dbj|AP007237.1| Anguilla bicolor pacifica mitochondrial DNA, complete genome
          Length = 16693

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   ctaaaatacaaagaaaaaca 178
             ||||||||||||||||||||
Sbjct: 14054 ctaaaatacaaagaaaaaca 14073
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>dbj|AP007236.1| Anguilla bicolor bicolor mitochondrial DNA, complete genome
          Length = 16700

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   ctaaaatacaaagaaaaaca 178
             ||||||||||||||||||||
Sbjct: 14059 ctaaaatacaaagaaaaaca 14078
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>emb|BX537140.3| Zebrafish DNA sequence from clone CH211-14N18 in linkage group 20,
             complete sequence
          Length = 179077

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   ttatatatgtgactaaaata 166
             ||||||||||||||||||||
Sbjct: 27987 ttatatatgtgactaaaata 28006
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>dbj|BS000087.1| Pan troglodytes chromosome 22 clone:RP43-110O22, map 22, complete
              sequences
          Length = 156630

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 159    ctaaaatacaaagaaaaacacacgctga 186
              ||||| ||||||||||||| ||||||||
Sbjct: 132404 ctaaactacaaagaaaaactcacgctga 132431
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>gb|AC146871.3| Xenopus tropicalis clone CH216-38E19, complete sequence
          Length = 163001

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    aaaatacaaagaaaaacaca 180
              ||||||||||||||||||||
Sbjct: 130748 aaaatacaaagaaaaacaca 130729
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>emb|Z98200.9|HS111B22 Human DNA sequence from clone RP1-111B22 on chromosome 6q16-21 Contains a
              ribosomal protein L3 (RPL3) pseudogenee, the OSTM1 gene for
              osteopetrosis associated transmembrane, the 5' end of a
              novel gene and three CpG islands, complete sequence
          Length = 153382

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    aaatacaaagaaaaacacac 181
              ||||||||||||||||||||
Sbjct: 116779 aaatacaaagaaaaacacac 116760
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>dbj|AP001687.1| Homo sapiens genomic DNA, chromosome 21q, section 31/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 159    ctaaaatacaaagaaaaacacacgctga 186
              ||||| ||||||||||||| ||||||||
Sbjct: 267874 ctaaactacaaagaaaaactcacgctga 267901
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>emb|CT025557.11| Mouse DNA sequence from clone RP23-356F21 on chromosome 13, complete
             sequence
          Length = 186496

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   ccttgtgagcaagcacttca 294
             ||||||||||||||||||||
Sbjct: 15530 ccttgtgagcaagcacttca 15549
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>dbj|AP000459.4| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-42M17, complete
              sequence
          Length = 171863

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 159    ctaaaatacaaagaaaaacacacgctga 186
              ||||| ||||||||||||| ||||||||
Sbjct: 156793 ctaaactacaaagaaaaactcacgctga 156820
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>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold
          Length = 2105003

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 53      tattacagcaatgaagaatttaca 76
               ||||||| ||||||||||||||||
Sbjct: 1904696 tattacaacaatgaagaatttaca 1904719



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 53      tattacagcaatgaagaatttaca 76
               ||||||| ||||||||||||||||
Sbjct: 1347997 tattacaacaatgaagaatttaca 1348020
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>gb|AC171003.2| Mus musculus BAC clone RP23-207H9 from chromosome 13, complete sequence
          Length = 218821

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     tttattacagcaatgaagaa 70
              ||||||||||||||||||||
Sbjct: 154220 tttattacagcaatgaagaa 154201
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>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome
          Length = 1197687

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    ccactgtaattggggttggt 270
              ||||||||||||||||||||
Sbjct: 561335 ccactgtaattggggttggt 561316
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>emb|AL807748.10| Mouse DNA sequence from clone RP23-170A3 on chromosome 4, complete
             sequence
          Length = 170162

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 207   atgcataagatgatgaaagaatct 230
             |||||||||| |||||||||||||
Sbjct: 62881 atgcataagaggatgaaagaatct 62904
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>emb|AL772173.16| Mouse DNA sequence from clone RP23-163P22 on chromosome 2, complete
             sequence
          Length = 203185

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   tttttcttttctctagcctg 120
             ||||||||||||||||||||
Sbjct: 78808 tttttcttttctctagcctg 78789


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,389,896
Number of Sequences: 3902068
Number of extensions: 4389896
Number of successful extensions: 93674
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93489
Number of HSP's gapped (non-prelim): 185
length of query: 314
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 292
effective length of database: 17,147,199,772
effective search space: 5006982333424
effective search space used: 5006982333424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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