>ref|XM_550312.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2808

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  gctttcttgatcgcctgcttgcatttgctgaggaacttactgctgctcgtcgacaccgaa 315
            ||||||||||| || ||||||||  || |||||||||| |||||||| || ||||| |||
Sbjct: 2539 gctttcttgatggcttgcttgcacctggtgaggaacttgctgctgcttgtggacactgaa 2480

                                                                
Query: 316  tcctcatagccgtatctgcgatcgtcgtcgccaaccaccttcggtttcctgc 367
            || |||||||||||||||| || ||||||||| |||||||| || |||||||
Sbjct: 2479 tcttcatagccgtatctgccattgtcgtcgccgaccaccttgggcttcctgc 2428



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 388  ctcattcccaggatcttggaaggagaggatggcagggaccggaaacccct 437
            |||||||| |||||||||||||| ||||| ||||| |||| |||||||||
Sbjct: 2407 ctcattccaaggatcttggaaggtgaggaaggcagagacctgaaacccct 2358

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                           
Query: 256     gctttcttgatcgcctgcttgcatttgctgaggaacttactgctgctcgtcgacaccgaa 315
               ||||||||||| || ||||||||  || |||||||||| |||||||| || ||||| |||
Sbjct: 3938402 gctttcttgatggcttgcttgcacctggtgaggaacttgctgctgcttgtggacactgaa 3938461

                                                                   
Query: 316     tcctcatagccgtatctgcgatcgtcgtcgccaaccaccttcggtttcctgc 367
               || |||||||||||||||| || ||||||||| |||||||| || |||||||
Sbjct: 3938462 tcttcatagccgtatctgccattgtcgtcgccgaccaccttgggcttcctgc 3938513



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                 
Query: 388     ctcattcccaggatcttggaaggagaggatggcagggaccggaaacccct 437
               |||||||| |||||||||||||| ||||| ||||| |||| |||||||||
Sbjct: 3938534 ctcattccaaggatcttggaaggtgaggaaggcagagacctgaaacccct 3938583

>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0013F10
          Length = 163095

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Plus

                                                                         
Query: 256   gctttcttgatcgcctgcttgcatttgctgaggaacttactgctgctcgtcgacaccgaa 315
             ||||||||||| || ||||||||  || |||||||||| |||||||| || ||||| |||
Sbjct: 60306 gctttcttgatggcttgcttgcacctggtgaggaacttgctgctgcttgtggacactgaa 60365

                                                                 
Query: 316   tcctcatagccgtatctgcgatcgtcgtcgccaaccaccttcggtttcctgc 367
             || |||||||||||||||| || ||||||||| |||||||| || |||||||
Sbjct: 60366 tcttcatagccgtatctgccattgtcgtcgccgaccaccttgggcttcctgc 60417



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 388   ctcattcccaggatcttggaaggagaggatggcagggaccggaaacccct 437
             |||||||| |||||||||||||| ||||| ||||| |||| |||||||||
Sbjct: 60438 ctcattccaaggatcttggaaggtgaggaaggcagagacctgaaacccct 60487

>dbj|AK102552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033097C16, full
            insert sequence
          Length = 2807

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  gctttcttgatcgcctgcttgcatttgctgaggaacttactgctgctcgtcgacaccgaa 315
            ||||||||||| || ||||||||  || |||||||||| |||||||| || ||||| |||
Sbjct: 2538 gctttcttgatggcttgcttgcacctggtgaggaacttgctgctgcttgtggacactgaa 2479

                                                                
Query: 316  tcctcatagccgtatctgcgatcgtcgtcgccaaccaccttcggtttcctgc 367
            || |||||||||||||||| || ||||||||| |||||||| || |||||||
Sbjct: 2478 tcttcatagccgtatctgccattgtcgtcgccgaccaccttgggcttcctgc 2427



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 388  ctcattcccaggatcttggaaggagaggatggcagggaccggaaacccct 437
            |||||||| |||||||||||||| ||||| ||||| |||| |||||||||
Sbjct: 2406 ctcattccaaggatcttggaaggtgaggaaggcagagacctgaaacccct 2357

>dbj|AK064369.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-C09, full
            insert sequence
          Length = 1622

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                        
Query: 256  gctttcttgatcgcctgcttgcatttgctgaggaacttactgctgctcgtcgacaccgaa 315
            ||||||||||| || ||||||||  || |||||||||| |||||||| || ||||| |||
Sbjct: 1353 gctttcttgatggcttgcttgcacctggtgaggaacttgctgctgcttgtggacactgaa 1294

                                                                
Query: 316  tcctcatagccgtatctgcgatcgtcgtcgccaaccaccttcggtttcctgc 367
            || |||||||||||||||| || ||||||||| |||||||| || |||||||
Sbjct: 1293 tcttcatagccgtatctgccattgtcgtcgccgaccaccttgggcttcctgc 1242



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 388  ctcattcccaggatcttggaaggagaggatggcagggaccggaaacccct 437
            |||||||| |||||||||||||| ||||| ||||| |||| |||||||||
Sbjct: 1221 ctcattccaaggatcttggaaggtgaggaaggcagagacctgaaacccct 1172

>gb|AY108387.1| Zea mays PCO112108 mRNA sequence
          Length = 636

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                       
Query: 245 atttgtgtaccgctttcttgatcgcctgcttgcatttgctgaggaacttactgctgctcg 304
           |||||| ||| ||||||||||| |||||||||||| |||| ||||||||  |||||||  
Sbjct: 372 atttgtttactgctttcttgattgcctgcttgcatctgctaaggaactttgtgctgcttc 313

                                          
Query: 305 tcgacaccgaatcctcatagccgtatctgcg 335
           | ||||| |||||||||||||| ||| ||||
Sbjct: 312 tggacactgaatcctcatagccatatttgcg 282



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 386 tcctcattcccaggatcttggaaggagaggatggcagggaccggaaacccct 437
           |||||||||||| |||| |||| || || |||||||| ||||||||||||||
Sbjct: 249 tcctcattcccatgatcatggagggtgatgatggcagtgaccggaaacccct 198

>gb|AC010010.6| Drosophila melanogaster 3L BAC RP98-13F6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 167977

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 278   atttgctgaggaacttactgctgc 301
             ||||||||||||||||||||||||
Sbjct: 69071 atttgctgaggaacttactgctgc 69094

>gb|AC093121.1| Drosophila melanogaster 3L BAC RP98-11J11 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 168250

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 278  atttgctgaggaacttactgctgc 301
            ||||||||||||||||||||||||
Sbjct: 2700 atttgctgaggaacttactgctgc 2677

>gb|AE003467.4| Drosophila melanogaster chromosome 3L, section 1 of 83 of the complete
              sequence
          Length = 303512

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 278    atttgctgaggaacttactgctgc 301
              ||||||||||||||||||||||||
Sbjct: 290119 atttgctgaggaacttactgctgc 290142

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 296   tgctgctcgtcgacaccgaatcc 318
             |||||||||||||||||||||||
Sbjct: 94739 tgctgctcgtcgacaccgaatcc 94761

>gb|AC132947.4| Mus musculus BAC clone RP24-372N17 from 8, complete sequence
          Length = 175482

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 186   tcagataaatgtaacaaacaccaca 210
             |||||||||||||||||||| ||||
Sbjct: 79018 tcagataaatgtaacaaacagcaca 78994

>ref|XM_509082.1| PREDICTED: Pan troglodytes similar to keratin 5b (LOC451922), mRNA
          Length = 3309

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 397 aggatcttggaaggagagga 416
           ||||||||||||||||||||
Sbjct: 234 aggatcttggaaggagagga 253

>gb|AC122397.2| Mus musculus BAC clone RP24-90D21 from chromosome 15, complete sequence
          Length = 181742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   agaataaacacagggctgag 236
             ||||||||||||||||||||
Sbjct: 40369 agaataaacacagggctgag 40350

>gb|AY365060.1| Synechococcus sp. PCC 7942 bicarbonate transporter (sbtA) gene,
           partial cds
          Length = 437

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 331 ctgcgatcgtcgtcgccaac 350
           ||||||||||||||||||||
Sbjct: 17  ctgcgatcgtcgtcgccaac 36

>emb|AL390059.10| Human DNA sequence from clone RP11-399E10 on chromosome 4, complete
              sequence
          Length = 200379

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    accacatggaaaagaataaa 224
              ||||||||||||||||||||
Sbjct: 190810 accacatggaaaagaataaa 190829

>emb|AL513342.7| Human DNA sequence from clone RP11-96F14 on chromosome 1 Contains part
             of the FMN2 gene for formin 2, complete sequence
          Length = 127208

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   caaacaccacatggaaaaga 219
             ||||||||||||||||||||
Sbjct: 40367 caaacaccacatggaaaaga 40348

>gb|AC139100.3| Homo sapiens chromosome 18, clone, complete sequence
          Length = 276546

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    ccacatggaaaagaataaac 225
              ||||||||||||||||||||
Sbjct: 111321 ccacatggaaaagaataaac 111340

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 295    ctgctgctcgtcgacaccgaatcc 318
              ||||||| ||||||||||||||||
Sbjct: 822507 ctgctgcgcgtcgacaccgaatcc 822530

>emb|AL672175.7| Mouse DNA sequence from clone RP23-205A9 on chromosome 11 Contains
            the Nog gene for noggin, the 3' end of the gene for a
            novel protein (4932411E22Rik) and one CpG island,
            complete sequence
          Length = 212341

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  ttactcagctacaggaacaa 174
            ||||||||||||||||||||
Sbjct: 9634 ttactcagctacaggaacaa 9615

>gb|AC090360.9| Homo sapiens chromosome 18, clone RP11-795F19, complete sequence
          Length = 177055

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    ccacatggaaaagaataaac 225
              ||||||||||||||||||||
Sbjct: 152864 ccacatggaaaagaataaac 152883

>gb|AC092994.4| Homo sapiens 3 BAC RP11-656A15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 159445

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    accacatggaaaagaataaa 224
              ||||||||||||||||||||
Sbjct: 134602 accacatggaaaagaataaa 134621

>gb|AC068530.16| Homo sapiens chromosome 18, clone RP11-565D23, complete sequence
          Length = 166392

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   ccacatggaaaagaataaac 225
             ||||||||||||||||||||
Sbjct: 15096 ccacatggaaaagaataaac 15115

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 331     ctgcgatcgtcgtcgccaac 350
               ||||||||||||||||||||
Sbjct: 2623730 ctgcgatcgtcgtcgccaac 2623711

>gb|AC021017.4|AC021017 Homo sapiens BAC clone RP11-382E10 from 8, complete sequence
          Length = 182988

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   cctgcacagtctgagcctct 386
             ||||||||||||||||||||
Sbjct: 60319 cctgcacagtctgagcctct 60300

>gb|AC107016.20| Homo sapiens 12 BAC RP11-153F5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 191947

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   aggatcttggaaggagagga 416
             ||||||||||||||||||||
Sbjct: 65430 aggatcttggaaggagagga 65449

>gb|AC107780.12| Mus musculus chromosome 8, clone RP23-61O10, complete sequence
          Length = 244047

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    ccacatggaaaagaataaac 225
              ||||||||||||||||||||
Sbjct: 194349 ccacatggaaaagaataaac 194368

>gb|AC005516.1|AC005516 Homo sapiens Chromosome 4p16.3 BAC clone 399e10 containing Huntington's
              Disease gene; exons 1-67, complete sequence
          Length = 200348

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    accacatggaaaagaataaa 224
              ||||||||||||||||||||
Sbjct: 190779 accacatggaaaagaataaa 190798

>emb|Z68756.1|HSL191F1 Human DNA sequence from clone LA04NC01-191F1 on chromosome 4,
            complete sequence
          Length = 40592

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  accacatggaaaagaataaa 224
            ||||||||||||||||||||
Sbjct: 7939 accacatggaaaagaataaa 7958

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 331     ctgcgatcgtcgtcgccaac 350
               ||||||||||||||||||||
Sbjct: 1526506 ctgcgatcgtcgtcgccaac 1526487


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,212,478
Number of Sequences: 3902068
Number of extensions: 4212478
Number of successful extensions: 86789
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86625
Number of HSP's gapped (non-prelim): 164
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)