>ABDA_DROME (P29555) Homeobox protein abdominal-A|
          Length = 590

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = -3

Query: 234 SDEAGQSTSTLSHWAFGCFEYTHEGMNLSGEWGSFASISDSLQADVPATAFYSELAA**H 55
           + +AG S+ + S  A G     H  +N +    + AS S S  + V A A  +  AA   
Sbjct: 195 NSQAGDSSCSPSPSASGSSSL-HRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSS 253

Query: 54  FAVSSPKCPPFIS 16
           FA+ + K  P++S
Sbjct: 254 FAIPTSKMYPYVS 266

>VE4_HPV54 (Q81022) Probable protein E4|
          Length = 134

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = -1

Query: 215 PRQHCRIGLLAVLNTP 168
           P++HC+  LLA+LNTP
Sbjct: 50  PKRHCQYPLLALLNTP 65

>RES2_SCHPO (P41412) Cell division cycle-related protein res2/pct1|
          Length = 657

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 140 HSPDKFIPSWVYSKQPKAQCDNVDVDCPASSEHWFSQLQLLKM 268
           H  +  IPS++YS  P  Q ++V  D   +S HW   +  ++M
Sbjct: 221 HPEEGRIPSFLYSPPPDFQVNSVIDDDGHTSLHWACSMGHIEM 263

>RL24_NANEQ (P60663) 50S ribosomal protein L24P|
          Length = 140

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 140 HSPDKFIPSWVYSKQPKAQ 196
           ++P  + PSWV SKQP+ Q
Sbjct: 7   YNPSDWSPSWVRSKQPRKQ 25


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,993,086
Number of Sequences: 219361
Number of extensions: 952670
Number of successful extensions: 1776
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1776
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)