>MMP17_HUMAN (Q9ULZ9) Matrix metalloproteinase-17 precursor (EC 3.4.24.-)|
           (MMP-17) (Membrane-type matrix metalloproteinase 4)
           (MT-MMP 4) (Membrane-type-4 matrix metalloproteinase)
           (MT4-MMP)
          Length = 606

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = -2

Query: 378 GEVLWH-LESALQLQQGHPQSTNGD--DCSDSQAQPSDVPIRIKEAE-QSTRPGSHD 220
           G+  W  L+  L++  G+PQST  D   C DSQA  S V   +  AE     PG HD
Sbjct: 498 GQEYWKVLDGELEVAPGYPQSTARDWLVCGDSQADGS-VAAGVDAAEGPRAPPGQHD 553

>DUT_HALSA (Q9HMF3) Probable deoxyuridine 5'-triphosphate nucleotidohydrolase|
           (EC 3.6.1.23) (dUTPase) (dUTP pyrophosphatase)
          Length = 165

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 300 SDSQAQPSDVPIRIKEAEQSTRPGSHDSDGQVV 202
           +D Q QP+ V + +    + T PG  D+DG+ +
Sbjct: 16  ADDQIQPNGVDLTVDAVLEQTEPGRIDTDGKTI 48

>RNFC_HAEIN (P71397) Electron transport complex protein rnfC|
          Length = 819

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +3

Query: 120 LLAGHPPYSFCLKLRKAFCIMAPQS*HQQLAHLNRESLDEWIAR 251
           +L  H P S  +K  K +    P    +   HL  + LD+WI R
Sbjct: 79  MLPVHAPTSGTIKSIKPYVATHPSGLDEPTIHLQADGLDQWIER 122

>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -2

Query: 300  SDSQAQPSDVPIRIKEAEQSTRPGSHDSDGQVVDVKIE 187
            ++ QAQP    I  +EAE+  +P S D +   V+V+ +
Sbjct: 2030 AEGQAQPESEVIESQEAEEEAQPESEDVEALEVEVETQ 2067

>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC|
           2.7.11.1)
          Length = 901

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
 Frame = -2

Query: 399 GVNRPSMGEVLWHLESALQLQQGHPQSTNGDDCSDSQAQPSDVPIRIKEAEQSTRPGSHD 220
           G +RPSM +V   LE AL L  G P       C +    P++V +      + ++  S+ 
Sbjct: 765 GKDRPSMDKVTTALEHALALLMGSP-------CIEQPILPTEVVLGSSRMHKVSQMSSNH 817

Query: 219 --SDGQVVDVKIEVP*YRRP 166
             S+ ++ D + +   YR P
Sbjct: 818 SCSENELADGEDQGIGYRAP 837

>PDR13_ARATH (Q7PC83) Probable pleiotropic drug resistance protein 13|
          Length = 1397

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +3

Query: 6    HKPFFALFLLYCTKRISVYCRDLGIWCYSTTSNMHLSMLL 125
            +K F++L+ ++C+  I  YC   G+   + T N+H+++ L
Sbjct: 1254 YKMFWSLYSIFCSLLIFNYC---GMLMVALTPNIHMALTL 1290

>GRB14_MOUSE (Q9JLM9) Growth factor receptor-bound protein 14 (GRB14 adapter|
           protein)
          Length = 538

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
 Frame = +3

Query: 30  LLYCTKRISVYCRDLGIWCYSTTSNMHLSMLLAGHP------PYSFCLKLRKA 170
           L + TK  S   R L +  +S  S  H+ M LAG        PY FCLK  KA
Sbjct: 261 LYFSTKGTSKEPRHLQL--FSEFSTSHVYMSLAGKKKHGAPTPYGFCLKPNKA 311

>HERC2_HUMAN (O95714) HECT domain and RCC1-like domain-containing protein 2|
          Length = 4834

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = -2

Query: 348  LQLQQGHPQSTNGDDCSDSQA-QPSDV----PIRIKEAEQSTRP 232
            L ++  HP S   +DCS S+A  P  V    P R+K  +QS  P
Sbjct: 2414 LAVESTHPSSPGFEDCSSSEATTPVAVQHIHPARVKRRKQSPVP 2457

>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 330  HPQSTNGDDCSDSQAQPSDVPIRIKEAEQSTRPGSHDSDGQVVDVKIEVP 181
            H +       S+  AQP+        AE    PG+ DSD + VD+ IE P
Sbjct: 2090 HAEGKKSKLTSEEFAQPN--------AEVKKEPGTADSDCRPVDMDIEAP 2131

>PHY1_CERPU (P25848) Light-sensor Protein kinase [Includes: Phytochrome;|
           Protein kinase (EC 2.7.11.1)]
          Length = 1307

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 107 APKHVVSWTPTLFILLETSKGLLYHGTSILTSTTCPSES 223
           AP  +VS TP +  L++     LY+G  +    T P+E+
Sbjct: 420 APIGIVSQTPNIMDLVKCDGAALYYGKRVWLLGTTPTEN 458

>XPC_MOUSE (P51612) DNA-repair protein complementing XP-C cells homolog|
           (Xeroderma pigmentosum group C-complementing protein
           homolog) (p125)
          Length = 930

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
 Frame = -2

Query: 297 DSQAQPSDVPIRIKEAEQSTRPGSHDSDGQVVDVKIEVP*YRRPF------EVSSKMNRV 136
           +S   PSD+P++  E E  T P       +   +K+E   Y R        EV   M++V
Sbjct: 146 NSATSPSDMPVKAVEIEIET-PQQAKERERSEKIKMEFETYLRRMMKRFNKEVQENMHKV 204

Query: 135 GVQLTTCLGACYL*YCNTICRGP 67
            +      G     Y N+ICR P
Sbjct: 205 HLLCLLASGF----YRNSICRQP 223


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,814,998
Number of Sequences: 219361
Number of extensions: 1161695
Number of successful extensions: 2699
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2699
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)