ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl20c04 |
|---|---|
| Clone Library Name | barley_pub |
>LOX1_HORVU (P29114) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 100 bits (250), Expect = 1e-21 Identities = 48/63 (76%), Positives = 52/63 (82%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 FKRF +L IE +VV MN DP+LKNR GPAKFPYMLLYPNTSDH G A GLTA+GIPNS Sbjct: 800 FKRFSDRLVEIESKVVGMNHDPELKNRNGPAKFPYMLLYPNTSDHKGAAAGLTAKGIPNS 859 Query: 264 ISI 256 ISI Sbjct: 860 ISI 862
>LOX2_ORYSA (P29250) Lipoxygenase 2 (EC 1.13.11.12) (Lipoxygenase L-2)| Length = 870 Score = 94.7 bits (234), Expect = 9e-20 Identities = 46/63 (73%), Positives = 49/63 (77%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 FKRFGA+L IE +VVAMN DP KNR GP FPY LLYPNTSD G A GL+ARGIPNS Sbjct: 808 FKRFGARLTEIESRVVAMNKDPHRKNRVGPTNFPYTLLYPNTSDLKGDAAGLSARGIPNS 867 Query: 264 ISI 256 ISI Sbjct: 868 ISI 870
>LOX1_ORYSA (Q76I22) Lipoxygenase 1 (EC 1.13.11.12) (9-lipoxygenase) (r9-LOX1)| Length = 863 Score = 91.3 bits (225), Expect = 1e-18 Identities = 43/63 (68%), Positives = 50/63 (79%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 FKRF +L IE +V+ MN DP LKNR GPA FPY L++PNTSD+ G AEG+TARGIPNS Sbjct: 801 FKRFSRQLVEIESKVLNMNKDPLLKNRVGPANFPYTLMFPNTSDNKGAAEGITARGIPNS 860 Query: 264 ISI 256 ISI Sbjct: 861 ISI 863
>LOX3_ORYSA (Q7G794) Putative lipoxygenase 3 (EC 1.13.11.12)| Length = 866 Score = 90.5 bits (223), Expect = 2e-18 Identities = 44/63 (69%), Positives = 50/63 (79%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F+RF +L IE +VV MN D LKNR GPA+FPYMLLYPNTSD TG A G+TA+GIPNS Sbjct: 804 FRRFSDRLVEIEGKVVGMNGDAGLKNRNGPAEFPYMLLYPNTSDVTGAAAGITAKGIPNS 863 Query: 264 ISI 256 ISI Sbjct: 864 ISI 866
>LOX4_ORYSA (Q53RB0) Probable lipoxygenase 4 (EC 1.13.11.12)| Length = 877 Score = 81.6 bits (200), Expect = 8e-16 Identities = 41/64 (64%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQ-AEGLTARGIPN 268 FKRFG++L IE ++ MN + LKNR GP K PYMLLYPNTSD T + +GLTA GIPN Sbjct: 814 FKRFGSRLVDIENRIKDMNGNSALKNRNGPVKMPYMLLYPNTSDVTKEKGQGLTAMGIPN 873 Query: 267 SISI 256 SISI Sbjct: 874 SISI 877
>LOX4_SOYBN (P38417) Lipoxygenase-4 (EC 1.13.11.12) (L-4) (VSP94)| Length = 853 Score = 75.9 bits (185), Expect = 4e-14 Identities = 39/63 (61%), Positives = 45/63 (71%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 FKRFG KLE IEK+++ N D L+NR GPAK PY LLYP++ EGLT RGIPNS Sbjct: 797 FKRFGKKLEEIEKKLIEKNKDETLRNRYGPAKMPYTLLYPSSE------EGLTFRGIPNS 850 Query: 264 ISI 256 ISI Sbjct: 851 ISI 853
>LOXX_SOYBN (P24095) Seed lipoxygenase (EC 1.13.11.12)| Length = 864 Score = 74.7 bits (182), Expect = 9e-14 Identities = 38/63 (60%), Positives = 44/63 (69%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 FKRFG+KL GIE ++ A NSDP L+NRTGP + PY LL H EGLT +GIPNS Sbjct: 808 FKRFGSKLTGIEGKINARNSDPSLRNRTGPVQLPYTLL------HRSSEEGLTFKGIPNS 861 Query: 264 ISI 256 ISI Sbjct: 862 ISI 864
>LOX1_LENCU (P38414) Lipoxygenase (EC 1.13.11.12)| Length = 866 Score = 70.9 bits (172), Expect = 1e-12 Identities = 36/63 (57%), Positives = 43/63 (68%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 FKRFG KL IE+++ N+D L+NR GP K PY LLYP++ EGLT RGIPNS Sbjct: 810 FKRFGKKLAEIEEKLTQRNNDESLRNRYGPVKMPYTLLYPSSE------EGLTCRGIPNS 863 Query: 264 ISI 256 ISI Sbjct: 864 ISI 866
>LOXA_PHAVU (P27480) Lipoxygenase 1 (EC 1.13.11.12)| Length = 862 Score = 70.1 bits (170), Expect = 2e-12 Identities = 35/63 (55%), Positives = 42/63 (66%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 FKRFG KL+ IE++++ N D L+NR GP K PY +L P D EGLT RGIPNS Sbjct: 805 FKRFGQKLKEIEEKIMGRNKDSSLRNRNGPVKMPYTVLLPTCED-----EGLTFRGIPNS 859 Query: 264 ISI 256 ISI Sbjct: 860 ISI 862
>LOX3_PEA (P09918) Seed lipoxygenase-3 (EC 1.13.11.12)| Length = 861 Score = 68.9 bits (167), Expect = 5e-12 Identities = 35/63 (55%), Positives = 44/63 (69%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 FK+FG KL IEK++ N+D +L+NR GP + PY LLYP++ EGLT RGIPNS Sbjct: 805 FKKFGNKLAEIEKKLTQRNNDEKLRNRHGPVEMPYTLLYPSSK------EGLTFRGIPNS 858 Query: 264 ISI 256 ISI Sbjct: 859 ISI 861
>LOX2_SOYBN (P09439) Seed lipoxygenase-2 (EC 1.13.11.12) (L-2)| Length = 865 Score = 66.2 bits (160), Expect = 3e-11 Identities = 33/63 (52%), Positives = 43/63 (68%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F++FG KL+ IE+++ N+D L NR GP + PY LL+PN +EGLT RGIPNS Sbjct: 810 FQKFGNKLKEIEEKLARKNNDQSLSNRLGPVQLPYTLLHPN-------SEGLTCRGIPNS 862 Query: 264 ISI 256 ISI Sbjct: 863 ISI 865
>LOX1_SOYBN (P08170) Seed lipoxygenase-1 (EC 1.13.11.12) (L-1)| Length = 839 Score = 66.2 bits (160), Expect = 3e-11 Identities = 35/64 (54%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLK-NRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPN 268 F++FG KL+ IE+++V N+DP L+ NR GP + PY LLYP++ EGLT RGIPN Sbjct: 782 FQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYPSSE------EGLTFRGIPN 835 Query: 267 SISI 256 SISI Sbjct: 836 SISI 839
>LOXB_PHAVU (P27481) Lipoxygenase (EC 1.13.11.12) (Fragment)| Length = 741 Score = 65.9 bits (159), Expect = 4e-11 Identities = 34/57 (59%), Positives = 40/57 (70%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGI 274 FKRFG KL IEK++V N+D L+NRTGPAK PY LLYP++ EGLT RGI Sbjct: 691 FKRFGKKLAEIEKKLVQKNNDETLRNRTGPAKMPYTLLYPSSE------EGLTFRGI 741
>LOX3_SOYBN (P09186) Seed lipoxygenase-3 (EC 1.13.11.12) (L-3)| Length = 857 Score = 64.7 bits (156), Expect = 1e-10 Identities = 34/63 (53%), Positives = 42/63 (66%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 FKRFG KL IE ++ N+D +L+NR GP + PY LL P++ EGLT RGIPNS Sbjct: 801 FKRFGNKLAQIENKLSERNNDEKLRNRCGPVQMPYTLLLPSSK------EGLTFRGIPNS 854 Query: 264 ISI 256 ISI Sbjct: 855 ISI 857
>LOXB_LYCES (P38416) Lipoxygenase B (EC 1.13.11.12)| Length = 859 Score = 63.5 bits (153), Expect = 2e-10 Identities = 31/63 (49%), Positives = 40/63 (63%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F+RFG L IE +++ MNS KNR+GP PY LL+P + EGLT +GIPNS Sbjct: 803 FERFGKMLSDIENRIMIMNSHKSWKNRSGPVNVPYTLLFPTSE------EGLTGKGIPNS 856 Query: 264 ISI 256 +SI Sbjct: 857 VSI 859
>LOX1_SOLTU (P37831) Lipoxygenase 1 (EC 1.13.11.12)| Length = 861 Score = 63.5 bits (153), Expect = 2e-10 Identities = 32/63 (50%), Positives = 39/63 (61%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F RFG KL IEKQ++ N D L NR+GP PY LL+P + GLT +GIPNS Sbjct: 805 FDRFGKKLTDIEKQIIQRNGDNILTNRSGPVNAPYTLLFPTSEG------GLTGKGIPNS 858 Query: 264 ISI 256 +SI Sbjct: 859 VSI 861
>LOX2_PEA (P14856) Seed lipoxygenase-2 (EC 1.13.11.12)| Length = 864 Score = 62.8 bits (151), Expect = 4e-10 Identities = 32/63 (50%), Positives = 42/63 (66%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F++FG KL IE ++ N+DP L +R GP + PY LL+P++ EGLT RGIPNS Sbjct: 808 FQKFGNKLAEIEAKLTNKNNDPSLYHRVGPVQLPYTLLHPSSK------EGLTFRGIPNS 861 Query: 264 ISI 256 ISI Sbjct: 862 ISI 864
>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)| Length = 860 Score = 62.8 bits (151), Expect = 4e-10 Identities = 32/63 (50%), Positives = 40/63 (63%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F+RFG KL IEKQ++ N + L NRTGP PY LL+P + GLT +GIPNS Sbjct: 804 FERFGNKLTDIEKQIMQRNGNNILTNRTGPVNAPYTLLFPTSEG------GLTGKGIPNS 857 Query: 264 ISI 256 +SI Sbjct: 858 VSI 860
>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)| Length = 859 Score = 62.4 bits (150), Expect = 5e-10 Identities = 31/63 (49%), Positives = 41/63 (65%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F++FG K++ IEK + N D LKNRTG K PY LL+P++ G+T RGIPNS Sbjct: 803 FEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEG------GVTGRGIPNS 856 Query: 264 ISI 256 +SI Sbjct: 857 VSI 859
>LOX23_HORVU (Q8GSM2) Lipoxygenase 2.3, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:3) Length = 896 Score = 47.0 bits (110), Expect = 2e-05 Identities = 26/63 (41%), Positives = 36/63 (57%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F++F +L+ E + N++P+ KNR G PY LL P + G+T RGIPNS Sbjct: 840 FEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSE------PGVTGRGIPNS 893 Query: 264 ISI 256 ISI Sbjct: 894 ISI 896
>LOX5_ORYSA (Q7XV13) Putative lipoxygenase 5 (EC 1.13.11.12)| Length = 899 Score = 46.2 bits (108), Expect = 4e-05 Identities = 21/62 (33%), Positives = 35/62 (56%) Frame = -1 Query: 441 KRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSI 262 + F A + E+++ N+DP +NR G PY L+ P++ G+T RG+PNS+ Sbjct: 844 REFAADVRRAEEEIERRNADPSRRNRCGAGVLPYELMAPSS------GPGITCRGVPNSV 897 Query: 261 SI 256 +I Sbjct: 898 TI 899
>LOX21_HORVU (P93184) Lipoxygenase 2.1, chloroplast precursor (EC 1.13.11.12)| (LOX-100) (LOX2:Hv:1) Length = 936 Score = 44.7 bits (104), Expect = 1e-04 Identities = 27/67 (40%), Positives = 34/67 (50%), Gaps = 4/67 (5%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTG----QAEGLTARG 277 F+ F I +QV N+DP KNR G PY+LL P+ D T + + G Sbjct: 870 FEEFKESTRKIVEQVDEWNNDPDRKNRHGAGMVPYVLLRPSDGDPTDGDPTDEKMVMEMG 929 Query: 276 IPNSISI 256 IPNSISI Sbjct: 930 IPNSISI 936
>LOXC1_ORYSA (P38419) Lipoxygenase 7, chloroplast precursor (EC 1.13.11.12)| Length = 924 Score = 43.9 bits (102), Expect = 2e-04 Identities = 25/60 (41%), Positives = 32/60 (53%) Frame = -1 Query: 435 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256 F A+L+ IE + N D +LKNR G PY L+ P + G+T GIPNS SI Sbjct: 871 FAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------SGVTGMGIPNSTSI 924
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 42.7 bits (99), Expect = 4e-04 Identities = 25/60 (41%), Positives = 32/60 (53%) Frame = -1 Query: 435 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256 F A+L+ IE + N D +LKNR G PY L+ P + G+T GIPNS SI Sbjct: 888 FTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSD------AGVTGMGIPNSTSI 941
>LOX6_ORYSA (Q8H016) Probable lipoxygenase 6 (EC 1.13.11.12)| Length = 918 Score = 42.7 bits (99), Expect = 4e-04 Identities = 24/60 (40%), Positives = 32/60 (53%) Frame = -1 Query: 435 FGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNSISI 256 F A + E+ + N+D KNR G PY LL P++ G+T RG+PNSISI Sbjct: 865 FAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSS------PPGVTCRGVPNSISI 918
>LOXC_ARATH (P38418) Lipoxygenase, chloroplast precursor (EC 1.13.11.12)| Length = 896 Score = 42.0 bits (97), Expect = 7e-04 Identities = 27/63 (42%), Positives = 35/63 (55%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F+RF KL+ +E + N + LKNR G Y LL P TS+H G+T G+P S Sbjct: 840 FERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKP-TSEH-----GVTGMGVPYS 893 Query: 264 ISI 256 ISI Sbjct: 894 ISI 896
>LOX22_HORVU (Q8GSM3) Lipoxygenase 2.2, chloroplast precursor (EC 1.13.11.12)| (LOX2:Hv:2) Length = 932 Score = 41.6 bits (96), Expect = 9e-04 Identities = 25/63 (39%), Positives = 34/63 (53%) Frame = -1 Query: 444 FKRFGAKLEGIEKQVVAMNSDPQLKNRTGPAKFPYMLLYPNTSDHTGQAEGLTARGIPNS 265 F+ F K+ I +QV N D +NR G PY+LL P + + A+ + GIPNS Sbjct: 871 FQVFQKKMRDIAEQVEEWNKDDSRRNRHGAGVVPYVLLRP-LNGNPMDAKTVMEMGIPNS 929 Query: 264 ISI 256 ISI Sbjct: 930 ISI 932
>SYP_MYCTU (O05814) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 582 Score = 31.2 bits (69), Expect = 1.2 Identities = 20/40 (50%), Positives = 23/40 (57%) Frame = +1 Query: 235 TTDVLRSDGYAVRDAPGGEPLGLSRVVGGVWVEQHVWELG 354 T DVL DG VR G +G+SR+V V EQH ELG Sbjct: 438 TADVLGEDGKPVRLTMGSYGIGVSRLV-AVVAEQHHDELG 476
>SEPP1_PONPY (Q5R8W9) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 358 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 269 A P H A P L H +G HRQGHPE Sbjct: 231 APDAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>SEPP1_HUMAN (P49908) Selenoprotein P precursor (SeP)| Length = 381 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/30 (50%), Positives = 16/30 (53%) Frame = -3 Query: 358 AGQVPIHAALPKHLRPHGTGRGAHRQGHPE 269 A P H A P L H +G HRQGHPE Sbjct: 231 APNAPTHPA-PPGLHHHHKHKGQHRQGHPE 259
>PYRK_METKA (P58887) Probable dihydroorotate dehydrogenase electron transfer| subunit Length = 262 Score = 29.6 bits (65), Expect = 3.5 Identities = 22/80 (27%), Positives = 31/80 (38%) Frame = -2 Query: 272 RTAYPSDLSTSVVETSCFWAILACLHRS*LVCVCVTESCADXXXXXXXXXXXXXX*SACG 93 R +P+D+ +VE C + AC LV V D CG Sbjct: 164 RKGFPTDVLEELVEKECPDVVYACGPEGMLVRVAEIAREHDVPCQVSVVRYVKCGEGICG 223 Query: 92 SSAQLATGQCIVVCRKNPLF 33 S A G+ ++VCR P+F Sbjct: 224 S---CALGKGLLVCRDGPVF 240
>UD12_MOUSE (P70691) UDP-glucuronosyltransferase 1-2 precursor (EC 2.4.1.17)| (UDPGT) (UGT1*0) (UGT1-02) (UGT1.2) (UGT1A2) (Bilirubin specific) Length = 533 Score = 29.6 bits (65), Expect = 3.5 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +2 Query: 362 VRFLSCGSEFMATTCFSMPSSFAPNRL 442 +R LSCG E+ AT C PSS+ PN L Sbjct: 172 LRSLSCGIEYEATQC-PNPSSYIPNLL 197
>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3| Length = 623 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 4/47 (8%) Frame = -3 Query: 382 PAAQEPHRAGQVPIHAALPKHLRPHGTGRG----AHRQGHPEQHIHL 254 P+ PHR +P H P+H PH H Q HP H H+ Sbjct: 380 PSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQ-HPPPHQHI 425
>KRA49_HUMAN (Q9BYQ8) Keratin-associated protein 4-9 (Keratin-associated protein| 4.9) (Ultrahigh sulfur keratin-associated protein 4.9) (Fragment) Length = 191 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 3/30 (10%) Frame = +3 Query: 90 ASACRSD---PSCTHPYCLNYSCIGTTLCH 170 +S CR P C P C SC TT CH Sbjct: 68 SSCCRPQCCQPVCCQPTCCRPSCCETTCCH 97
>CRIM1_BRARE (Q7T3Q2) Cysteine-rich motor neuron 1 protein precursor (CRIM-1)| Length = 1027 Score = 28.5 bits (62), Expect = 7.7 Identities = 21/65 (32%), Positives = 23/65 (35%) Frame = +3 Query: 114 SCTHPYCLNYSCIGTTLCHTHTHKLAPV*ASKDSPKA*GLDDGRAQIRWICCSGCPWR*A 293 SCTH YCL G TLC T + P + CC CP A Sbjct: 829 SCTHCYCLQ----GQTLCSTVSCPALPC-------------HQPLTVEGSCCPMCPESYA 871 Query: 294 PRPVP 308 P VP Sbjct: 872 PTNVP 876 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,103,881 Number of Sequences: 219361 Number of extensions: 1435267 Number of successful extensions: 3988 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 3739 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3946 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
