Clone Name | rbastl20c02 |
---|---|
Clone Library Name | barley_pub |
>URE23_PSEU2 (Q4ZUD1) Urease gamma/beta subunit (EC 3.5.1.5) (Urea| amidohydrolase gamma/beta subunit) Length = 231 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -3 Query: 332 SPLLGETSLQGARDGRLSAELVGVG 258 S L+ + L+GAR+GR AEL+G G Sbjct: 36 SALIADEILEGAREGRSVAELIGFG 60
>URE23_PSESM (Q883F3) Urease gamma/beta subunit (EC 3.5.1.5) (Urea| amidohydrolase gamma/beta subunit) Length = 231 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = -3 Query: 332 SPLLGETSLQGARDGRLSAELVGVG 258 S L+ + L+GAR+GR AEL+G G Sbjct: 36 SALIADEILEGAREGRSVAELIGFG 60
>SIMA_DROME (Q24167) Protein similar| Length = 1507 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 20 KHKMRFAIVHTPKATHDSCQNDFSSNPSSSMV 115 K K A+V A+ SC + FSS+P SS V Sbjct: 14 KQKQSQAVVTNTSASSSSCSSSFSSSPPSSSV 45
>GRPE_STRCO (Q05562) Protein grpE (HSP-70 cofactor)| Length = 225 Score = 28.1 bits (61), Expect = 5.4 Identities = 12/33 (36%), Positives = 22/33 (66%) Frame = +3 Query: 225 LPLVSKLGTERTDTDQLGGQTTISSSLETSLAK 323 LP++ +G R + +GG +++ SLET++AK Sbjct: 97 LPVLDDVGRAREHGELVGGFKSVAESLETTVAK 129
>ALG10_NEUCR (Q7SA35) Alpha-1,2 glucosyltransferase alg-10 (EC 2.4.1.-)| (Alpha-2-glucosyltransferase ALG10) (Dolichyl-phosphoglucose-dependent glucosyltransferase ALG10) (Asparagine-linked glycosylation protein 10) Length = 770 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +1 Query: 259 PTPTNSADRRPSLAPWRLVSPSSGDQSNKI*KEQKRS 369 PTP+++ + P + WR PS + + K +RS Sbjct: 392 PTPSHTTTKDPGRSSWRFTKPSITSKKSSTTKPPQRS 428
>URE3_PSEPK (Q88J06) Urease gamma subunit (EC 3.5.1.5) (Urea amidohydrolase| gamma subunit) Length = 100 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -3 Query: 326 LLGETSLQGARDGRLSAELVGVG 258 L+ L+GARDGR AEL+ +G Sbjct: 38 LISAAVLEGARDGRTVAELMSLG 60
>ESAM_MACFA (Q95KI3) Endothelial cell-selective adhesion molecule precursor| Length = 390 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 97 IRGKIILA*VVSSLGGVYNCKPH 29 IRG + L + SS+ GVY CK H Sbjct: 205 IRGSLSLTNLSSSMAGVYVCKAH 227
>ESAM_HUMAN (Q96AP7) Endothelial cell-selective adhesion molecule precursor| Length = 390 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 97 IRGKIILA*VVSSLGGVYNCKPH 29 IRG + L + SS+ GVY CK H Sbjct: 205 IRGSLSLTNLSSSMAGVYVCKAH 227 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,522,302 Number of Sequences: 219361 Number of extensions: 711654 Number of successful extensions: 1923 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1904 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1923 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 1396778976 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)