ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbastl20c02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009111.1| Triticum aestivum clone wl1.pk0008.b3:fis, full insert mRNA sequence Length = 1632 Score = 69.9 bits (35), Expect = 6e-09 Identities = 51/55 (92%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 303 ttggagactagtctcgccaagcagcggagatcaatccaataaaatttaaaaagaa 357 |||||||||| |||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 1615 ttggagactaacctcgccaagcagcgga-atcaatccaataaaatttaaagagaa 1562
>gb|BT009623.1| Triticum aestivum clone wre1n.pk0143.e2:fis, full insert mRNA sequence Length = 982 Score = 61.9 bits (31), Expect = 1e-06 Identities = 41/43 (95%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 315 ctcgccaagcagcggagatcaatccaataaaatttaaaaagaa 357 |||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 961 ctcgccaagcagcgga-atcaatccaataaaatttaaagagaa 920
>gb|AC004168.2|AC004168 Homo sapiens chromosome 4 clone B159L21 map 4q25, complete sequence Length = 185566 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaagaag 368 |||||||||||||||||| |||||||||| Sbjct: 4981 aataaaatttaaaaagaaaaaaaaagaag 5009
>gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, complete sequence Length = 214765 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 |||||||||||||||||| ||||||||| Sbjct: 207704 aataaaatttaaaaagaaaaaaaaagaa 207677
>gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, complete sequence Length = 139884 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 |||||||||||||||||| ||||||||| Sbjct: 119553 aataaaatttaaaaagaaaaaaaaagaa 119526
>gb|AC109633.5| Homo sapiens chromosome 8, clone CTD-2024D23, complete sequence Length = 134242 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 ||||||||||||||| |||||||||||| Sbjct: 20811 aataaaatttaaaaaaaacaaaaaagaa 20838
>gb|AC011443.6|AC011443 Homo sapiens chromosome 19 clone CTC-218B8, complete sequence Length = 156776 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 341 ataaaatttaaaaagaacaaaaaagaag 368 ||||||||||||||||| |||||||||| Sbjct: 28035 ataaaatttaaaaagaaaaaaaaagaag 28008
>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence Length = 129237 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 |||||||||||||||||| ||||||||| Sbjct: 69729 aataaaatttaaaaagaaaaaaaaagaa 69756
>gb|BC086793.1| Mus musculus RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:102153 IMAGE:6414012), complete cds Length = 2085 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 338 ccaataaaatttaaaaagaacaaaaaa 364 |||||||||||||| |||||||||||| Sbjct: 2047 ccaataaaatttaacaagaacaaaaaa 2073
>gb|BC072470.1| Rattus norvegicus RAB7, member RAS oncogene family, mRNA (cDNA clone MGC:91396 IMAGE:7098657), complete cds Length = 2107 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 338 ccaataaaatttaaaaagaacaaaaaa 364 |||||||||||||| |||||||||||| Sbjct: 2065 ccaataaaatttaacaagaacaaaaaa 2091
>emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chromosome X Contains part of the PCDH11X gene for protocadherin 11 X-linked, complete sequence Length = 170805 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 201 ttcatgctaaaaaaggaaaaggg 223 ||||||||||||||||||||||| Sbjct: 149777 ttcatgctaaaaaaggaaaaggg 149755
>ref|NM_023950.3| Rattus norvegicus RAB7, member RAS oncogene family (Rab7), mRNA Length = 2107 Score = 46.1 bits (23), Expect = 0.083 Identities = 26/27 (96%) Strand = Plus / Plus Query: 338 ccaataaaatttaaaaagaacaaaaaa 364 |||||||||||||| |||||||||||| Sbjct: 2065 ccaataaaatttaacaagaacaaaaaa 2091
>gb|AC012067.2|AC012067 Homo sapiens BAC clone RP11-192N14 from Y, complete sequence Length = 164507 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Minus Query: 201 ttcatgctaaaaaaggaaaaggg 223 ||||||||||||||||||||||| Sbjct: 95672 ttcatgctaaaaaaggaaaaggg 95650
>gb|AC004072.1|AC004072 Human Chromosome X clone bWXD342, complete sequence Length = 170658 Score = 46.1 bits (23), Expect = 0.083 Identities = 23/23 (100%) Strand = Plus / Plus Query: 201 ttcatgctaaaaaaggaaaaggg 223 ||||||||||||||||||||||| Sbjct: 58223 ttcatgctaaaaaaggaaaaggg 58245
>gb|AC108852.9| Mus musculus chromosome 3, clone RP24-87H3, complete sequence Length = 220174 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaagaagt 369 |||||| ||||||||||| ||||||||||| Sbjct: 213705 aataaattttaaaaagaaaaaaaaagaagt 213734
>gb|AC142268.4| Mus musculus BAC clone RP24-156E13 from chromosome 8, complete sequence Length = 145999 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaaaa 364 |||||||||||||||||||||| Sbjct: 75091 aaaatttaaaaagaacaaaaaa 75070
>ref|XM_791991.1| PREDICTED: Strongylocentrotus purpuratus similar to Ecdysone-induced protein 75B isoform C (E75-C) (LOC592471), mRNA Length = 677 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 166 ctgggccatcatcatcatcttc 187 |||||||||||||||||||||| Sbjct: 221 ctgggccatcatcatcatcttc 242
>gb|AC090013.16| Homo sapiens 12 BAC RP11-407P2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85446 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 174 tcatcatcatcttcccccttcccctc 199 ||||||||||||||||||| |||||| Sbjct: 15600 tcatcatcatcttccccctgcccctc 15575
>gb|AF351270.1| Gossypium hirsutum clone JESPR28 microsatellite sequence Length = 255 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 172 catcatcatcatcttccccctt 193 |||||||||||||||||||||| Sbjct: 105 catcatcatcatcttccccctt 126
>gb|AC131664.3| Mus musculus BAC clone RP23-274J16 from chromosome 5, complete sequence Length = 189996 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ttcctctaatccttcttcttcc 109 |||||||||||||||||||||| Sbjct: 20676 ttcctctaatccttcttcttcc 20655
>gb|AC123660.8| Mus musculus chromosome 3, clone RP23-196E24, complete sequence Length = 211632 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaagt 369 |||||| ||||||||||| ||||||||||| Sbjct: 138662 aataaattttaaaaagaaaaaaaaagaagt 138633
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 taaaaagaacaaaaaagaagtc 370 |||||||||||||||||||||| Sbjct: 2170484 taaaaagaacaaaaaagaagtc 2170505
>dbj|AP005585.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0448B11 Length = 179858 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 taaaaagaacaaaaaagaagtc 370 |||||||||||||||||||||| Sbjct: 32322 taaaaagaacaaaaaagaagtc 32343
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 taaaaagaacaaaaaagaagtc 370 |||||||||||||||||||||| Sbjct: 95901 taaaaagaacaaaaaagaagtc 95922
>gb|AC107780.12| Mus musculus chromosome 8, clone RP23-61O10, complete sequence Length = 244047 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 347 tttaaaaagaacaaaaaagaag 368 |||||||||||||||||||||| Sbjct: 153321 tttaaaaagaacaaaaaagaag 153300
>dbj|AP002958.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-16H7, complete sequence Length = 72000 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaaaa 364 |||||||||||||||||||||| Sbjct: 30102 aaaatttaaaaagaacaaaaaa 30081
>emb|CT010508.10| Mouse DNA sequence from clone RP23-250G8 on chromosome 9, complete sequence Length = 223547 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaa 361 |||||||||||||||||||||| Sbjct: 188728 aataaaatttaaaaagaacaaa 188707
>gb|AC133584.12| Mus musculus chromosome 5, clone RP24-448L9, complete sequence Length = 165291 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 ttcctctaatccttcttcttcc 109 |||||||||||||||||||||| Sbjct: 11514 ttcctctaatccttcttcttcc 11535
>emb|AL772354.6| Mouse DNA sequence from clone RP23-54P14 on chromosome 4, complete sequence Length = 182737 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaa 361 |||||||||||||||||||||| Sbjct: 109484 aataaaatttaaaaagaacaaa 109463
>gb|AF285158.1| Homo sapiens topoisomerase II alpha-3 (TOP2A) mRNA, partial cds Length = 1608 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 aaatttaaaaagaacaaaaaa 364 ||||||||||||||||||||| Sbjct: 1035 aaatttaaaaagaacaaaaaa 1015
>gb|AC161229.10| Mus musculus chromosome 7, clone RP24-88J19, complete sequence Length = 189105 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaa 364 |||||||||||||||||| |||||| Sbjct: 168373 aataaaatttaaaaagaaaaaaaaa 168349
>gb|AC107684.7| Mus musculus chromosome 5, clone RP24-389O5, complete sequence Length = 121239 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaaaagaa 367 |||| |||||||||||||||||||| Sbjct: 10435 aaaaattaaaaagaacaaaaaagaa 10411
>gb|AC150517.3| Bos taurus BAC CH240-161G19 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 180767 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaa 364 |||||||||||||||||| |||||| Sbjct: 167897 aataaaatttaaaaagaaaaaaaaa 167921
>gb|AC130210.4| Mus musculus BAC clone RP24-344N22 from chromosome 7, complete sequence Length = 186858 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaa 364 |||||||||||||||||| |||||| Sbjct: 175834 aataaaatttaaaaagaaaaaaaaa 175858
>gb|BC042348.1| Xenopus laevis hypothetical protein MGC52773, mRNA (cDNA clone MGC:52773 IMAGE:4684205), complete cds Length = 3288 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaa 364 |||||||||||||||||| |||||| Sbjct: 1550 aataaaatttaaaaagaaaaaaaaa 1526
>gb|AC109225.13| Mus musculus chromosome 19, clone RP23-395B21, complete sequence Length = 257062 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 taaaatttaaaaagaacaaaa 362 ||||||||||||||||||||| Sbjct: 225998 taaaatttaaaaagaacaaaa 226018
>gb|AC163276.4| Mus musculus chromosome 19, clone RP24-316F20, complete sequence Length = 169300 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 taaaatttaaaaagaacaaaa 362 ||||||||||||||||||||| Sbjct: 58403 taaaatttaaaaagaacaaaa 58423
>emb|AL109952.15|HSJ664K17 Human DNA sequence from clone RP4-664K17 on chromosome Xq21.33-22.2 Contains the 5' end of a novel gene (FLJ12687) and a novel gene (FLJ14084), complete sequence Length = 62195 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaa 364 ||||||||||||||| ||||||||| Sbjct: 51148 aataaaatttaaaaataacaaaaaa 51172
>gb|BC028603.1| Homo sapiens serine/threonine kinase 38 like, mRNA (cDNA clone MGC:33176 IMAGE:4823429), complete cds Length = 4725 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ctaatccttcttcttccatgg 113 ||||||||||||||||||||| Sbjct: 348 ctaatccttcttcttccatgg 328
>gb|AY188957.1| Pitcairnia geyskesii clone 2 microsatellite sequence Length = 275 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 atttaaaaagaacaaaaaaga 366 ||||||||||||||||||||| Sbjct: 253 atttaaaaagaacaaaaaaga 233
>emb|AJ278986.2|PET278986 Pichia etchellsii plasmid pPE1B Length = 12835 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 348 ttaaaaagaacaaaaaagaag 368 ||||||||||||||||||||| Sbjct: 4129 ttaaaaagaacaaaaaagaag 4109
>gb|AC091589.8| Homo sapiens chromosome 18, clone RP11-635B11, complete sequence Length = 177680 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 339 caataaaatttaaaaagaacaaaaa 363 ||||||||||||||| ||||||||| Sbjct: 67243 caataaaatttaaaatgaacaaaaa 67219
>gb|AC022868.10| Homo sapiens chromosome 8, clone RP11-367E12, complete sequence Length = 166018 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaaa 363 ||||||||||||||||||||| Sbjct: 42994 aaaatttaaaaagaacaaaaa 43014
>emb|CR606717.1| full-length cDNA clone CS0DJ011YL06 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1687 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ctaatccttcttcttccatgg 113 ||||||||||||||||||||| Sbjct: 225 ctaatccttcttcttccatgg 205
>emb|CR602115.1| full-length cDNA clone CS0DI072YF14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1722 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ctaatccttcttcttccatgg 113 ||||||||||||||||||||| Sbjct: 243 ctaatccttcttcttccatgg 223
>gb|AC092829.4| Homo sapiens 12 BAC RP11-165P7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 116783 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 ctaatccttcttcttccatgg 113 ||||||||||||||||||||| Sbjct: 104721 ctaatccttcttcttccatgg 104741
>gb|AC114977.2| Homo sapiens chromosome 5 clone RP11-49C20, complete sequence Length = 180697 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaaa 363 ||||||||||||||||||||| Sbjct: 175128 aaaatttaaaaagaacaaaaa 175148
>gb|AC092801.2| Homo sapiens chromosome 1 clone RP11-36N20, complete sequence Length = 151199 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaa 360 ||||||||||||||||||||| Sbjct: 139243 aataaaatttaaaaagaacaa 139223
>gb|AC093264.2| Homo sapiens chromosome 5 clone RP11-263G2, complete sequence Length = 164217 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaaa 363 ||||||||||||||||||||| Sbjct: 141679 aaaatttaaaaagaacaaaaa 141659
>gb|AC158231.2| Mus musculus BAC clone RP24-510K1 from chromosome 7, complete sequence Length = 207943 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaa 364 |||||||||||||||||| |||||| Sbjct: 57782 aataaaatttaaaaagaaaaaaaaa 57806
>gb|AC157214.2| Mus musculus BAC clone RP23-35J2 from chromosome 19, complete sequence Length = 207625 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaaaagaa 367 ||||||||||||||| ||||||||| Sbjct: 59163 aaaatttaaaaagaaaaaaaaagaa 59187
>gb|AC094022.3| Homo sapiens chromosome 1 clone RP11-88N11, complete sequence Length = 187268 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaa 360 ||||||||||||||||||||| Sbjct: 127490 aataaaatttaaaaagaacaa 127510
>gb|AY335703.1| Synthetic construct Homo sapiens serine/threonine kinase 38 like (STK38L) mRNA, partial cds Length = 1395 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ctaatccttcttcttccatgg 113 ||||||||||||||||||||| Sbjct: 175 ctaatccttcttcttccatgg 155
>gb|AC159022.2| Pan troglodytes BAC clone CH251-510P23 from chromosome unknown, complete sequence Length = 185833 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaag 368 |||||| ||||||||||||| |||||||| Sbjct: 78423 aataaattttaaaaagaacagaaaagaag 78395
>gb|AC092682.2| Homo sapiens BAC clone RP11-734C21 from 2, complete sequence Length = 188920 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaaaagaa 367 |||| |||||||||||||||||||| Sbjct: 143131 aaaaattaaaaagaacaaaaaagaa 143155
>gb|AC158591.2| Pan troglodytes BAC clone CH251-526G18 from chromosome unknown, complete sequence Length = 179276 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 347 tttaaaaagaacaaaaaagaagtca 371 ||||||||||| ||||||||||||| Sbjct: 160649 tttaaaaagaagaaaaaagaagtca 160673
>gb|AC092453.10| Homo sapiens 12 BAC RP11-130L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160984 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 ctaatccttcttcttccatgg 113 ||||||||||||||||||||| Sbjct: 102642 ctaatccttcttcttccatgg 102662
>gb|AC090551.6| Homo sapiens chromosome 16 clone RP11-197K24, complete sequence Length = 174737 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaag 368 |||||| ||||||||||||| |||||||| Sbjct: 103221 aataaattttaaaaagaacagaaaagaag 103193
>gb|AC139665.7| Homo sapiens 3 BAC RP11-171J7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 68343 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaa 364 ||||||||||||||||||| ||||| Sbjct: 19559 aataaaatttaaaaagaaccaaaaa 19583
>gb|AC073255.6| Homo sapiens BAC clone RP11-182E7 from 2, complete sequence Length = 183720 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaaa 363 ||||||||||||||||||||| Sbjct: 77489 aaaatttaaaaagaacaaaaa 77469
>ref|NM_015000.1| Homo sapiens serine/threonine kinase 38 like (STK38L), mRNA Length = 4725 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ctaatccttcttcttccatgg 113 ||||||||||||||||||||| Sbjct: 348 ctaatccttcttcttccatgg 328
>emb|BX649385.8| Zebrafish DNA sequence from clone CH211-127M24 in linkage group 20, complete sequence Length = 165089 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaa 364 |||||||||||||||||| |||||| Sbjct: 13799 aataaaatttaaaaagaaaaaaaaa 13823
>emb|AL928703.9| Mouse DNA sequence from clone RP23-308K19 on chromosome 2, complete sequence Length = 109891 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaa 364 ||||||||||||||| ||||||||| Sbjct: 100088 aataaaatttaaaaacaacaaaaaa 100112
>emb|AL844869.5| Mouse DNA sequence from clone RP23-437K18 on chromosome X, complete sequence Length = 207432 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaa 364 ||||||| ||||||||||||||||| Sbjct: 151545 aataaaaattaaaaagaacaaaaaa 151521
>emb|CR854941.8| Zebrafish DNA sequence from clone CH211-214G6 in linkage group 12, complete sequence Length = 135174 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 344 aaatttaaaaagaacaaaaaa 364 ||||||||||||||||||||| Sbjct: 29576 aaatttaaaaagaacaaaaaa 29556
>emb|BX323031.7| Zebrafish DNA sequence from clone DKEYP-7B3 in linkage group 18, complete sequence Length = 164748 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 172 catcatcatcatcttcccccttccc 196 ||||||||||||||||| ||||||| Sbjct: 148474 catcatcatcatcttcctccttccc 148450
>emb|CR954191.2| Medicago truncatula chromosome 5 clone mte1-26e13, COMPLETE SEQUENCE Length = 96667 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 348 ttaaaaagaacaaaaaagaag 368 ||||||||||||||||||||| Sbjct: 59155 ttaaaaagaacaaaaaagaag 59175
>gb|AC102209.11| Mus musculus chromosome 3, clone RP24-280F5, complete sequence Length = 170723 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaa 364 |||||||||||||||||| |||||| Sbjct: 46346 aataaaatttaaaaagaaaaaaaaa 46370
>dbj|AP003476.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB2033H1 Length = 179650 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 tttaaaaagaacaaaaaagaagtca 371 ||||||||||| ||||||||||||| Sbjct: 88692 tttaaaaagaagaaaaaagaagtca 88668
>gb|AC161018.4| Pan troglodytes BAC clone CH251-345F11 from chromosome unknown, complete sequence Length = 153379 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 347 tttaaaaagaacaaaaaagaagtca 371 ||||||||||| ||||||||||||| Sbjct: 141050 tttaaaaagaagaaaaaagaagtca 141026
>gb|AC172370.2| Gallus gallus BAC clone CH261-119J18 from chromosome ul, complete sequence Length = 260878 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 cctctttcatgctaaaaaaggaaaa 220 |||||| |||||||||||||||||| Sbjct: 257340 cctcttccatgctaaaaaaggaaaa 257364
>gb|AC005259.1|AC005259 Mouse BAC CitbCJ7 219m7, genomic sequence, complete sequence Length = 124230 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 aatttaaaaagaacaaaaaag 365 ||||||||||||||||||||| Sbjct: 89162 aatttaaaaagaacaaaaaag 89142
>gb|AC140277.3| Mus musculus BAC clone RP23-336O18 from 5, complete sequence Length = 198919 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 tcttcccccttcccctctttc 203 ||||||||||||||||||||| Sbjct: 34041 tcttcccccttcccctctttc 34061
>gb|AC163437.16| Mus musculus chromosome 5, clone RP23-119I18, complete sequence Length = 190996 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaaaagaa 367 |||| |||||||||||||||||||| Sbjct: 184296 aaaaattaaaaagaacaaaaaagaa 184272
>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete sequence Length = 208030 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 aatttaaaaagaacaaaaaag 365 ||||||||||||||||||||| Sbjct: 115419 aatttaaaaagaacaaaaaag 115439
>emb|AL606742.11| Mouse DNA sequence from clone RP23-70A7 on chromosome 3, complete sequence Length = 186559 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaa 364 |||||||||||||||||| |||||| Sbjct: 57812 aataaaatttaaaaagaaaaaaaaa 57788
>dbj|AB007973.1| Homo sapiens mRNA, chromosome 1 specific transcript KIAA0504 Length = 6397 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaa 360 ||||||||||||||||||||| Sbjct: 4077 aataaaatttaaaaagaacaa 4097
>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete sequence Length = 141790 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaaaagaa 367 ||||||||||||||| ||||||||| Sbjct: 28078 aaaatttaaaaagaaaaaaaaagaa 28102
>dbj|AB023182.2| Homo sapiens mRNA for KIAA0965 protein, partial cds Length = 5181 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 ctaatccttcttcttccatgg 113 ||||||||||||||||||||| Sbjct: 459 ctaatccttcttcttccatgg 439
>gb|BC086963.1| Danio rerio zgc:92134, mRNA (cDNA clone MGC:92134 IMAGE:7049137), complete cds Length = 2331 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ccatcatcatcatcttcccc 190 |||||||||||||||||||| Sbjct: 1794 ccatcatcatcatcttcccc 1813
>gb|AC162284.11| Mus musculus chromosome 8, clone RP23-256C11, complete sequence Length = 162981 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||||||||||||||| ||||| Sbjct: 68520 aataaaatttaaaaagaataaaaa 68497
>gb|L14561.1|HUMCAATPX Homo sapiens plasma membrane calcium ATPase isoform 1 (ATP2B1) gene, alternative splice products, partial cds Length = 50450 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 ||||||||||||||| || ||||||||| Sbjct: 2999 aataaaatttaaaaaaaagaaaaaagaa 3026
>gb|AC007862.7| Trypanosoma brucei chromosome 2 clone RPCI93-10C8, complete sequence Length = 150671 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 atttaaaaagaacaaaaaagaagt 369 |||||||||||| ||||||||||| Sbjct: 85844 atttaaaaagaaaaaaaaagaagt 85821
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence Length = 1193948 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 atttaaaaagaacaaaaaagaagt 369 |||||||||||| ||||||||||| Sbjct: 564248 atttaaaaagaaaaaaaaagaagt 564225
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 tccaataaaatttaaaaaga 356 |||||||||||||||||||| Sbjct: 3712186 tccaataaaatttaaaaaga 3712167
>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence Length = 190133 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ccaataaaatttaaaaagaa 357 |||||||||||||||||||| Sbjct: 1354 ccaataaaatttaaaaagaa 1335
>gb|AC149604.1| Mus musculus BAC clone RP23-472I3 from chromosome 15, complete sequence Length = 177501 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 135317 aataaaatttaaaaagaaca 135336
>gb|AC145602.3| Mus musculus BAC clone RP24-240M7 from chromosome Y, complete sequence Length = 160337 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaaaagaagtc 370 |||||| |||||||| |||||||||||| Sbjct: 159434 aaaattaaaaaagaataaaaaagaagtc 159407
>gb|AC136019.3| Mus musculus BAC clone RP24-404D22 from chromosome 14, complete sequence Length = 162787 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cttcccccttcccctctttc 203 |||||||||||||||||||| Sbjct: 60094 cttcccccttcccctctttc 60075
>emb|AJ249251.1|DVI249251 Drosophila virilis Kil-2 gene Length = 3114 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 341 ataaaatttaaaaagaacaaaaaagaag 368 ||||||||| ||||||||||||||||| Sbjct: 971 ataaaatttgcaaagaacaaaaaagaag 944
>gb|AC110883.12| Mus musculus chromosome 8, clone RP23-200N24, complete sequence Length = 293104 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||||||||||||||| ||||| Sbjct: 75053 aataaaatttaaaaagaaaaaaaa 75076
>gb|AC127416.7| Mus musculus BAC clone RP23-457J22 from chromosome 8, complete sequence Length = 206997 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||||||||||||||| ||||| Sbjct: 197621 aataaaatttaaaaagaataaaaa 197598
>gb|AC165348.3| Mus musculus BAC clone RP23-300C11 from chromosome 3, complete sequence Length = 198637 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ccaataaaatttaaaaagaa 357 |||||||||||||||||||| Sbjct: 185731 ccaataaaatttaaaaagaa 185750
>gb|AC116692.15| Mus musculus chromosome 1, clone RP24-355C22, complete sequence Length = 149630 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 90503 aataaaatttaaaaagaaca 90484
>gb|AC124680.10| Mus musculus chromosome 14, clone RP23-383A19, complete sequence Length = 202809 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tttaaaaagaacaaaaaaga 366 |||||||||||||||||||| Sbjct: 65849 tttaaaaagaacaaaaaaga 65830
>gb|AC147709.1| Mus musculus BAC clone RP24-97E15 from chromosome Y, complete sequence Length = 197983 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaaaagaagtc 370 |||||| |||||||| |||||||||||| Sbjct: 148992 aaaattaaaaaagaataaaaaagaagtc 149019
>gb|AC124770.4| Mus musculus BAC clone RP23-8J2 from chromosome 18, complete sequence Length = 216754 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 catcttcccccttcccctct 200 |||||||||||||||||||| Sbjct: 138300 catcttcccccttcccctct 138281 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 catcttcccccttcccctct 200 |||||||||||||||||||| Sbjct: 138208 catcttcccccttcccctct 138189 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 catcttcccccttcccctct 200 |||||||||||||||||||| Sbjct: 138185 catcttcccccttcccctct 138166
>gb|DQ483695.1| Gymnogyps californianus clone 118F microsatellite sequence Length = 512 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cttcccccttcccctctttc 203 |||||||||||||||||||| Sbjct: 324 cttcccccttcccctctttc 305
>ref|XM_533812.2| PREDICTED: Canis familiaris similar to Vpr-binding protein, transcript variant 1 (LOC476609), mRNA Length = 5748 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ataaaatttaaaaagaacaaaaaa 364 ||||||||||||||||| |||||| Sbjct: 4546 ataaaatttaaaaagaaaaaaaaa 4569
>ref|XM_845017.1| PREDICTED: Canis familiaris similar to Vpr-binding protein, transcript variant 2 (LOC476609), mRNA Length = 4737 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ataaaatttaaaaagaacaaaaaa 364 ||||||||||||||||| |||||| Sbjct: 3535 ataaaatttaaaaagaaaaaaaaa 3558
>emb|CT010495.9| Mouse DNA sequence from clone RP23-226G14 on chromosome 17, complete sequence Length = 202526 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ttaaaaagaacaaaaaagaa 367 |||||||||||||||||||| Sbjct: 143415 ttaaaaagaacaaaaaagaa 143396
>gb|AC146214.2| Pan troglodytes BAC clone CH251-295K11 from Y, complete sequence Length = 172148 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 taaaatttaaaaagaacaaaaaag 365 |||||||||||||||| ||||||| Sbjct: 114916 taaaatttaaaaagaaaaaaaaag 114893
>ref|XM_567662.1| Cryptococcus neoformans var. neoformans JEC21 protein-vacuolar targeting-related protein (CNK01830) partial mRNA Length = 2312 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 catcatcatcttcccccttc 194 |||||||||||||||||||| Sbjct: 1568 catcatcatcttcccccttc 1549
>ref|XM_568807.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNB01350) partial mRNA Length = 2577 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 tcttcccccttcccctcttt 202 |||||||||||||||||||| Sbjct: 1654 tcttcccccttcccctcttt 1635
>gb|AC125103.4| Mus musculus BAC clone RP24-218M19 from chromosome 3, complete sequence Length = 184917 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 aatttaaaaagaacaaaaaagaag 368 ||||||||||||| |||||||||| Sbjct: 23592 aatttaaaaagaaaaaaaaagaag 23615
>gb|AC121846.3| Mus musculus BAC clone RP24-83D6 from chromosome 15, complete sequence Length = 182309 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 131109 aataaaatttaaaaagaaca 131090
>gb|AC121593.3| Mus musculus BAC clone RP23-292N18 from 6, complete sequence Length = 179881 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ttcttcttccatggttgcat 119 |||||||||||||||||||| Sbjct: 96589 ttcttcttccatggttgcat 96608
>gb|AC107794.13| Mus musculus chromosome 6, clone RP23-473P21, complete sequence Length = 183349 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 38058 aataaaatttaaaaagaaca 38077
>ref|XM_671251.1| Plasmodium berghei strain ANKA hypothetical protein (PB000814.00.0) partial mRNA Length = 3087 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 ttaaaaagaacaaaaaagaa 367 |||||||||||||||||||| Sbjct: 1784 ttaaaaagaacaaaaaagaa 1803
>gb|AC149067.3| Mus musculus BAC clone RP23-56C20 from chromosome 7, complete sequence Length = 267610 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 145956 aataaaatttaaaaagaaca 145937
>gb|AC160547.6| Mus musculus chromosome 8, clone RP23-240F23, complete sequence Length = 170722 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||||||||||||||| ||||| Sbjct: 168108 aataaaatttaaaaagaataaaaa 168085
>gb|AY352277.1| Apis mellifera complementary sex determiner (csd) gene, csd-cons28-11 allele; and EX4.8-5.8 (Ex4.8-5.8) gene, complete cds Length = 23545 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 6573 aaaatttaaaaagaacaaaa 6554
>emb|BX001039.5| Human DNA sequence from clone DAQB-309N16 on chromosome 6 Contains the 5' end of the C6orf10 gene for chromosome 6 open reading frame 10 (TSBP), the HNRPA1P2 pseudogene for heterogeneous nuclear ribonucleoprotein A1 pseudogene 2 and no CpG islands, complete sequence Length = 58428 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 15065 aaaatttaaaaagaacaaaa 15046
>emb|AL670296.7| Human DNA sequence from clone XXbac-213L12 on chromosome 6 contains the 5' end of the gene for chromosome 6 open reading frame 10, a putative novel transcript, the BTNL2 gene for butyrophilin-like 2, the HLA-DRA gene for major histocompatibility complex, class II, DR alpha, the major histocompatibility complex, class II, DR beta 9 pseudogene and one CpG island, complete sequence Length = 160623 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 9432 aaaatttaaaaagaacaaaa 9413
>emb|AL662796.6| Human DNA sequence from clone XXbac-290C9 on chromosome 6 Contains the 5' end of the C6orf10 gene for chromosome 6 open reading frame 10, the HCG23 gene for HLA complex group 23, 2 fragments of BTNL2 gene for butyrophilin-like 2 (MHC class II associated), the HLA-DRA gene for the major histocompatibility complex, class II, DR alpha (HLA-DRA1) and one CpG island, complete sequence Length = 130102 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 9644 aaaatttaaaaagaacaaaa 9625
>emb|AL591766.20| Human DNA sequence from clone RP11-429N14 on chromosome X Contains the 5' end of the PRKWNK3 gene for lysine deficient protein kinase 3 and a CpG island, complete sequence Length = 73084 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||||||||||||||| ||||| Sbjct: 4673 aataaaatttaaaaagaaaaaaaa 4696
>emb|AL591004.3| Human DNA sequence from clone RP11-497F24 on chromosome 6, complete sequence Length = 159845 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaaaaga 366 ||||||||||||||| |||||||| Sbjct: 118803 aaaatttaaaaagaaaaaaaaaga 118780
>emb|AL583962.5| Human DNA sequence from clone LA20-VLA2066F10L on chromosome 20 Contains part of the BPI gene for bactericidal/permeability-increasing protein, complete sequence Length = 6086 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 ccatcatcatcatcttcccc 190 |||||||||||||||||||| Sbjct: 2176 ccatcatcatcatcttcccc 2157
>emb|AL162493.21| Human DNA sequence from clone RP11-120L14 on chromosome 13, complete sequence Length = 158083 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 aaatttaaaaagaacaaaaaagaa 367 |||||||||||||| ||||||||| Sbjct: 67361 aaatttaaaaagaaaaaaaaagaa 67338
>gb|AC072046.11| Homo sapiens 3 BAC RP11-450H5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186117 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 ||||||||||||| |||| ||||||||| Sbjct: 141777 aataaaatttaaatagaataaaaaagaa 141750
>emb|AL132866.29|HSJ994O24 Human DNA sequence from clone RP5-994O24 on chromosome 20 Contains part of the NFATC2 gene for cytoplasmic calcineurin-dependent (2) nuclear factor of activated T-cells and two CpG islands, complete sequence Length = 56415 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 aaaaagaacaaaaaagaagt 369 |||||||||||||||||||| Sbjct: 50601 aaaaagaacaaaaaagaagt 50620
>gb|AC158926.4| Mus musculus chromosome 3, clone RP24-93J4, complete sequence Length = 185247 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 129608 aataaaatttaaaaagaaca 129627
>emb|AL034394.2|HS1077I5 Human DNA sequence from clone RP5-1077I5 on chromosome 6p21.2-21.32 Contains the 3' end of the BTNL2 gene encoding butyrophilin-like 2 (MHC class II associated) (BTL-II), the 5' end of the C6ORF10 gene encoding the testis specific basic protein (TSBP), a putative novel gene, a CpG island, ESTs, STSs and GSSs, complete sequence Length = 75335 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 69375 aaaatttaaaaagaacaaaa 69394
>emb|AL023583.25|HS500L14 Human DNA sequence from clone RP3-500L14 on chromosome 6p23-24.3 Contains a novel gene (FLJ20958) and four CpG islands, complete sequence Length = 123830 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 64228 aaaatttaaaaagaacaaaa 64247
>gb|AC098591.4| Homo sapiens BAC clone RP11-333E13 from 4, complete sequence Length = 179641 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 341 ataaaatttaaaaagaacaaaaaa 364 |||||||||||||| ||||||||| Sbjct: 45293 ataaaatttaaaaaaaacaaaaaa 45316
>gb|BC045733.1| Homo sapiens KIAA1443, mRNA (cDNA clone IMAGE:4822379), containing frame-shift errors Length = 1766 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 172 catcatcatcatcttcccccttcccctc 199 ||||||||||||||||| ||| |||||| Sbjct: 1617 catcatcatcatcttcctcctccccctc 1590
>gb|AC159892.2| Mus musculus BAC clone RP23-313P23 from chromosome 9, complete sequence Length = 199351 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 ccaataaaatttaaaaagaacaaa 361 |||||||||||||| ||||||||| Sbjct: 130155 ccaataaaatttaacaagaacaaa 130132
>gb|AC068641.18| Homo sapiens 12 BAC RP11-981P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106525 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 ||||||||||||||| || ||||||||| Sbjct: 62279 aataaaatttaaaaaaaagaaaaaagaa 62306
>emb|BX470109.3| Mouse DNA sequence from clone RP23-59I3 on chromosome 4, complete sequence Length = 228869 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 144213 aataaaatttaaaaagaaca 144194
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 tcttcccccttcccctcttt 202 |||||||||||||||||||| Sbjct: 404912 tcttcccccttcccctcttt 404931
>gb|AC123760.9| Mus musculus chromosome 1, clone RP24-327B7, complete sequence Length = 171818 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 26111 aataaaatttaaaaagaaca 26130
>emb|CR752644.6| Human DNA sequence from clone DADB-254M3 on chromosome 6, complete sequence Length = 67131 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 1058 aaaatttaaaaagaacaaaa 1039
>emb|CR751604.3| Human DNA sequence from clone DADB-341G19 on chromosome 6, complete sequence Length = 19436 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 18494 aaaatttaaaaagaacaaaa 18475
>gb|AC153857.7| Mus musculus 6 BAC RP23-158G17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215780 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 ccaataaaatttaaaaagaacaaa 361 |||||||||||||| ||||||||| Sbjct: 54971 ccaataaaatttaacaagaacaaa 54948
>gb|AC093333.7| Homo sapiens chromosome 8, clone RP11-470N15, complete sequence Length = 187680 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 338 ccaataaaatttaaaaagaacaaaaaag 365 |||| |||| |||||||||||||||||| Sbjct: 135208 ccaacaaaaattaaaaagaacaaaaaag 135235
>gb|AC011504.3| Homo sapiens chromosome 19 clone CTD-2001J20, complete sequence Length = 137075 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 |||||| ||||||||||| ||||||||| Sbjct: 39338 aataaattttaaaaagaaaaaaaaagaa 39311
>dbj|BS000531.1| Pan troglodytes chromosome Y clone:PTB-018L03, complete sequences Length = 161297 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 taaaatttaaaaagaacaaaaaag 365 |||||||||||||||| ||||||| Sbjct: 85147 taaaatttaaaaagaaaaaaaaag 85170
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 taaaatttaaaaagaacaaaaaag 365 |||||||||||||||| ||||||| Sbjct: 19899529 taaaatttaaaaagaaaaaaaaag 19899506
>ref|NM_001004816.2| Xenopus tropicalis MGC69246 protein (MGC69246), mRNA Length = 1663 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||||||||||||||| ||||| Sbjct: 1558 aataaaatttaaaaagaaaaaaaa 1535
>gb|AC116663.1| Rattus norvegicus, clone RP31-109I17, complete sequence Length = 165658 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaaaaga 366 ||||||||||||||| |||||||| Sbjct: 118314 aaaatttaaaaagaaaaaaaaaga 118337
>gb|AC104741.2| Homo sapiens chromosome 3 clone RP11-228H5, complete sequence Length = 168433 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 ||||||||||||||| || ||||||||| Sbjct: 104966 aataaaatttaaaaaaaagaaaaaagaa 104939
>gb|AC090643.22| Homo sapiens 12q BAC RP11-489P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 52154 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 atcatcttcccccttcccct 198 |||||||||||||||||||| Sbjct: 34223 atcatcttcccccttcccct 34204
>gb|AC097486.2| Homo sapiens BAC clone RP11-213L8 from 4, complete sequence Length = 158271 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 tttttcctctaatccttctt 104 |||||||||||||||||||| Sbjct: 127930 tttttcctctaatccttctt 127911
>gb|AC012032.22| Homo sapiens 3 BAC RP11-630D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 122889 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||||||||||||||| ||||| Sbjct: 114735 aataaaatttaaaaagaaaaaaaa 114758
>dbj|AK148117.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370023B02 product:RAB7, member RAS oncogene family, full insert sequence Length = 2151 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 ccaataaaatttaaaaagaacaaa 361 |||||||||||||| ||||||||| Sbjct: 2126 ccaataaaatttaacaagaacaaa 2149
>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence Length = 206310 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ccaataaaatttaaaaagaa 357 |||||||||||||||||||| Sbjct: 130995 ccaataaaatttaaaaagaa 130976
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold Length = 1889755 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 aaatttaaaaagaacaaaaaagaa 367 ||||||||||| |||||||||||| Sbjct: 1046358 aaatttaaaaacaacaaaaaagaa 1046335
>gb|AC124042.3| Oryctolagus cuniculus clone LB1-56H19, complete sequence Length = 194657 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 aaatttaaaaagaacaaaaaagaa 367 ||||||||||| |||||||||||| Sbjct: 43408 aaatttaaaaacaacaaaaaagaa 43385
>gb|AC147774.3| Medicago truncatula chromosome 2 BAC clone mth2-10c8, complete sequence Length = 110758 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 taaaatttaaaaagaacaaaaaag 365 |||||| ||||||||||||||||| Sbjct: 65573 taaaatgtaaaaagaacaaaaaag 65596
>emb|BX908732.13| Human DNA sequence from clone DAMA-178J18 on chromosome 6, complete sequence Length = 101860 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 3399 aaaatttaaaaagaacaaaa 3380
>gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosome 17, complete sequence Length = 161377 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ccaataaaatttaaaaagaa 357 |||||||||||||||||||| Sbjct: 26705 ccaataaaatttaaaaagaa 26686
>gb|AC154357.2| Mus musculus BAC clone RP23-192E11 from chromosome 9, complete sequence Length = 195151 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ttcttcttccatggttgcat 119 |||||||||||||||||||| Sbjct: 28724 ttcttcttccatggttgcat 28743
>dbj|AK047750.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030023L23 product:unclassifiable, full insert sequence Length = 1899 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaaaaga 366 ||||||||||||||| |||||||| Sbjct: 479 aaaatttaaaaagaaaaaaaaaga 456
>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203418 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 ccaataaaatttaaaaagaacaaa 361 |||||||||||||| ||||||||| Sbjct: 180505 ccaataaaatttaacaagaacaaa 180482
>gb|AC016763.8| Homo sapiens BAC clone RP11-548K3 from 2, complete sequence Length = 143283 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cttcccccttcccctctttc 203 |||||||||||||||||||| Sbjct: 27346 cttcccccttcccctctttc 27327
>gb|AC092641.2| Homo sapiens BAC clone RP11-389F18 from 2, complete sequence Length = 219175 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 atttaaaaagaacaaaaaag 365 |||||||||||||||||||| Sbjct: 74843 atttaaaaagaacaaaaaag 74862
>gb|AC093570.30| Mus musculus strain C57BL/6J chromosome 5 clone rp23-115a12, complete sequence Length = 203838 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||| ||||||||||||||||| Sbjct: 39232 aataaattttaaaaagaacaaaaa 39255
>gb|AC019178.7| Homo sapiens BAC clone RP11-235L22 from 2, complete sequence Length = 107330 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||||||||||||||| ||||| Sbjct: 35394 aataaaatttaaaaagaaaaaaaa 35371
>gb|AC025522.7| Homo sapiens chromosome 8, clone RP11-599P7, complete sequence Length = 173270 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 338 ccaataaaatttaaaaagaacaaaaaag 365 |||| |||| |||||||||||||||||| Sbjct: 135191 ccaacaaaaattaaaaagaacaaaaaag 135164
>ref|XM_347335.2| PREDICTED: Rattus norvegicus homeo box C8 (Hoxc8), mRNA Length = 2005 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaaaaga 366 ||||||||||||||| |||||||| Sbjct: 1595 aaaatttaaaaagaaaaaaaaaga 1618
>ref|NM_001008574.1| Danio rerio zgc:92134 (zgc:92134), mRNA Length = 2331 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ccatcatcatcatcttcccc 190 |||||||||||||||||||| Sbjct: 1794 ccatcatcatcatcttcccc 1813
>dbj|AK174028.1| Ciona intestinalis cDNA, clone:ciad029d24, full insert sequence Length = 1165 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 aatttaaaaagaacaaaaaa 364 |||||||||||||||||||| Sbjct: 939 aatttaaaaagaacaaaaaa 920
>emb|BX842672.2| Mouse DNA sequence from clone RP23-302N20 on chromosome 4, complete sequence Length = 27369 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 24570 aataaaatttaaaaagaaca 24551
>emb|AL935129.25| Mouse DNA sequence from clone RP23-181O3 on chromosome 2, complete sequence Length = 216639 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 |||||||||||||||||| | ||||||| Sbjct: 99633 aataaaatttaaaaagaaaagaaaagaa 99606
>emb|BX005158.8| Zebrafish DNA sequence from clone DKEY-222N6 in linkage group 8, complete sequence Length = 74638 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 aaatttaaaaagaacaaaaaagaa 367 |||||||||| ||||||||||||| Sbjct: 8692 aaatttaaaatgaacaaaaaagaa 8669
>gb|AC154423.2| Mus musculus BAC clone RP24-221B7 from 17, complete sequence Length = 172011 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 ttaaaaagaacaaaaaagaa 367 |||||||||||||||||||| Sbjct: 83444 ttaaaaagaacaaaaaagaa 83463
>emb|Z82211.1|HS447N6 Human DNA sequence from clone RP3-447N6 on chromosome X, complete sequence Length = 132229 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 ||||||||||||||| || ||||||||| Sbjct: 44696 aataaaatttaaaaaaaaaaaaaaagaa 44669
>emb|BX571854.11| Zebrafish DNA sequence from clone CH211-195O19 in linkage group 20, complete sequence Length = 194209 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 atttaaaaagaacaaaaaag 365 |||||||||||||||||||| Sbjct: 150321 atttaaaaagaacaaaaaag 150302
>gb|AC153875.3| Mus musculus 6 BAC RP23-218N14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187367 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 145734 aataaaatttaaaaagaaca 145753
>emb|AL132952.1|CEY51H4A Caenorhabditis elegans YAC Y51H4A, complete sequence Length = 269619 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 ccatcatcatcatcttcccccttc 194 ||||||||||||||||||| |||| Sbjct: 20850 ccatcatcatcatcttccctcttc 20827
>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7, complete sequence Length = 170614 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaaca 359 |||||||||||||||||||| Sbjct: 163580 aataaaatttaaaaagaaca 163561
>emb|CR848479.2| Xenopus tropicalis finished cDNA, clone TEgg006i15 Length = 1663 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||||||||||||||| ||||| Sbjct: 1558 aataaaatttaaaaagaaaaaaaa 1535
>gb|AC107776.12| Mus musculus chromosome 17, clone RP23-92G2, complete sequence Length = 147077 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 ttaaaaagaacaaaaaagaa 367 |||||||||||||||||||| Sbjct: 145449 ttaaaaagaacaaaaaagaa 145468
>emb|CT030659.8| Mouse DNA sequence from clone RP23-125F8 on chromosome 9, complete sequence Length = 199662 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 aaaatttaaaaagaacaaaaaaga 366 ||||||||||||||| |||||||| Sbjct: 47399 aaaatttaaaaagaaaaaaaaaga 47422
>gb|AC084322.17| Mus musculus strain C57BL/6J chromosome 5 clone rp23-376e18, complete sequence Length = 104872 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 aataaaatttaaaaagaacaaaaa 363 |||||| ||||||||||||||||| Sbjct: 78747 aataaattttaaaaagaacaaaaa 78770
>gb|AC120353.9| Mus musculus chromosome 5, clone RP24-239E2, complete sequence Length = 182659 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 aaaaagaacaaaaaagaagt 369 |||||||||||||||||||| Sbjct: 81106 aaaaagaacaaaaaagaagt 81125
>emb|AL033514.1|CEY75B8A Caenorhabditis elegans YAC Y75B8A, complete sequence Length = 298406 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 aatttaaaaagaacaaaaaagaag 368 ||||||||||||| |||||||||| Sbjct: 54207 aatttaaaaagaaaaaaaaagaag 54184
>dbj|AP003392.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-110I1, complete sequence Length = 178341 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 taaaatttaaaaagaacaaaaaag 365 ||||||||||||| |||||||||| Sbjct: 99161 taaaatttaaaaacaacaaaaaag 99138
>gb|AC134555.4| Mus musculus BAC clone RP24-320K4 from 17, complete sequence Length = 174388 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ccaataaaatttaaaaagaa 357 |||||||||||||||||||| Sbjct: 19823 ccaataaaatttaaaaagaa 19842
>gb|AC132306.3| Mus musculus BAC clone RP24-289O21 from 3, complete sequence Length = 151208 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 ccaataaaatttaaaaagaa 357 |||||||||||||||||||| Sbjct: 30211 ccaataaaatttaaaaagaa 30230
>emb|Z48585.1|CEZK673 Caenorhabditis elegans Cosmid ZK673, complete sequence Length = 27540 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 aaaaagaacaaaaaagaagt 369 |||||||||||||||||||| Sbjct: 20031 aaaaagaacaaaaaagaagt 20012
>emb|CR956393.14| Pig DNA sequence from clone CH242-163M14 on chromosome 17, complete sequence Length = 195684 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 caataaaatttaaaaagaacaaaa 362 |||||||||||||||| ||||||| Sbjct: 97161 caataaaatttaaaaaaaacaaaa 97184
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 tcggcggacagacgaccatc 293 |||||||||||||||||||| Sbjct: 442787 tcggcggacagacgaccatc 442806
>emb|AL807775.8| Mouse DNA sequence from clone RP23-149H3 on chromosome X, complete sequence Length = 185599 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 aaaatttaaaaagaacaaaa 362 |||||||||||||||||||| Sbjct: 106068 aaaatttaaaaagaacaaaa 106049
>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete sequence Length = 226637 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 340 aataaaatttaaaaagaacaaaaaagaa 367 |||||||||||||||||| | ||||||| Sbjct: 87201 aataaaatttaaaaagaagagaaaagaa 87174
>emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chromosome 4, complete sequence Length = 232070 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tcatcttcccccttcccctc 199 |||||||||||||||||||| Sbjct: 142977 tcatcttcccccttcccctc 142996
>emb|AL499608.3|CNS07EF0 Human chromosome 14 DNA sequence Partial sequence from BAC R-684G2_PCR1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 28540 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 atttaaaaagaacaaaaaag 365 |||||||||||||||||||| Sbjct: 16243 atttaaaaagaacaaaaaag 16224
>emb|AL844557.3| Mouse DNA sequence from clone RP23-203N14 on chromosome 2, complete sequence Length = 122538 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 ttaaaaagaacaaaaaagaagtca 371 |||||||||||||||| ||||||| Sbjct: 76653 ttaaaaagaacaaaaaggaagtca 76630
>emb|AL844884.5| Mouse DNA sequence from clone RP23-266B14 on chromosome 2, complete sequence Length = 150285 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 cttcttccatggttgcatggctgc 125 |||||||||||||||| ||||||| Sbjct: 87880 cttcttccatggttgcctggctgc 87857 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,058,725 Number of Sequences: 3902068 Number of extensions: 6058725 Number of successful extensions: 195115 Number of sequences better than 10.0: 190 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 194391 Number of HSP's gapped (non-prelim): 722 length of query: 382 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 360 effective length of database: 17,147,199,772 effective search space: 6172991917920 effective search space used: 6172991917920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
