Clone Name | rbastl20b11 |
---|---|
Clone Library Name | barley_pub |
>ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like protein 3)| Length = 317 Score = 30.8 bits (68), Expect = 1.6 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +2 Query: 137 KQSDLQHRRTPSPSSQNTHHKS 202 +QS ++ R+PSPS++ THH+S Sbjct: 191 RQSTMRSARSPSPSARGTHHRS 212
>PSBS_SOLSG (Q9FPP4) Photosystem II 22 kDa protein, chloroplast precursor| (CP22) Length = 276 Score = 30.4 bits (67), Expect = 2.1 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +3 Query: 69 PLQAIQVPSSLLRFSTSKTELDSNKATSNIEGRLLQAAKTHITKV 203 PL ++ +PS LRFS+S T S+K TS AK KV Sbjct: 29 PLSSLFLPSLPLRFSSSTTNFSSSKFTSTTVALFKSKAKAPPKKV 73
>PSBS_LYCES (P54773) Photosystem II 22 kDa protein, chloroplast precursor| (CP22) Length = 276 Score = 30.4 bits (67), Expect = 2.1 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +3 Query: 69 PLQAIQVPSSLLRFSTSKTELDSNKATSNIEGRLLQAAKTHITKV 203 PL ++ +PS LRFS+S T S+K TS AK KV Sbjct: 29 PLSSLFLPSLPLRFSSSSTNASSSKFTSTTVALFKSKAKAPPKKV 73
>YAV8_SCHPO (Q10177) Hypothetical protein C27F1.08 in chromosome I| Length = 521 Score = 30.0 bits (66), Expect = 2.8 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -2 Query: 196 VMCVLAAWRRRPSMLEVALFESNSVLLV 113 V+ VL AWR SML V +FE+ LLV Sbjct: 192 VLLVLIAWRPEGSMLSVRIFETAVALLV 219
>SALM_DROME (P39770) Homeotic protein spalt-major| Length = 1365 Score = 30.0 bits (66), Expect = 2.8 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Frame = +2 Query: 104 EVFNQQNRIRLKQSDLQHRRTPSPSSQNT---HHKSVHIYRQP 223 E +Q +++ + ++ RRTPSPSS++ HH+ H+ P Sbjct: 643 ERVEEQEQVKQEDHRIEPRRTPSPSSEHRSPHHHRHSHMGYPP 685
>DGKB_RAT (P49621) Diacylglycerol kinase beta (EC 2.7.1.107) (Diglyceride| kinase beta) (DGK-beta) (DAG kinase beta) (90 kDa diacylglycerol kinase) Length = 801 Score = 30.0 bits (66), Expect = 2.8 Identities = 16/60 (26%), Positives = 25/60 (41%) Frame = +1 Query: 166 AFSKQPKHTSQKCAHLPPTSSMDQVTSAQNDAISFHCWKRASAPHRSSKHFAQATQFVGL 345 +F K H ++CA PP+ V S +N + H W + P + K + GL Sbjct: 275 SFCKYTVH--ERCARAPPSCIKTYVKSKKNTDVMHHYWVEGNCPTKCDKCHKTVKCYQGL 332
>GAPN_PEA (P81406) NADP-dependent glyceraldehyde-3-phosphate dehydrogenase| (EC 1.2.1.9) (Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (Glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (Triosephosphate dehydrogenase) Length = 496 Score = 29.3 bits (64), Expect = 4.7 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +1 Query: 172 SKQPKHTSQKCAHLPPTSSMDQVTSAQNDAISFHCWKRASAPHRSS 309 +++P++ Q C+ MD SAQ WKRA H+++ Sbjct: 40 TRKPQYKVQACSQEEVNKVMDSAKSAQKSWAKTPLWKRAELLHKAA 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,850,188 Number of Sequences: 219361 Number of extensions: 1317033 Number of successful extensions: 3600 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3537 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3600 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)