>YCQ9_SCHPO (O13674) Hypothetical RNA-binding protein C74.09 in chromosome III|
          Length = 654

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +3

Query: 6   QKKVHVEYENFNKLQSTNILLKSLVAEVHFITYKDATSDLPVL*C 140
           +K++   +  F K++   IL K  +A VHF+  +DA   +  L C
Sbjct: 312 EKEIEEAFGKFGKIEHIKILSKKNIAFVHFLNIRDAIKVVRTLSC 356

>CYPC_BACSU (O31440) Cytochrome P450 152A1 (EC 1.14.-.-) (P450BsBeta) (Fatty|
           acid beta-hydroxylase)
          Length = 417

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = +2

Query: 155 LTAQVPHAVSSQESNFTLK---CYINNRTLALNKRKITMSTRAQNFICITTLEAS 310
           +  Q+PH  S   S   LK    +I NRT   N          +NFIC+T  EA+
Sbjct: 1   MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAA 55

>S230_PLAFO (P68875) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 155  LTAQVPHAVSSQESNFTLKCYINNRTLALNKRKITMSTRAQNFI 286
            +T + PH       NFT K Y  N +L  N +KI ++   +NF+
Sbjct: 2486 VTIKCPHT-----KNFTPKDYFPNSSLITNDKKIVITFDKKNFV 2524

>S230_PLAF7 (P68874) Transmission-blocking target antigen S230 precursor|
          Length = 3135

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 155  LTAQVPHAVSSQESNFTLKCYINNRTLALNKRKITMSTRAQNFI 286
            +T + PH       NFT K Y  N +L  N +KI ++   +NF+
Sbjct: 2486 VTIKCPHT-----KNFTPKDYFPNSSLITNDKKIVITFDKKNFV 2524

>MUTS_DEHE1 (Q3Z767) DNA mismatch repair protein mutS|
          Length = 858

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +2

Query: 158 TAQVPHAVSSQESNFTLKCYINNRTLALNKRKITMSTRAQNFICITTLEASI---TPTCL 328
           T   P+ + S+++NF L  Y+   +  L    I+ S      + I  LEA I    P  +
Sbjct: 112 TVVEPNLLDSKQNNFLLSLYLTEDSCGLAFADISTSEFGCTQLDINGLEAEINRLNPAEI 171

Query: 329 LIPFSQT 349
           ++P SQ+
Sbjct: 172 ILPKSQS 178

>SYQ_DROME (Q9Y105) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18)|
           (Glutamine--tRNA ligase) (GlnRS)
          Length = 778

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 176 HEVPVQLEIPDMTSKNWQITRGILIRYEMYLSDQTFQ 66
           H  PVQLE+PD      Q T  I +   +Y+    F+
Sbjct: 587 HAAPVQLEVPDFPQNPQQGTHKITLDKVIYIEQGDFK 623

>RNAS8_MIOTA (Q8SPZ7) Ribonuclease 8 precursor (EC 3.1.27.-) (RNase 8)|
          Length = 154

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 197 LILGMTLHEVPVQLEIPDMTSKNWQITRGI 108
           L+LG+ + ++PV  +  DMTS  W  T+ +
Sbjct: 14  LLLGLRVAQIPVSAKPKDMTSSQWFKTQHV 43

>PHAAB_RHIME (Q52978) Probable K(+)/H(+) antiporter subunit A/B (pH adaptation|
           potassium efflux system protein A/B) (Pha system subunit
           A/B)
          Length = 999

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 321 VGVIEASNVVMQMKFWALVDIVIFLL 244
           +GV+ + N+++   FW L  IV FLL
Sbjct: 150 LGVVLSGNLILLAVFWELTSIVSFLL 175

>RNAS8_CERAE (Q8SPZ6) Ribonuclease 8 precursor (EC 3.1.27.-) (RNase 8)|
          Length = 154

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 197 LILGMTLHEVPVQLEIPDMTSKNWQITRGI 108
           L+LG+ + ++PV  +  DMTS  W  T+ +
Sbjct: 14  LLLGLWVAQIPVSAKPKDMTSSQWFKTQHV 43

>CD2_HORSE (P37998) T-cell surface antigen CD2 precursor|
          Length = 347

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 194 SNFTLKCYINNRTLALNKRKITMSTRAQNFI 286
           ++F LK Y+N R +  + RK+ +  RA N I
Sbjct: 147 TDFELKLYLNGRMIQKSPRKVIVYKRASNQI 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,267,231
Number of Sequences: 219361
Number of extensions: 963415
Number of successful extensions: 1958
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1958
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)