ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl20b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108552.1| Zea mays PCO091023 mRNA sequence 170 2e-39
2ref|XM_479734.1| Oryza sativa (japonica cultivar-group), mRNA 155 1e-34
3ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group... 155 1e-34
4dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
5dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
7dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
8ref|XM_463544.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
9dbj|AK072566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
10gb|AY219234.1| Nicotiana tabacum arm repeat-containing protein m... 46 0.097
11gb|AC139575.3| Mus musculus BAC clone RP23-430K5 from 8, complet... 46 0.097
12gb|AE000657.1| Aquifex aeolicus VF5, complete genome 44 0.38
13ref|NM_204735.1| Gallus gallus myosin VI (MYO6), mRNA 40 6.0
14gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete... 40 6.0
15gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosom... 40 6.0
16emb|CR847897.15| Zebrafish DNA sequence from clone DKEY-90L8 in ... 40 6.0
17emb|AJ278608.1|GGA278608 Gallus gallus mRNA for myosin VI (CMY6 ... 40 6.0
18gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.0
19dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 6.0
20gb|AC092438.5| Homo sapiens BAC clone RP11-367M19 from 4, comple... 40 6.0
21emb|CR385693.1| Gallus gallus finished cDNA, clone ChEST879l11 40 6.0
22gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45... 40 6.0
23gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 6.0
24gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complet... 40 6.0
25gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, compl... 40 6.0
26gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 6.0
27emb|X54489.1|HSMGSAG Human gene for melanoma growth stimulatory ... 40 6.0 
>gb|AY108552.1| Zea mays PCO091023 mRNA sequence
          Length = 594

 Score =  170 bits (86), Expect = 2e-39
 Identities = 150/170 (88%), Gaps = 1/170 (0%)
 Strand = Plus / Minus

                                                                       
Query: 246 ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 305
           ||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||| |||
Sbjct: 492 ttcccatgtctttg-ctgcggaagtagctcagaagcgcttgtgccttctctcttgcccgc 434

                                                                       
Query: 306 ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 365
           ||||| ||||||||||| || ||||||||||||||||| ||||||||||| |||||||| 
Sbjct: 433 ggtgttcctgactgtgaaagggcgactagagggggcactgcaccctcttgaagaactata 374

                                                             
Query: 366 ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagc 415
           ||||| ||||||||||||||||| || |||||||||||||| || |||||
Sbjct: 373 ctgcaaaacctgttgctgtttgtacagagctgaagcaacgcagccgcagc 324
to top
>ref|XM_479734.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2952

 Score =  155 bits (78), Expect = 1e-34
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 305
            |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 2575 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgccttctctcttgcccgt 2516

                                                                        
Query: 306  ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 365
            || || |||||||||||||  || |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2515 ggcgtgcctgactgtgacaatgcaactagaggaggcacagcaccctcttgaagaactata 2456

                                                                        
Query: 366  ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagcgttttctttc 425
            ||||| || ||| |||||||||| |||||||||||||| || || || || ||||| |||
Sbjct: 2455 ctgcaaaatctgctgctgtttgtacatagctgaagcaatgctgcagccgcattttccttc 2396

                          
Query: 426  ccccgcgctgaacc 439
            ||||  ||||||||
Sbjct: 2395 ccccttgctgaacc 2382



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 108  tctcaatttgactataaacaa 128
            |||||||||||||||||||||
Sbjct: 2720 tctcaatttgactataaacaa 2700
to top
>ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group), P0007D08.34 mRNA
          Length = 2953

 Score =  155 bits (78), Expect = 1e-34
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 305
            |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 2576 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgccttctctcttgcccgt 2517

                                                                        
Query: 306  ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 365
            || || |||||||||||||  || |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2516 ggcgtgcctgactgtgacaatgcaactagaggaggcacagcaccctcttgaagaactata 2457

                                                                        
Query: 366  ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagcgttttctttc 425
            ||||| || ||| |||||||||| |||||||||||||| || || || || ||||| |||
Sbjct: 2456 ctgcaaaatctgctgctgtttgtacatagctgaagcaatgctgcagccgcattttccttc 2397

                          
Query: 426  ccccgcgctgaacc 439
            ||||  ||||||||
Sbjct: 2396 ccccttgctgaacc 2383



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 108  tctcaatttgactataaacaa 128
            |||||||||||||||||||||
Sbjct: 2721 tctcaatttgactataaacaa 2701
to top
>dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-109-A01, full
            insert sequence
          Length = 2952

 Score =  155 bits (78), Expect = 1e-34
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 305
            |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 2575 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgccttctctcttgcccgt 2516

                                                                        
Query: 306  ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 365
            || || |||||||||||||  || |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2515 ggcgtgcctgactgtgacaatgcaactagaggaggcacagcaccctcttgaagaactata 2456

                                                                        
Query: 366  ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagcgttttctttc 425
            ||||| || ||| |||||||||| |||||||||||||| || || || || ||||| |||
Sbjct: 2455 ctgcaaaatctgctgctgtttgtacatagctgaagcaatgctgcagccgcattttccttc 2396

                          
Query: 426  ccccgcgctgaacc 439
            ||||  ||||||||
Sbjct: 2395 ccccttgctgaacc 2382



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 108  tctcaatttgactataaacaa 128
            |||||||||||||||||||||
Sbjct: 2720 tctcaatttgactataaacaa 2700
to top
>dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082K05, full
            insert sequence
          Length = 2953

 Score =  155 bits (78), Expect = 1e-34
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                        
Query: 246  ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 305
            |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 2576 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgccttctctcttgcccgt 2517

                                                                        
Query: 306  ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 365
            || || |||||||||||||  || |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2516 ggcgtgcctgactgtgacaatgcaactagaggaggcacagcaccctcttgaagaactata 2457

                                                                        
Query: 366  ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagcgttttctttc 425
            ||||| || ||| |||||||||| |||||||||||||| || || || || ||||| |||
Sbjct: 2456 ctgcaaaatctgctgctgtttgtacatagctgaagcaatgctgcagccgcattttccttc 2397

                          
Query: 426  ccccgcgctgaacc 439
            ||||  ||||||||
Sbjct: 2396 ccccttgctgaacc 2383



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 108  tctcaatttgactataaacaa 128
            |||||||||||||||||||||
Sbjct: 2721 tctcaatttgactataaacaa 2701
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  109 bits (55), Expect = 8e-21
 Identities = 127/151 (84%)
 Strand = Plus / Minus

                                                                          
Query: 289    ccttttctcttgctcgcggtgtccctgactgtgacagcgcgactagagggggcacggcac 348
              |||| |||||||| || || || |||||||||||||  || |||||||| ||||| ||||
Sbjct: 550033 ccttctctcttgcccgtggcgtgcctgactgtgacaatgcaactagaggaggcacagcac 549974

                                                                          
Query: 349    cctcttggagaactatgctgcagaacctgttgctgtttgtgcatagctgaagcaacgccg 408
              ||||||| |||||||| ||||| || ||| |||||||||| |||||||||||||| || |
Sbjct: 549973 cctcttgaagaactatactgcaaaatctgctgctgtttgtacatagctgaagcaatgctg 549914

                                             
Query: 409    cggcagcgttttctttcccccgcgctgaacc 439
              | || || ||||| |||||||  ||||||||
Sbjct: 549913 cagccgcattttccttcccccttgctgaacc 549883



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 246    ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgcct 291
              |||||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 550197 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgcct 550152



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 108    tctcaatttgactataaacaa 128
              |||||||||||||||||||||
Sbjct: 550342 tctcaatttgactataaacaa 550322
to top
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0007D08
          Length = 183142

 Score =  109 bits (55), Expect = 8e-21
 Identities = 127/151 (84%)
 Strand = Plus / Minus

                                                                          
Query: 289    ccttttctcttgctcgcggtgtccctgactgtgacagcgcgactagagggggcacggcac 348
              |||| |||||||| || || || |||||||||||||  || |||||||| ||||| ||||
Sbjct: 139993 ccttctctcttgcccgtggcgtgcctgactgtgacaatgcaactagaggaggcacagcac 139934

                                                                          
Query: 349    cctcttggagaactatgctgcagaacctgttgctgtttgtgcatagctgaagcaacgccg 408
              ||||||| |||||||| ||||| || ||| |||||||||| |||||||||||||| || |
Sbjct: 139933 cctcttgaagaactatactgcaaaatctgctgctgtttgtacatagctgaagcaatgctg 139874

                                             
Query: 409    cggcagcgttttctttcccccgcgctgaacc 439
              | || || ||||| |||||||  ||||||||
Sbjct: 139873 cagccgcattttccttcccccttgctgaacc 139843



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 246    ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgcct 291
              |||||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 140157 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgcct 140112



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 108    tctcaatttgactataaacaa 128
              |||||||||||||||||||||
Sbjct: 140302 tctcaatttgactataaacaa 140282
to top
>ref|XM_463544.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2370

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Minus

                                                                        
Query: 262  tgcggaaatagctaagaagagcctgcgccttttctcttgctcgcggtgtccctgactgtg 321
            |||| |||||||| |||||| |||| ||||| |||||||| || | ||| ||||| || |
Sbjct: 2305 tgcgaaaatagcttagaagaacctgagccttctctcttgcacgggctgtgcctgattgcg 2246

                                                                        
Query: 322  acagcgcgactagagggggcacggcaccctcttggagaactatgctgcagaacctgttgc 381
            |||  || || | ||| |||||| | || ||||| ||||| | | |||| |||||||| |
Sbjct: 2245 acaatgcaaccaaaggtggcacgacgccttcttgaagaaccagggtgcaaaacctgttac 2186

                      
Query: 382  tgtttgtgca 391
            ||||||||||
Sbjct: 2185 tgtttgtgca 2176
to top
>dbj|AK072566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134O09, full
            insert sequence
          Length = 2725

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Minus

                                                                        
Query: 262  tgcggaaatagctaagaagagcctgcgccttttctcttgctcgcggtgtccctgactgtg 321
            |||| |||||||| |||||| |||| ||||| |||||||| || | ||| ||||| || |
Sbjct: 2487 tgcgaaaatagcttagaagaacctgagccttctctcttgcacgggctgtgcctgattgcg 2428

                                                                        
Query: 322  acagcgcgactagagggggcacggcaccctcttggagaactatgctgcagaacctgttgc 381
            |||  || || | ||| |||||| | || ||||| ||||| | | |||| |||||||| |
Sbjct: 2427 acaatgcaaccaaaggtggcacgacgccttcttgaagaaccagggtgcaaaacctgttac 2368

                      
Query: 382  tgtttgtgca 391
            ||||||||||
Sbjct: 2367 tgtttgtgca 2358
to top
>gb|AY219234.1| Nicotiana tabacum arm repeat-containing protein mRNA, complete cds
          Length = 2880

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 288  gccttttctcttgctcgcggtgtccctgactgtgacagcgcgactagagggggcacggca 347
            ||||||||||||||||  || || || ||||||||||  || ||||  || || || || 
Sbjct: 2534 gccttttctcttgctcttggggtgccggactgtgacaatgccactaatggaggtacagct 2475

                                                           
Query: 348  ccctcttggagaactatgctgcagaacctgttgctgtttgtgcatag 394
            || || |||||||| ||| ||||||||||| | ||||| ||||||||
Sbjct: 2474 ccttcctggagaaccatgttgcagaacctgctactgttagtgcatag 2428
to top
>gb|AC139575.3| Mus musculus BAC clone RP23-430K5 from 8, complete sequence
          Length = 192317

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 255   ctttggctgcggaaatagctaagaaga 281
             ||||| |||||||||||||||||||||
Sbjct: 44698 ctttgcctgcggaaatagctaagaaga 44672
to top
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 260     gctgcggaaatagctaagaaga 281
               ||||||||||||||||||||||
Sbjct: 1080825 gctgcggaaatagctaagaaga 1080846
to top
>ref|NM_204735.1| Gallus gallus myosin VI (MYO6), mRNA
          Length = 3860

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  ctatgctgcagaacctgttg 380
            ||||||||||||||||||||
Sbjct: 3830 ctatgctgcagaacctgttg 3849
to top
>gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete sequence
          Length = 154772

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    tcaatttgactataaacaaacagt 133
              |||||||||||||||||| |||||
Sbjct: 102045 tcaatttgactataaacagacagt 102022
to top
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence
          Length = 243006

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    ataaacaaacagtacacagc 140
              ||||||||||||||||||||
Sbjct: 102206 ataaacaaacagtacacagc 102225
to top
>emb|CR847897.15| Zebrafish DNA sequence from clone DKEY-90L8 in linkage group 8, complete
              sequence
          Length = 164571

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 378    ttgctgtttgtgcatagctg 397
              ||||||||||||||||||||
Sbjct: 133423 ttgctgtttgtgcatagctg 133442
to top
>emb|AJ278608.1|GGA278608 Gallus gallus mRNA for myosin VI (CMY6 gene)
          Length = 3860

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 361  ctatgctgcagaacctgttg 380
            ||||||||||||||||||||
Sbjct: 3830 ctatgctgcagaacctgttg 3849
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 364     tgctgcagaacctgttgctg 383
               ||||||||||||||||||||
Sbjct: 5518029 tgctgcagaacctgttgctg 5518010
to top
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 380    gctgtttgtgcatagctgaa 399
              ||||||||||||||||||||
Sbjct: 162099 gctgtttgtgcatagctgaa 162118
to top
>gb|AC092438.5| Homo sapiens BAC clone RP11-367M19 from 4, complete sequence
          Length = 67683

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   cagaacctgttgctgtttgt 388
             ||||||||||||||||||||
Sbjct: 21906 cagaacctgttgctgtttgt 21887
to top
>emb|CR385693.1| Gallus gallus finished cDNA, clone ChEST879l11
          Length = 750

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 ctatgctgcagaacctgttg 380
           ||||||||||||||||||||
Sbjct: 28  ctatgctgcagaacctgttg 47
to top
>gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45 of 83 of the complete
             sequence
          Length = 246231

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   tcaatttgactataaacaaacagt 133
             |||||||||||||||||| |||||
Sbjct: 84302 tcaatttgactataaacagacagt 84325
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 364     tgctgcagaacctgttgctg 383
               ||||||||||||||||||||
Sbjct: 2791177 tgctgcagaacctgttgctg 2791158
to top
>gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complete sequence
          Length = 175691

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   ctacaaaactatgatgctaa 212
             ||||||||||||||||||||
Sbjct: 95247 ctacaaaactatgatgctaa 95266
to top
>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence
          Length = 217336

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   ataaacaaacagtacacagc 140
             ||||||||||||||||||||
Sbjct: 45924 ataaacaaacagtacacagc 45905
to top
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 358     gaactatgctgcagaacctg 377
               ||||||||||||||||||||
Sbjct: 2380331 gaactatgctgcagaacctg 2380350
to top
>emb|X54489.1|HSMGSAG Human gene for melanoma growth stimulatory activity (MGSA)
          Length = 1895

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 369 cagaacctgttgctgtttgt 388
           ||||||||||||||||||||
Sbjct: 933 cagaacctgttgctgtttgt 914


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,395,683
Number of Sequences: 3902068
Number of extensions: 3395683
Number of successful extensions: 54889
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54777
Number of HSP's gapped (non-prelim): 111
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top