ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl20b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT024006.1| Zea mays clone EL01N0311H08 mRNA sequence 186 4e-44
2ref|XM_550362.1| Oryza sativa (japonica cultivar-group), mRNA 176 4e-41
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 176 4e-41
4dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 176 4e-41
5dbj|AK099780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
6dbj|AK066230.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
7dbj|AK065529.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
8dbj|AK062042.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
9gb|AY104169.1| Zea mays PCO099315 mRNA sequence 172 6e-40
10ref|XM_475644.1| Oryza sativa (japonica cultivar-group), predic... 170 2e-39
11gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 170 2e-39
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
13dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic D... 88 3e-14
14ref|NM_106656.2| Arabidopsis thaliana SUS2 (ABNORMAL SUSPENSOR 2... 48 0.023
15gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18... 48 0.023
16emb|AL596219.2| Human DNA sequence from clone RP11-659P12 on chr... 44 0.36
17dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
18dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
19gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, com... 40 5.6
20gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 5.6
21emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4,... 40 5.6
22dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
23gb|AC005674.11|AC005674 Homo sapiens chromosome 4 clone RP11-448... 40 5.6
24emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.6
25emb|AL929330.14| Zebrafish DNA sequence from clone CH211-26A17, ... 40 5.6
26gb|AC144936.4| Mus musculus BAC clone RP24-238C11 from 6, comple... 40 5.6
27emb|AL929344.8| Zebrafish DNA sequence from clone DKEYP-115D2, c... 40 5.6 
>gb|BT024006.1| Zea mays clone EL01N0311H08 mRNA sequence
          Length = 1486

 Score =  186 bits (94), Expect = 4e-44
 Identities = 148/166 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  ctacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaa 313
            ||||| ||| ||||||||||| || || ||||| ||||| |||||||| |||||||||||
Sbjct: 1253 ctacgtgaatgtgtcctccctatcaccttcagcgacctctccctcctcgatgttgctgaa 1194

                                                                        
Query: 314  ctccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagctt 373
            ||| ||||||||||| ||||||||||||||||| |||||||| |||||  ||||||||||
Sbjct: 1193 ctcaaggaagtgtgtcggcctgtggtcctcgtgatagaagtcccggggcatgcccagctt 1134

                                                          
Query: 374  catgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
            |||| ||||||||||| | ||||||||||| |||||||||||||||
Sbjct: 1133 catgttgtacttcatctgtgggtcgtgcttcactcccatgaagttg 1088
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>ref|XM_550362.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 7053

 Score =  176 bits (89), Expect = 4e-41
 Identities = 146/165 (88%)
 Strand = Plus / Minus

                                                                        
Query: 255  tacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaac 314
            |||| ||||||||||||||| || || || || ||||||||||| || ||||||||||||
Sbjct: 7052 tacgtgaaggtgtcctccctatcaccttctgcgacctcgccctcgtcgatgttgctgaac 6993

                                                                        
Query: 315  tccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagcttc 374
            || ||||| || || ||||  ||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 6992 tcgaggaaatgcgtcggccgatggtcctcgtgatagaagtcccggggcgtgccaagcttc 6933

                                                         
Query: 375  atgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
            ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6932 atgttgtacttcatcagcgggtcgtgcttgactcccatgaagttg 6888
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  176 bits (89), Expect = 4e-41
 Identities = 146/165 (88%)
 Strand = Plus / Plus

                                                                           
Query: 255     tacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaac 314
               |||| ||||||||||||||| || || || || ||||||||||| || ||||||||||||
Sbjct: 3363176 tacgtgaaggtgtcctccctatcaccttctgcgacctcgccctcgtcgatgttgctgaac 3363235

                                                                           
Query: 315     tccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagcttc 374
               || ||||| || || ||||  ||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 3363236 tcgaggaaatgcgtcggccgatggtcctcgtgatagaagtcccggggcgtgccaagcttc 3363295

                                                            
Query: 375     atgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
               ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3363296 atgttgtacttcatcagcgggtcgtgcttgactcccatgaagttg 3363340
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>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
             P0680A03
          Length = 156054

 Score =  176 bits (89), Expect = 4e-41
 Identities = 146/165 (88%)
 Strand = Plus / Plus

                                                                         
Query: 255   tacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaac 314
             |||| ||||||||||||||| || || || || ||||||||||| || ||||||||||||
Sbjct: 54730 tacgtgaaggtgtcctccctatcaccttctgcgacctcgccctcgtcgatgttgctgaac 54789

                                                                         
Query: 315   tccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagcttc 374
             || ||||| || || ||||  ||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 54790 tcgaggaaatgcgtcggccgatggtcctcgtgatagaagtcccggggcgtgccaagcttc 54849

                                                          
Query: 375   atgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
             ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 54850 atgttgtacttcatcagcgggtcgtgcttgactcccatgaagttg 54894
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>dbj|AK099780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095K10, full
            insert sequence
          Length = 3618

 Score =  176 bits (89), Expect = 4e-41
 Identities = 146/165 (88%)
 Strand = Plus / Minus

                                                                        
Query: 255  tacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaac 314
            |||| ||||||||||||||| || || || || ||||||||||| || ||||||||||||
Sbjct: 3393 tacgtgaaggtgtcctccctatcaccttctgcgacctcgccctcgtcgatgttgctgaac 3334

                                                                        
Query: 315  tccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagcttc 374
            || ||||| || || ||||  ||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 3333 tcgaggaaatgcgtcggccgatggtcctcgtgatagaagtcccggggcgtgccaagcttc 3274

                                                         
Query: 375  atgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
            ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 3273 atgttgtacttcatcagcgggtcgtgcttgactcccatgaagttg 3229
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>dbj|AK066230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057K01, full
            insert sequence
          Length = 2182

 Score =  176 bits (89), Expect = 4e-41
 Identities = 146/165 (88%)
 Strand = Plus / Minus

                                                                        
Query: 255  tacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaac 314
            |||| ||||||||||||||| || || || || ||||||||||| || ||||||||||||
Sbjct: 1909 tacgtgaaggtgtcctccctatcaccttctgcgacctcgccctcgtcgatgttgctgaac 1850

                                                                        
Query: 315  tccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagcttc 374
            || ||||| || || ||||  ||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 1849 tcgaggaaatgcgtcggccgatggtcctcgtgatagaagtcccggggcgtgccaagcttc 1790

                                                         
Query: 375  atgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
            ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1789 atgttgtacttcatcagcgggtcgtgcttgactcccatgaagttg 1745
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>dbj|AK065529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031D19, full
            insert sequence
          Length = 2204

 Score =  176 bits (89), Expect = 4e-41
 Identities = 146/165 (88%)
 Strand = Plus / Minus

                                                                        
Query: 255  tacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaac 314
            |||| ||||||||||||||| || || || || ||||||||||| || ||||||||||||
Sbjct: 1920 tacgtgaaggtgtcctccctatcaccttctgcgacctcgccctcgtcgatgttgctgaac 1861

                                                                        
Query: 315  tccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagcttc 374
            || ||||| || || ||||  ||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 1860 tcgaggaaatgcgtcggccgatggtcctcgtgatagaagtcccggggcgtgccaagcttc 1801

                                                         
Query: 375  atgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
            ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1800 atgttgtacttcatcagcgggtcgtgcttgactcccatgaagttg 1756
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>dbj|AK062042.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A05, full
            insert sequence
          Length = 1339

 Score =  176 bits (89), Expect = 4e-41
 Identities = 146/165 (88%)
 Strand = Plus / Minus

                                                                        
Query: 255  tacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaac 314
            |||| ||||||||||||||| || || || || ||||||||||| || ||||||||||||
Sbjct: 1066 tacgtgaaggtgtcctccctatcaccttctgcgacctcgccctcgtcgatgttgctgaac 1007

                                                                        
Query: 315  tccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagcttc 374
            || ||||| || || ||||  ||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 1006 tcgaggaaatgcgtcggccgatggtcctcgtgatagaagtcccggggcgtgccaagcttc 947

                                                         
Query: 375  atgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
            ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 946  atgttgtacttcatcagcgggtcgtgcttgactcccatgaagttg 902
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>gb|AY104169.1| Zea mays PCO099315 mRNA sequence
          Length = 1640

 Score =  172 bits (87), Expect = 6e-40
 Identities = 148/167 (88%), Gaps = 1/167 (0%)
 Strand = Plus / Minus

                                                                        
Query: 254  ctacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaa 313
            ||||| ||| ||||||||||| || || ||||| ||||| |||||||| |||||||||||
Sbjct: 1407 ctacgtgaatgtgtcctccctatcaccttcagcgacctctccctcctcgatgttgctgaa 1348

                                                                        
Query: 314  ctccaggaagtgtgttggcctgtggtcctcgtggtagaagt-cgcggggtgtgcccagct 372
            ||| ||||||||||| ||||||||||||||||| ||||||| | |||||  |||||||||
Sbjct: 1347 ctcaaggaagtgtgtcggcctgtggtcctcgtgatagaagtccccggggcatgcccagct 1288

                                                           
Query: 373  tcatgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
            ||||| ||||||||||| | ||||||||||| |||||||||||||||
Sbjct: 1287 tcatgttgtacttcatctgtgggtcgtgcttcactcccatgaagttg 1241
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>ref|XM_475644.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 7053

 Score =  170 bits (86), Expect = 2e-39
 Identities = 146/166 (87%)
 Strand = Plus / Minus

                                                                        
Query: 254  ctacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaa 313
            ||||| ||||||||||||||| || || || || ||||||||||| || |||||||||||
Sbjct: 7053 ctacgtgaaggtgtcctccctatcaccttccgcgacctcgccctcgtcgatgttgctgaa 6994

                                                                        
Query: 314  ctccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagctt 373
            ||| ||||| ||||| ||||  ||||||||||| |||||||| | ||| ||||| |||||
Sbjct: 6993 ctcgaggaaatgtgtcggccgatggtcctcgtgatagaagtccctgggcgtgccaagctt 6934

                                                          
Query: 374  catgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
            |||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 6933 catgttgtacttcatcagcgggtcgtgcttcactcccatgaagttg 6888
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>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score =  170 bits (86), Expect = 2e-39
 Identities = 146/166 (87%)
 Strand = Plus / Plus

                                                                         
Query: 254   ctacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaa 313
             ||||| ||||||||||||||| || || || || ||||||||||| || |||||||||||
Sbjct: 66576 ctacgtgaaggtgtcctccctatcaccttccgcgacctcgccctcgtcgatgttgctgaa 66635

                                                                         
Query: 314   ctccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagctt 373
             ||| ||||| ||||| ||||  ||||||||||| |||||||| | ||| ||||| |||||
Sbjct: 66636 ctcgaggaaatgtgtcggccgatggtcctcgtgatagaagtccctgggcgtgccaagctt 66695

                                                           
Query: 374   catgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
             |||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 66696 catgttgtacttcatcagcgggtcgtgcttcactcccatgaagttg 66741
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  170 bits (86), Expect = 2e-39
 Identities = 146/166 (87%)
 Strand = Plus / Plus

                                                                           
Query: 254     ctacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaa 313
               ||||| ||||||||||||||| || || || || ||||||||||| || |||||||||||
Sbjct: 3644229 ctacgtgaaggtgtcctccctatcaccttccgcgacctcgccctcgtcgatgttgctgaa 3644288

                                                                           
Query: 314     ctccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgcccagctt 373
               ||| ||||| ||||| ||||  ||||||||||| |||||||| | ||| ||||| |||||
Sbjct: 3644289 ctcgaggaaatgtgtcggccgatggtcctcgtgatagaagtccctgggcgtgccaagctt 3644348

                                                             
Query: 374     catgctgtacttcatcagcgggtcgtgcttgactcccatgaagttg 419
               |||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3644349 catgttgtacttcatcagcgggtcgtgcttcactcccatgaagttg 3644394
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>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0015I14
          Length = 150650

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                          
Query: 255    tacgagaaggtgtcctccctgtccccctcagcaacctcgccctcctcaatgttgctgaac 314
              |||| ||||||||||||||| || || || || ||||||||||| || ||||||||||||
Sbjct: 150539 tacgtgaaggtgtcctccctatcaccttctgcgacctcgccctcgtcgatgttgctgaac 150598

                                                                  
Query: 315    tccaggaagtgtgttggcctgtggtcctcgtggtagaagtcgcggggtgtgc 366
              || ||||| || || ||||  ||||||||||| |||||||| ||||| ||||
Sbjct: 150599 tcgaggaaatgcgtcggccgatggtcctcgtgatagaagtcccggggcgtgc 150650
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>ref|NM_106656.2| Arabidopsis thaliana SUS2 (ABNORMAL SUSPENSOR 2) AT1G80070 (SUS2)
            mRNA, complete cds
          Length = 7386

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 295  cctcctcaatgttgctgaactccaggaa 322
            ||||||| ||||||||||||||||||||
Sbjct: 7108 cctcctccatgttgctgaactccaggaa 7081
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>gb|AC009322.1|AC009322 Arabidopsis thaliana chromosome I BAC F18B13 genomic sequence, complete
             sequence
          Length = 116905

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 295   cctcctcaatgttgctgaactccaggaa 322
             ||||||| ||||||||||||||||||||
Sbjct: 64297 cctcctccatgttgctgaactccaggaa 64270
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>emb|AL596219.2| Human DNA sequence from clone RP11-659P12 on chromosome 6, complete
             sequence
          Length = 85151

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 307   tgctgaactccaggaagtgtgt 328
             ||||||||||||||||||||||
Sbjct: 78982 tgctgaactccaggaagtgtgt 79003
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 249      tacgactacgagaaggtgtcct 270
                ||||||||||||||||||||||
Sbjct: 23407717 tacgactacgagaaggtgtcct 23407696
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>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0451G12
          Length = 142182

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 249   tacgactacgagaaggtgtcct 270
             ||||||||||||||||||||||
Sbjct: 89554 tacgactacgagaaggtgtcct 89533
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>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence
          Length = 204292

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    agcaaaatgtttcaactgtt 50
             ||||||||||||||||||||
Sbjct: 74940 agcaaaatgtttcaactgtt 74921
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 376     tgctgtacttcatcagcgggtcgt 399
               |||||||||||||||||| |||||
Sbjct: 2923764 tgctgtacttcatcagcgcgtcgt 2923741
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>emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1358B12, complete
             sequence
          Length = 131246

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    gatggcatctacaggccacc 29
             ||||||||||||||||||||
Sbjct: 94309 gatggcatctacaggccacc 94290
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 10       gatggcatctacaggccacc 29
                ||||||||||||||||||||
Sbjct: 23097969 gatggcatctacaggccacc 23097950
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>gb|AC005674.11|AC005674 Homo sapiens chromosome 4 clone RP11-448G15, complete sequence
          Length = 199450

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 317    caggaagtgtgttggcctgtggtc 340
              ||||||| ||||||||||||||||
Sbjct: 108294 caggaagagtgttggcctgtggtc 108317
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>emb|AL512547.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0812A04, complete
             sequence
          Length = 43144

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    gatggcatctacaggccacc 29
             ||||||||||||||||||||
Sbjct: 18892 gatggcatctacaggccacc 18873
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>emb|AL929330.14| Zebrafish DNA sequence from clone CH211-26A17, complete sequence
          Length = 176635

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     aagcaaaatgtttcaactgt 49
              ||||||||||||||||||||
Sbjct: 162247 aagcaaaatgtttcaactgt 162266
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>gb|AC144936.4| Mus musculus BAC clone RP24-238C11 from 6, complete sequence
          Length = 174789

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   gtgtcctccctgtccccctc 283
             ||||||||||||||||||||
Sbjct: 82119 gtgtcctccctgtccccctc 82138
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>emb|AL929344.8| Zebrafish DNA sequence from clone DKEYP-115D2, complete sequence
          Length = 190898

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    aagcaaaatgtttcaactgt 49
             ||||||||||||||||||||
Sbjct: 70823 aagcaaaatgtttcaactgt 70842


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,992,219
Number of Sequences: 3902068
Number of extensions: 2992219
Number of successful extensions: 55478
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55390
Number of HSP's gapped (non-prelim): 87
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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