ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl20a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 98 4e-21
2TNAP2_MOUSE (Q61333) Tumor necrosis factor, alpha-induced protei... 28 6.8

>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 877

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 54/75 (72%), Positives = 54/75 (72%)
 Frame = -3

Query: 400  AQSRTLVISKVVLMGHRSPAAPKKLTVHVNXXXXXXXXXAGTRYQNXXXXXXXXXXXXLS 221
            AQSRTLVISKVVLMGHRSPAAPKKLTVHVN         AGTRYQN            LS
Sbjct: 803  AQSRTLVISKVVLMGHRSPAAPKKLTVHVNSAEVEASSSAGTRYQNAGGLGGVAHIGGLS 862

Query: 220  LVVGEEFELKVAMSY 176
            LVVGEEFELKVAMSY
Sbjct: 863  LVVGEEFELKVAMSY 877



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>TNAP2_MOUSE (Q61333) Tumor necrosis factor, alpha-induced protein 2 (Primary|
           response gene B94 protein)
          Length = 650

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 37  VKSLIIHELAKQ-SCHSTLIFEAIHLALISRLYSINVMVHITNCLNF 174
           +K L++ ELA     +     E +  + + R Y +N+M +I NCL F
Sbjct: 382 IKQLLLVELAALLRSYQRAFDEFLEKSKLLRNYRVNIMANINNCLFF 428


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,296,781
Number of Sequences: 219361
Number of extensions: 602321
Number of successful extensions: 1201
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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