>SMG5_MOUSE (Q6ZPY2) Protein SMG5 (SMG-5 homolog) (EST1-like protein B)|
          Length = 1017

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = -2

Query: 277 PNSI----PCVSGDAELPLSPGAE 218
           PNS+    PCV+GD + PL P +E
Sbjct: 599 PNSVASHRPCVNGDMDKPLEPASE 622

>ACON_BOVIN (P20004) Aconitate hydratase, mitochondrial precursor (EC 4.2.1.3)|
           (Citrate hydro-lyase) (Aconitase)
          Length = 780

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 222 APGERGSSASPLTHGILLGNGTDETSLLQNTLMDRSVKW 338
           APG+      PLT  I   NGT ET LL +T  +  ++W
Sbjct: 733 APGK------PLTCIIKHPNGTQETILLNHTFNETQIEW 765

>EOMES_MOUSE (O54839) Eomesodermin homolog|
          Length = 688

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = -2

Query: 298 DVSSVPFPNSIPCVSGDAELPLSPGAEA 215
           D +S  FP S+PC +G AE P   GA A
Sbjct: 59  DKASKKFPGSLPCQAGSAE-PAGAGAGA 85

>MIAA_DESVH (Q72BV1) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 309

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 242 LSITTHTWNTVREWNR*NIPSPKY 313
           L +  HT  T  EW+R  +P+P+Y
Sbjct: 168 LEVHEHTGRTFSEWHRSAMPAPRY 191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,188,279
Number of Sequences: 219361
Number of extensions: 914062
Number of successful extensions: 1948
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1945
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)