>gb|AC093729.2| Homo sapiens BAC clone RP11-11N6 from 4, complete sequence
          Length = 148616

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 327   agtgtgaaatggttagatcaa 347
             |||||||||||||||||||||
Sbjct: 46596 agtgtgaaatggttagatcaa 46576

>emb|AL929033.7| Mouse DNA sequence from clone RP23-427N17 on chromosome 2, complete
              sequence
          Length = 164571

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 120    tatttttggcccttgttcttg 140
              |||||||||||||||||||||
Sbjct: 160284 tatttttggcccttgttcttg 160304

>gb|AF318392.1| Danio rerio novel immune-type receptor 1i (nitr1i) mRNA, nitr1i-1
           allele, complete cds
          Length = 1008

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tcatatttttggcccttgtt 136
           ||||||||||||||||||||
Sbjct: 824 tcatatttttggcccttgtt 843

>ref|NM_198347.1| Danio rerio novel immune-type receptor 1l (nitr1l), mRNA
          Length = 987

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tcatatttttggcccttgtt 136
           ||||||||||||||||||||
Sbjct: 803 tcatatttttggcccttgtt 822

>emb|Z48717.1|CET10B9 Caenorhabditis elegans Cosmid T10B9, complete sequence
          Length = 34881

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   ccttctccaaaatactttga 318
             ||||||||||||||||||||
Sbjct: 32524 ccttctccaaaatactttga 32505

>gb|AC160106.2| Mus musculus BAC clone RP24-300H23 from chromosome 13, complete sequence
          Length = 184364

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     acagttgacattcctcatga 89
              ||||||||||||||||||||
Sbjct: 121240 acagttgacattcctcatga 121221

>emb|AL611925.27| Human DNA sequence from clone RP11-188C12 on chromosome 9 Contains the
             3' end of the gene for euchromatic histone
             methyltransferase 1 (FLJ12879, KIAA1876) (Eu-HMTase1) and
             five CpG islands, complete sequence
          Length = 90096

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   agctagtttttcatattttt 126
             ||||||||||||||||||||
Sbjct: 76388 agctagtttttcatattttt 76407

>emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chromosome 9q22.1-22.33
              Contains the PTCH gene for patched homolog, a novel gene,
              the gene for a novel protein similar to a metallothionein
              protein (MT1) and three CpG islands, complete sequence
          Length = 189643

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 295    catcccttctccaaaatact 314
              ||||||||||||||||||||
Sbjct: 103334 catcccttctccaaaatact 103353

>emb|AL158032.32| Human DNA sequence from clone RP11-101P17 on chromosome 13 Contains the
             SAP18 gene for sin3-associated polypeptide, 18kD (SAP18p),
             six novel genes, the 3'end of a novel gene, an
             estrogen-related receptor alpha (ESRRA) pseudogene, a
             pseudogene similar to part of mitochondrial intermediate
             peptidase (MIPEP) and five CpG islands, complete sequence
          Length = 172004

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   agctagtttttcatattttt 126
             ||||||||||||||||||||
Sbjct: 29043 agctagtttttcatattttt 29062

>emb|AL591391.5| Zebrafish DNA sequence from clone BUSM1-186F8 in linkage group 7
             Contains the nitr1a_3 gene for novel immune-type receptor
             1a, allele 3, the nitr1c_3 gene for novel immune-type
             receptor 1c, allele 3, the nitr2e_1 gene for novel
             immune-type receptor 2e, allele 1, the nitr1b_2 gene for
             novel immune-ype receptor 1b, allele 2, the nitr2a_3 gene
             for novel immune-type receptor 2a, allele 3, the nitr2b_1
             gene for novel immune-type receptor 2b, allele 1, the
             nitr1f_1 gene for novel immune-type receptor 1f, allele 1,
             a novel immune-type receptor 2c pseudogene, the nitr3d_3
             gene for novel immune-type receptor 3d, allele 3, the
             nitr1h_1 gene for novel immune-type receptor 1h, allele 1,
             the nitr1d_5 gene for novel immune-type receptor 1d,
             allele 5 and two novel immune-type receptor 1 pseudogenes,
             complete sequence
          Length = 97640

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 78398 tcatatttttggcccttgtt 78417

>emb|AL591382.3| Zebrafish DNA sequence from clone BUSM1-105L16 in linkage group 7
             Contains the nitr2d_1 gene for novel immune-type receptor
             2d, allele 1, the nitr1o_3 gene for novel immune-type
             receptor 1o, allele 3, the nitr1m_2 gene for novel
             immune-type receptor 1m, allele 2, the nitr1l_2 gene for
             novel immune-type receptor 1l, allele 2, a novel
             immune-type receptor 1 pseudogene, the nitr5_4 gene for
             novel immune-type receptor 5, allele 4, the nitr4a_2 gene
             for novel immune-type receptor 4a, allele 2, the nitr1i_2
             gene for novel immune-type receptor 1i, allele 2, the
             nitr1j_1 gene for novel immune-type receptor 1j, allele 1,
             the nitr1g_1 gene for novel immune-type receptor 1g,
             allele 1, a novel immune-type receptor 4b pseudogene, a
             novel gene, the nitr1k_3 gene for novel immune-type
             receptor 1k, allele 3 and a CpG island, complete sequence
          Length = 98934

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 50372 tcatatttttggcccttgtt 50353

>emb|AL591497.2| Zebrafish DNA sequence from clone BUSM1-173M20 in linkage group 7
             Contains the nitr1.14, nitr1.17, nitr1.18, nitr2.4,
             nitr2.6, nitr3r.2, nitr1.13, nitr1.15, nitr1.16, nitr2.5,
             nitr3.4 and nitr3r.1 genes for novel immune-type receptors
             and a nitr pseudogene, complete sequence
          Length = 127998

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 55603 tcatatttttggcccttgtt 55584



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 33167 tcatatttttggcccttgtt 33148

>gb|AC106857.8| Homo sapiens chromosome 8, clone RP11-262O21, complete sequence
          Length = 159454

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    agctagtttttcatattttt 126
              ||||||||||||||||||||
Sbjct: 128438 agctagtttttcatattttt 128457

>gb|AC022666.14| Homo sapiens, clone RP11-30K7, complete sequence
          Length = 150721

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   agctagtttttcatattttt 126
             ||||||||||||||||||||
Sbjct: 16505 agctagtttttcatattttt 16486

>ref|NM_063713.1| Caenorhabditis elegans CYtochrome P450 family member (cyp-13A7)
           (cyp-13A7) mRNA, complete cds
          Length = 1557

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 ccttctccaaaatactttga 318
           ||||||||||||||||||||
Sbjct: 754 ccttctccaaaatactttga 735

>ref|NG_004648.1| Danio rerio si:busm1-173m20.17, pseudogene (si:busm1-173m20.17p) on
           chromosome 7
          Length = 1853

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 117 tcatatttttggcccttgtt 136
           ||||||||||||||||||||
Sbjct: 572 tcatatttttggcccttgtt 553

>ref|NM_131646.1| Danio rerio novel immune-type receptor 1i (nitr1i), mRNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tcatatttttggcccttgtt 136
           ||||||||||||||||||||
Sbjct: 824 tcatatttttggcccttgtt 843

>ref|NM_001007292.1| Danio rerio novel immune-type receptor 1f (nitr1f), mRNA
          Length = 1031

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tcatatttttggcccttgtt 136
           ||||||||||||||||||||
Sbjct: 821 tcatatttttggcccttgtt 840

>ref|NM_198350.1| Danio rerio novel immune-type receptor 1c (nitr1c), mRNA
          Length = 1034

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 tcatatttttggcccttgtt 136
           ||||||||||||||||||||
Sbjct: 825 tcatatttttggcccttgtt 844

>gb|AC018758.2|AC018758 Homo sapiens chromosome 19, BAC CTB-61I7 (BC52850), complete sequence
          Length = 185409

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    atcccttctccaaaatactt 315
              ||||||||||||||||||||
Sbjct: 125756 atcccttctccaaaatactt 125775

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 122     tttttggcccttgttcttga 141
               ||||||||||||||||||||
Sbjct: 2021398 tttttggcccttgttcttga 2021417

>emb|AL844870.6| Zebrafish DNA sequence from clone BUSM1-169I8 in linkage group 7,
            complete sequence
          Length = 132503

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 117  tcatatttttggcccttgtt 136
            ||||||||||||||||||||
Sbjct: 2190 tcatatttttggcccttgtt 2171

>emb|AL591405.3| Zebrafish DNA sequence from clone BUSM1-125J23 in linkage group 7,
             complete sequence
          Length = 79994

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 60623 tcatatttttggcccttgtt 60604

>emb|AL591427.2| Zebrafish DNA sequence from clone BUSM1-219H16 in linkage group 7,
             complete sequence
          Length = 126202

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 38322 tcatatttttggcccttgtt 38341

>emb|AL591401.5| Zebrafish DNA sequence from clone BUSM1-175P12 in linkage group 7,
             complete sequence
          Length = 84068

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 69664 tcatatttttggcccttgtt 69683



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 46410 tcatatttttggcccttgtt 46429



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 20276 tcatatttttggcccttgtt 20295

>emb|AL591418.11| Zebrafish DNA sequence from clone BUSM1-139E19 in linkage group 7,
             complete sequence
          Length = 112025

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 83934 tcatatttttggcccttgtt 83953



 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   tcatatttttggcccttgtt 136
             ||||||||||||||||||||
Sbjct: 73560 tcatatttttggcccttgtt 73579

>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 282     ggaacagatgaaacatccct 301
               ||||||||||||||||||||
Sbjct: 1967043 ggaacagatgaaacatccct 1967062


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,911,402
Number of Sequences: 3902068
Number of extensions: 3911402
Number of successful extensions: 81675
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81587
Number of HSP's gapped (non-prelim): 88
length of query: 350
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 328
effective length of database: 17,147,199,772
effective search space: 5624281525216
effective search space used: 5624281525216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)