Clone Name | rbastl20a10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GLGB_PHOPR (Q6LHN1) 1,4-alpha-glucan branching enzyme (EC 2.4.1.... | 30 | 2.7 | 2 | ATX1_PLAFA (Q04956) Probable cation-transporting ATPase 1 (EC 3.... | 28 | 7.7 | 3 | SUHW2_HUMAN (Q86YH2) Suppressor of hairy wing homolog 2 (5'OY11.... | 28 | 7.7 |
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>GLGB_PHOPR (Q6LHN1) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 716 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = +1 Query: 127 AYLHDL*NENVAKLLISSATFLAHLYNIQGLKLNPV 234 +Y++D ++V + LIS+A F Y+I GL+++ V Sbjct: 361 SYIYDYGRDHVRRFLISNALFWLEHYHIDGLRVDAV 396
>ATX1_PLAFA (Q04956) Probable cation-transporting ATPase 1 (EC 3.6.3.-)| Length = 1956 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +1 Query: 73 IFLCLYKRSTCRSRTSLPAYLHDL*NENVAKLLISSATFLAHLYNIQGLKLN 228 I+ CL K+ S+ + Y NE++ K ++ T++ LYNI +K N Sbjct: 319 IYDCLLKKVEAISQKNKIIYS----NEDINKYMLYGGTYVLSLYNINKIKYN 366
>SUHW2_HUMAN (Q86YH2) Suppressor of hairy wing homolog 2 (5'OY11.1) (Zinc finger| protein 632) Length = 543 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = -2 Query: 151 HFTDHAGRQAGWFCFCRCFFCTDKEK*EQDEICYSIF 41 H+ H G+ A CR F T KEK E C+ +F Sbjct: 450 HYRGHWGKSAHQCSKCRLQFLTFKEKMEHKTQCHQMF 486 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,925,423 Number of Sequences: 219361 Number of extensions: 960236 Number of successful extensions: 1802 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1783 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1802 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)