>BMP15_SHEEP (Q9MZE2) Bone morphogenetic protein 15 precursor (BMP-15)|
           (Growth/differentiation factor 9B) (GDF-9B)
          Length = 393

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = -2

Query: 186 HVGSHFWNCKVRGSK*CRSST*LRLFFYCTRLEGKKKVLNLYWHGTA 46
           HVG   WN K R          LRL F C +  G + VL  +WHGT+
Sbjct: 188 HVGQKLWNHKGRRV--------LRLRFVCQQPRGSE-VLEFWWHGTS 225

>MED12_HUMAN (Q93074) Mediator of RNA polymerase II transcription subunit 12|
           (Thyroid hormone receptor-associated protein complex 230
           kDa component) (Trap230) (Activator-recruited cofactor
           240 kDa component) (ARC240) (CAG repeat protein 45)
           (OPA-containin
          Length = 2212

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = +3

Query: 9   QSFCILPTTSLPVPCRANTNSTPFSFLLV 95
           QS   LPTT  P P  ++T STPFS LL+
Sbjct: 358 QSTSTLPTTPAPQPPTSSTPSTPFSDLLM 386

>VE1_BPV4 (P08344) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 608

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 249 GDNSMVDSFRFVSEKKLSSFVHVGSHFWNCKVRGSK 142
           G +  V SF    + K+ SFV+  SHFW   +RG+K
Sbjct: 442 GKSMFVMSFMKALQGKVLSFVNSKSHFWLQPLRGAK 477

>EI2BE_HUMAN (Q13144) Translation initiation factor eIF-2B epsilon subunit|
           (eIF-2B GDP-GTP exchange factor)
          Length = 721

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
 Frame = -3

Query: 329 RHDNGQPDAGGGGAELLPQHPPTPRAAVII--PWWTRFVSFQKKNYLVLFMWVPIFGIVK 156
           R   G   +GGGGA    + PP P  AV++   +  RF    K    VL     +  ++ 
Sbjct: 19  RSGAGPGGSGGGGARGAEEEPPPPLQAVLVADSFDRRFFPISKDQPRVLLPLANV-ALID 77

Query: 155 Y--EVVSDVGVALDYVF 111
           Y  E ++  GV   +VF
Sbjct: 78  YTLEFLTATGVQETFVF 94

>DX26B_HUMAN (Q5JSJ4) Protein DDX26B|
          Length = 861

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +3

Query: 264 RRVLGKELGSSSSRIRLPIIMSWDRTVPDRAPAGENG 374
           +R+L + L S   +++  +++++++T PD  P GE+G
Sbjct: 213 QRMLNQCLESLVQKVQSGVVINFEKTGPDPLPIGEDG 249

>VE1_HPV41 (P27551) Replication protein E1 (EC 3.6.1.-) (ATP-dependent|
           helicase E1)
          Length = 614

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 195 SFVHVGSHFWNCKVRGSK*C 136
           SFV  GSHFW   +RG++ C
Sbjct: 466 SFVSNGSHFWLSPLRGARCC 485

>DDHA_RHOSU (Q8GPG4) Dimethylsulfide dehydrogenase alpha subunit precursor (EC|
           1.8.-.-) (Dimethylsulfide dehydrogenase molybdenum
           subunit) (DMS DH alpha subunit) (DMS DH molybdenum
           subunit)
          Length = 910

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 197 DNFFSETKRNESTMELSPQLGVSEGVGEGARL 292
           + F    +R E  + +SPQL  ++G+ +GA++
Sbjct: 795 NKFMLRLQRGEPNIYISPQLAAAKGIADGAQV 826

>CP2C6_RAT (P05178) Cytochrome P450 2C6 (EC 1.14.14.1) (CYPIIC6) (P450 PB1)|
           (PTF2)
          Length = 490

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 99  YSKKKDVIKCYSYITYYLVLYNSKNGNPHEQ 191
           + +  DV     +I YYL+ +  +N NPH +
Sbjct: 251 HQESLDVTNPRDFIDYYLIKWKQENHNPHSE 281


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,997,679
Number of Sequences: 219361
Number of extensions: 1092104
Number of successful extensions: 3023
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3019
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)