Clone Name	rbastl20a09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY289940.1| Aplysia californica glutamate receptor subunit pr...	44	0.34
2	emb|AL360004.22| Human DNA sequence from clone RP11-88G17 on chr...	42	1.3
3	gb|AC140340.3| Mus musculus BAC clone RP24-260O19 from chromosom...	40	5.3
4	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	40	5.3
5	gb|AC002457.2| Homo sapiens BAC clone CTB-60P12 from 7, complete...	40	5.3
6	gb|AC146054.3| Pan troglodytes BAC clone RP43-78A13 from 7, comp...	40	5.3
7	gb|AC126121.2| Homo sapiens chromosome 3 clone RP11-719N22, comp...	40	5.3
8	gb|AC145816.1| Pan troglodytes BAC clone RP43-6A13 from 7, compl...	40	5.3
9	emb|AL662915.5| Human DNA sequence from clone RP11-350M10 on chr...	40	5.3
10	emb|AL357934.29| Human DNA sequence from clone RP11-565P9 on chr...	40	5.3
11	gb|BC054703.1| Danio rerio cDNA clone IMAGE:2599740, partial cds	40	5.3
12	emb|BX050838.1|CNS09BE2 Single read from an extremity of a full-...	40	5.3
13	emb|BX023711.1|CNS08QGJ Single read from an extremity of a full-...	40	5.3
14	emb|BX548069.7| Zebrafish DNA sequence from clone CH211-238G23 i...	40	5.3
15	emb|BX005414.13| Zebrafish DNA sequence from clone DKEY-21C19 in...	40	5.3
16	gb|AE014181.1| Mus musculus piebald deletion region section 9 of...	40	5.3
17	gb|AC104625.2| Drosophila melanogaster X BAC RP98-48G8 (Roswell ...	40	5.3
18	gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell ...	40	5.3
19	gb|AC010057.7| Drosophila melanogaster 3L BAC RP98-26C18 (Roswel...	40	5.3
20	gb|AE005992.1| Caulobacter crescentus CB15 section 318 of 359 of...	40	5.3
21	ref|XM_687097.1| PREDICTED: Danio rerio similar to SUMO1/sentrin...	40	5.3
22	ref|XM_685599.1| PREDICTED: Danio rerio similar to SUMO1/sentrin...	40	5.3
23	ref|XM_684332.1| PREDICTED: Danio rerio similar to mixed lineage...	40	5.3
24	gb|AC091219.2| Drosophila melanogaster 3L BAC RP98-4C3 (Roswell ...	40	5.3
25	gb|AC161467.2| Gallus gallus BAC clone CH261-89H14 from chromoso...	40	5.3
26	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	40	5.3
27	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	40	5.3
28	emb|BX005387.7| Zebrafish DNA sequence from clone DKEY-97G16 in ...	40	5.3
29	gb|AC084546.1|CBRG30J20 Caenorhabditis briggsae cosmid G30J20, c...	40	5.3
30	gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome...	40	5.3
31	dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge...	40	5.3
32	ref|XM_318933.2| Anopheles gambiae str. PEST ENSANGP00000015878 ...	40	5.3
33	gb|AE003489.2| Drosophila melanogaster chromosome X, section 41 ...	40	5.3
34	gb|AE003469.3| Drosophila melanogaster chromosome 3L, section 3 ...	40	5.3
35	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	40	5.3
36	emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa...	40	5.3
37	gb|AC000402.1|AC000402 Genomic sequence from Human 9q34, complet...	40	5.3
38	emb|CR940308.12| M.truncatula DNA sequence from clone MTH2-17G23...	40	5.3
39	gb|U19511.1|RNU19511 Rattus norvegicus initiation factor-2Be gen...	40	5.3

---

>gb|AY289940.1| Aplysia californica glutamate receptor subunit protein GluR2 mRNA,
           complete cds
          Length = 3592

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 284 gctcggctcctcctcctcccgc 305
           ||||||||||||||||||||||
Sbjct: 393 gctcggctcctcctcctcccgc 414

---

>emb|AL360004.22| Human DNA sequence from clone RP11-88G17 on chromosome 9 Contains the
             3' end of a novel gene, the 3' end of the GPR107 gene for
             G protein-coupled receptor 107 (LUSTR1), the FREQ gene for
             frequenin homolog (Drosophila) (neuronal calcium sensor
             1), the 5' end of a novel pseudogene and two CpG islands,
             complete sequence
          Length = 182211

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    aaattcaacacctttttcttt 85
             |||||||||||||||||||||
Sbjct: 82245 aaattcaacacctttttcttt 82265

---

>gb|AC140340.3| Mus musculus BAC clone RP24-260O19 from chromosome 14, complete sequence
          Length = 168454

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     tttctttccttctagtctag 98
              ||||||||||||||||||||
Sbjct: 130204 tttctttccttctagtctag 130223

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    agctcggctcctcctcctcc 302
              ||||||||||||||||||||
Sbjct: 653018 agctcggctcctcctcctcc 653037

---

>gb|AC002457.2| Homo sapiens BAC clone CTB-60P12 from 7, complete sequence
          Length = 177380

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     acctttttctttccttctag 93
              ||||||||||||||||||||
Sbjct: 154069 acctttttctttccttctag 154050

---

>gb|AC146054.3| Pan troglodytes BAC clone RP43-78A13 from 7, complete sequence
          Length = 155731

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    acctttttctttccttctag 93
             ||||||||||||||||||||
Sbjct: 76267 acctttttctttccttctag 76286

---

>gb|AC126121.2| Homo sapiens chromosome 3 clone RP11-719N22, complete sequence
          Length = 215273

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    ctcggctcctcctcctcccg 304
              ||||||||||||||||||||
Sbjct: 170638 ctcggctcctcctcctcccg 170657

---

>gb|AC145816.1| Pan troglodytes BAC clone RP43-6A13 from 7, complete sequence
          Length = 200683

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    tttttctttccttctagtct 96
             ||||||||||||||||||||
Sbjct: 12365 tttttctttccttctagtct 12346

---

>emb|AL662915.5| Human DNA sequence from clone RP11-350M10 on chromosome 1, complete
             sequence
          Length = 55929

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 279   aaggagctcggctcctcctcctcc 302
             ||||||| ||||||||||||||||
Sbjct: 10637 aaggagcccggctcctcctcctcc 10614

---

>emb|AL357934.29| Human DNA sequence from clone RP11-565P9 on chromosome 9 Contains part
             of the VAV2 gene for vav 2 oncogene, complete sequence
          Length = 95505

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    cacctttttctttccttcta 92
             ||||||||||||||||||||
Sbjct: 77158 cacctttttctttccttcta 77139

---

>gb|BC054703.1| Danio rerio cDNA clone IMAGE:2599740, partial cds
          Length = 2395

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   ttcaacacctttttctttcc 87
            ||||||||||||||||||||
Sbjct: 2136 ttcaacacctttttctttcc 2155

---

>emb|BX050838.1|CNS09BE2 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC27CC11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 908

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 ctcctcctcccgcatcaggt 312
           ||||||||||||||||||||
Sbjct: 244 ctcctcctcccgcatcaggt 225

---

>emb|BX023711.1|CNS08QGJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA36AH03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 706

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 ctcctcctcccgcatcaggt 312
           ||||||||||||||||||||
Sbjct: 263 ctcctcctcccgcatcaggt 244

---

>emb|BX548069.7| Zebrafish DNA sequence from clone CH211-238G23 in linkage group 18,
             complete sequence
          Length = 142514

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    aatacaaattcaacaccttt 79
             ||||||||||||||||||||
Sbjct: 97873 aatacaaattcaacaccttt 97854

---

>emb|BX005414.13| Zebrafish DNA sequence from clone DKEY-21C19 in linkage group 23,
              complete sequence
          Length = 236036

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     ttcaacacctttttctttcc 87
              ||||||||||||||||||||
Sbjct: 203738 ttcaacacctttttctttcc 203719

---

>gb|AE014181.1| Mus musculus piebald deletion region section 9 of 11 of the complete
              sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     tttctttccttctagtctag 98
              ||||||||||||||||||||
Sbjct: 337805 tttctttccttctagtctag 337824

---

>gb|AC104625.2| Drosophila melanogaster X BAC RP98-48G8 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 172105

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   tgaaacgaaacgaaacgagt 230
             ||||||||||||||||||||
Sbjct: 66176 tgaaacgaaacgaaacgagt 66157

---

>gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 153733

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    tgaaacgaaacgaaacgagt 230
              ||||||||||||||||||||
Sbjct: 108670 tgaaacgaaacgaaacgagt 108651

---

>gb|AC010057.7| Drosophila melanogaster 3L BAC RP98-26C18 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 192588

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   gaaacgaaacgaaacgagtc 231
             ||||||||||||||||||||
Sbjct: 17950 gaaacgaaacgaaacgagtc 17969

---

>gb|AE005992.1| Caulobacter crescentus CB15 section 318 of 359 of the complete genome
          Length = 12497

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   ccccgaccgcgcccccgccggcga 367
             ||||||||||||||||| ||||||
Sbjct: 10648 ccccgaccgcgcccccgacggcga 10671

---

>ref|XM_687097.1| PREDICTED: Danio rerio similar to SUMO1/sentrin specific protease 1
            (LOC563740), mRNA
          Length = 3662

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   ttcaacacctttttctttcc 87
            ||||||||||||||||||||
Sbjct: 2130 ttcaacacctttttctttcc 2149

---

>ref|XM_685599.1| PREDICTED: Danio rerio similar to SUMO1/sentrin specific protease 1
            (LOC562201), mRNA
          Length = 3388

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   ttcaacacctttttctttcc 87
            ||||||||||||||||||||
Sbjct: 2131 ttcaacacctttttctttcc 2150

---

>ref|XM_684332.1| PREDICTED: Danio rerio similar to mixed lineage kinase 2
           (LOC560932), mRNA
          Length = 3246

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  aatacaaattcaacaccttt 79
           ||||||||||||||||||||
Sbjct: 121 aatacaaattcaacaccttt 140

---

>gb|AC091219.2| Drosophila melanogaster 3L BAC RP98-4C3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 168047

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   gaaacgaaacgaaacgagtc 231
             ||||||||||||||||||||
Sbjct: 57300 gaaacgaaacgaaacgagtc 57319

---

>gb|AC161467.2| Gallus gallus BAC clone CH261-89H14 from chromosome unknown, complete
            sequence
          Length = 308703

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   aacacctttttctttccttc 90
            ||||||||||||||||||||
Sbjct: 2240 aacacctttttctttccttc 2259

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 351     cgcgcccccgccggcgagaa 370
               ||||||||||||||||||||
Sbjct: 3936534 cgcgcccccgccggcgagaa 3936515

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    agctcggctcctcctcctcc 302
              ||||||||||||||||||||
Sbjct: 653016 agctcggctcctcctcctcc 653035

---

>emb|BX005387.7| Zebrafish DNA sequence from clone DKEY-97G16 in linkage group 7,
             complete sequence
          Length = 152617

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    ttcaacacctttttctttcc 87
             ||||||||||||||||||||
Sbjct: 64187 ttcaacacctttttctttcc 64168

---

>gb|AC084546.1|CBRG30J20 Caenorhabditis briggsae cosmid G30J20, complete sequence
          Length = 35833

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    aattcaacacctttttcttt 85
             ||||||||||||||||||||
Sbjct: 33140 aattcaacacctttttcttt 33159

---

>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0005F16, complete sequence
          Length = 160053

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   agctcggctcctcctcctcc 302
             ||||||||||||||||||||
Sbjct: 38899 agctcggctcctcctcctcc 38918

---

>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 59      caatacaaattcaacacctttttctttc 86
               ||||||||| | ||||||||||||||||
Sbjct: 2492575 caatacaaagttaacacctttttctttc 2492602

---

>ref|XM_318933.2| Anopheles gambiae str. PEST ENSANGP00000015878
           (ENSANGG00000013389), partial mRNA
          Length = 1074

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 293 ctcctcctcccgcatcaggt 312
           ||||||||||||||||||||
Sbjct: 153 ctcctcctcccgcatcaggt 134

---

>gb|AE003489.2| Drosophila melanogaster chromosome X, section 41 of 74 of the complete
              sequence
          Length = 291799

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    tgaaacgaaacgaaacgagt 230
              ||||||||||||||||||||
Sbjct: 242691 tgaaacgaaacgaaacgagt 242710

---

>gb|AE003469.3| Drosophila melanogaster chromosome 3L, section 3 of 83 of the complete
             sequence
          Length = 286515

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   gaaacgaaacgaaacgagtc 231
             ||||||||||||||||||||
Sbjct: 43979 gaaacgaaacgaaacgagtc 43998

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 351     cgcgcccccgccggcgagaa 370
               ||||||||||||||||||||
Sbjct: 3936508 cgcgcccccgccggcgagaa 3936489

---

>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152090

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   cgcgcccccgccggcgagaa 370
             ||||||||||||||||||||
Sbjct: 98510 cgcgcccccgccggcgagaa 98491

---

>gb|AC000402.1|AC000402 Genomic sequence from Human 9q34, complete sequence
          Length = 38258

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    cacctttttctttccttcta 92
             ||||||||||||||||||||
Sbjct: 28925 cacctttttctttccttcta 28944

---

>emb|CR940308.12| M.truncatula DNA sequence from clone MTH2-17G23 on chromosome 3,
             complete sequence
          Length = 121494

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 156   ctttacaattccaaaaatgg 175
             ||||||||||||||||||||
Sbjct: 15549 ctttacaattccaaaaatgg 15568

---

>gb|U19511.1|RNU19511 Rattus norvegicus initiation factor-2Be gene, complete cds
          Length = 13164

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   gctcggctcctcctcctccc 303
             ||||||||||||||||||||
Sbjct: 10902 gctcggctcctcctcctccc 10921


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,103,411
Number of Sequences: 3902068
Number of extensions: 4103411
Number of successful extensions: 118071
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117636
Number of HSP's gapped (non-prelim): 435
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---