>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 155    tgccagctcagtcggtatcaagtgaacaaa 184
              ||||| |||||||| |||||||||||||||
Sbjct: 406199 tgccaactcagtcgttatcaagtgaacaaa 406228



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 349    cttgatcaactttgaacagagtag 372
              ||||||||||||||||| ||||||
Sbjct: 891917 cttgatcaactttgaactgagtag 891940

>emb|BX511062.12| Zebrafish DNA sequence from clone CH211-266M11 in linkage group 17,
             complete sequence
          Length = 131970

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 396   acaattcttctgccagacttgtcatt 421
             ||||||||||||||||| ||||||||
Sbjct: 92238 acaattcttctgccagatttgtcatt 92263

>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 155    tgccagctcagtcggtatcaagtgaacaaa 184
              ||||| |||||||| |||||||||||||||
Sbjct: 789311 tgccaactcagtcgttatcaagtgaacaaa 789282



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 349    cttgatcaactttgaacagagtag 372
              ||||||||||||||||| ||||||
Sbjct: 219713 cttgatcaactttgaactgagtag 219690

>gb|AC110781.3| Homo sapiens BAC clone RP11-383A19 from 7, complete sequence
          Length = 44985

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 21    aacattactatgatatacaaat 42
             ||||||||||||||||||||||
Sbjct: 35369 aacattactatgatatacaaat 35390

>dbj|AP000344.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1269D1
          Length = 186421

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 21     aacattactatgatatacaaat 42
              ||||||||||||||||||||||
Sbjct: 118357 aacattactatgatatacaaat 118336

>emb|AL159977.10| Human DNA sequence from clone RP11-428O18 on chromosome 13 Contains the
              RPL21 gene for ribosomal protein L21 (60S ribosomal protein
              L21, L21), a novel gene for a Ras family protein similar to
              1110065D03RIK, a novel gene, the 5' end of novel gene and
              two CpG islands, complete sequence
          Length = 173965

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     atgatatacaaatgtttctgt 50
              |||||||||||||||||||||
Sbjct: 160311 atgatatacaaatgtttctgt 160331

>emb|AL049746.1|ATT23J7 Arabidopsis thaliana DNA chromosome 3, BAC clone T23J7
          Length = 92493

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 375   tatttctttctctttaccttg 395
             |||||||||||||||||||||
Sbjct: 82513 tatttctttctctttaccttg 82533

>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 160001

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     agtttacttaatcaacaaaaa 100
              |||||||||||||||||||||
Sbjct: 158325 agtttacttaatcaacaaaaa 158345

>gb|AC023682.4| Drosophila melanogaster X BAC RP98-7F10 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179236

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 80    agtttacttaatcaacaaaaa 100
             |||||||||||||||||||||
Sbjct: 41601 agtttacttaatcaacaaaaa 41621

>gb|AF001355.2|PSAF001355 Pseudomonas syringae pv. syringae DNA binding protein HpkR (hpkR),
           hybrid histidine protein kinase-phosphate acceptor
           regulatory protein CvgSY (cvgSY), ankyrin AnkF (ankF),
           and catalase isozyme catalytic subunit CatF (catF)
           genes, complete cds
          Length = 6917

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 207 tcaccagaagccctggaagcc 227
           |||||||||||||||||||||
Sbjct: 630 tcaccagaagccctggaagcc 650

>gb|AE003436.3| Drosophila melanogaster chromosome X, section 20 of 74 of the complete
              sequence
          Length = 317322

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     agtttacttaatcaacaaaaa 100
              |||||||||||||||||||||
Sbjct: 235032 agtttacttaatcaacaaaaa 235012

>gb|AC160110.2| Mus musculus BAC clone RP24-142M20 from chromosome 9, complete sequence
          Length = 189619

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   tagcctatttctttctcttt 389
             ||||||||||||||||||||
Sbjct: 80721 tagcctatttctttctcttt 80702

>gb|AC124977.8| Mus musculus chromosome 7, clone RP24-89J20, complete sequence
          Length = 239915

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    cataggtactgtgccaaaaa 139
              ||||||||||||||||||||
Sbjct: 130412 cataggtactgtgccaaaaa 130393

>ref|XM_602426.2| PREDICTED: Bos taurus similar to zinc finger protein 354A,
           transcript variant 1 (LOC524106), mRNA
          Length = 2152

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 77  ttcagtttacttaatcaacaaaaa 100
           ||||||||| ||||||||||||||
Sbjct: 855 ttcagtttatttaatcaacaaaaa 878

>gb|AC147091.2| Pan troglodytes BAC clone RP43-57O16 from 7, complete sequence
          Length = 170233

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   ctgcaagttctgaacctctt 351
             ||||||||||||||||||||
Sbjct: 23023 ctgcaagttctgaacctctt 23042

>gb|AC125268.10| Mus musculus chromosome 1, clone RP23-127L7, complete sequence
          Length = 233529

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   tctttctctttaccttgaca 398
             ||||||||||||||||||||
Sbjct: 29744 tctttctctttaccttgaca 29763

>gb|AC002433.2| Homo sapiens BAC clone CTA-317M2 from 7, complete sequence
          Length = 139919

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   ctgcaagttctgaacctctt 351
             ||||||||||||||||||||
Sbjct: 56747 ctgcaagttctgaacctctt 56728

>gb|AY524043.1| Micromonospora echinospora ATCC 15835 gentamicin biosynthesis gene
             cluster, complete sequence
          Length = 38146

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 201   cgccgatcaccagaagccctggaagcca 228
             |||||||||||||||||  |||||||||
Sbjct: 17574 cgccgatcaccagaagctgtggaagcca 17601

>gb|AC140294.3| Mus musculus BAC clone RP23-359G16 from chromosome 19, complete
             sequence
          Length = 190551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    ttacttaatcaacaaaaata 102
             ||||||||||||||||||||
Sbjct: 51643 ttacttaatcaacaaaaata 51662

>emb|Z66497.1|CEK08F8 Caenorhabditis elegans Cosmid K08F8, complete sequence
          Length = 41246

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  ttctctttaccttgacaatt 401
            ||||||||||||||||||||
Sbjct: 3702 ttctctttaccttgacaatt 3683

>gb|AC145920.1| Pan troglodytes BAC clone RP43-10C15 from 7, complete sequence
          Length = 188373

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    ctgcaagttctgaacctctt 351
              ||||||||||||||||||||
Sbjct: 111935 ctgcaagttctgaacctctt 111916

>emb|AL158166.13| Human DNA sequence from clone RP11-4C20 on chromosome 10 Contains the
             gene for a novel protein (MGC32871), the 5' end of the
             PTPRE gene for protein tyrosine phosphatase receptor type
             E, two novel genes and a CpG island, complete sequence
          Length = 111852

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ataccctgaaacattactat 31
             ||||||||||||||||||||
Sbjct: 82582 ataccctgaaacattactat 82601

>emb|AJ575934.2|MPU575934 Micromonospora purpurea DOS biosynthetic gene cluster
          Length = 32668

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 201   cgccgatcaccagaagccctggaagcca 228
             |||||||||||||||||  |||||||||
Sbjct: 18928 cgccgatcaccagaagctgtggaagcca 18901

>gb|AC096645.2| Homo sapiens chromosome 1 clone RP11-450D21, complete sequence
          Length = 167878

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   cagaagccctggaagccaag 230
             ||||||||||||||||||||
Sbjct: 67106 cagaagccctggaagccaag 67125

>emb|BX088648.9| Mouse DNA sequence from clone RP23-156M16 on chromosome 11, complete
             sequence
          Length = 199838

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   tagcctatttctttctcttt 389
             ||||||||||||||||||||
Sbjct: 81301 tagcctatttctttctcttt 81282

>emb|BX927184.5| Zebrafish DNA sequence from clone DKEY-125I20 in linkage group 5,
             complete sequence
          Length = 160345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    gggaatagacaaaattcagtttac 86
             |||||||||||||||||| |||||
Sbjct: 40674 gggaatagacaaaattcattttac 40651

>gb|AC091784.8| Genomic sequence for Mus musculus, clone RP23-213D23, complete sequence
          Length = 215410

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 210    ccagaagccctggaagccaa 229
              ||||||||||||||||||||
Sbjct: 155198 ccagaagccctggaagccaa 155217

>emb|BX324205.5| Zebrafish DNA sequence from clone CH211-10K1 in linkage group 14,
             complete sequence
          Length = 168546

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 375   tatttctttctctttaccttgaca 398
             ||||||||| ||||||||||||||
Sbjct: 21444 tatttctttgtctttaccttgaca 21467

>gb|AC108443.18| Mus musculus chromosome 7, clone RP23-13J9, complete sequence
          Length = 198138

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   cataggtactgtgccaaaaa 139
             ||||||||||||||||||||
Sbjct: 49409 cataggtactgtgccaaaaa 49390

>gb|AF115855.1|AF115855 Caiman crocodilus alpha enolase mRNA, partial cds
          Length = 1120

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 410 agacttgtcattgtcacgga 429
           ||||||||||||||||||||
Sbjct: 109 agacttgtcattgtcacgga 90

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 385     tctttaccttgacaattctt 404
               ||||||||||||||||||||
Sbjct: 1115724 tctttaccttgacaattctt 1115743

>emb|AJ628149.4| Micromonospora echinospora genomic region of the gentamicin
             biosynthesis gene cluster, strain DSM 43036
          Length = 84222

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 201   cgccgatcaccagaagccctggaagcca 228
             |||||||||||||||||  |||||||||
Sbjct: 29818 cgccgatcaccagaagctgtggaagcca 29845

>emb|AL671299.18| Mouse DNA sequence from clone RP23-281K21 on chromosome X, complete
              sequence
          Length = 214997

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    ccagaagccctggaagccaa 229
              ||||||||||||||||||||
Sbjct: 210536 ccagaagccctggaagccaa 210517

>gb|AC069561.37| Mus musculus strain C57BL/6J chromosome 9 clone rp23-263o15, complete
              sequence
          Length = 201162

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 370    tagcctatttctttctcttt 389
              ||||||||||||||||||||
Sbjct: 143792 tagcctatttctttctcttt 143773


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,954,002
Number of Sequences: 3902068
Number of extensions: 4954002
Number of successful extensions: 103549
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103444
Number of HSP's gapped (non-prelim): 105
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)