ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl20a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 163 6e-37
2gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 163 6e-37
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 6e-37
4dbj|AK101339.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 6e-37
5dbj|AB057787.1| Oryza sativa OsCR4 gene, complete cds 163 6e-37
6ref|XM_468998.1| Oryza sativa (japonica cultivar-group), mRNA 139 9e-30
7gb|AY110360.1| Zea mays CL2011_1 mRNA sequence 117 3e-23
8gb|U67422.1|ZMU67422 Zea mays CRINKLY4 precursor (cr4) mRNA, com... 117 3e-23
9gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence 60 7e-06
10gb|AC010623.10| Homo sapiens chromosome 5 clone CTD-2093G19, com... 44 0.39
11gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome... 42 1.6
12gb|AC009393.5| Drosophila melanogaster clone BACR17F05, complete... 42 1.6
13gb|AC018479.2|AC018479 Drosophila melanogaster, chromosome 3R, r... 42 1.6
14gb|AE003697.4| Drosophila melanogaster chromosome 3R, section 35... 42 1.6
15ref|NM_112562.3| Arabidopsis thaliana unknown protein AT3G16860 ... 40 6.1
16emb|AJ781197.1| Influenza B virus (B/Hong Kong/330/01) partial P... 40 6.1
17emb|AJ781196.1| Influenza B virus (B/Trieste/28/02) partial PB2 ... 40 6.1
18emb|AJ781192.1| Influenza B virus (B/Sichuan/379/99) partial PB2... 40 6.1
19emb|Z75889.1|HS267P19 Human DNA sequence from clone RP1-267P19 o... 40 6.1
20emb|AL138781.13| Human DNA sequence from clone RP11-83N9 on chro... 40 6.1
21emb|AL049861.18|HSBK21C21 Human DNA sequence from clone CTA-21C2... 40 6.1
22gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosom... 40 6.1
23gb|AY506866.1| Clavispora lusitaniae purine-cytosine permease (F... 40 6.1
24gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complet... 40 6.1
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
26emb|BX823830.1|CNS0A7F9 Arabidopsis thaliana Full-length cDNA Co... 40 6.1
27gb|AC068196.4| Homo sapiens BAC clone RP11-685J19 from 2, comple... 40 6.1
28dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
29dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
30gb|AY504607.1| Influenza B virus (B/Hong Kong/330/2001) basic po... 40 6.1
31gb|AY377788.1| Leishmania donovani promastigote IFN-gamma releas... 40 6.1
32gb|AY504615.1| Influenza B virus (B/Hong Kong/330/2001 egg adapt... 40 6.1
33dbj|AP001308.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 6.1
34emb|Y14424.1|ATSEB2 Arabidopsis thaliana mRNA for hypothetical p... 40 6.1
35emb|AL353724.11| Human DNA sequence from clone RP11-448I13 on ch... 40 6.1
36emb|AL731706.14| Mouse DNA sequence from clone RP23-199B10 on ch... 40 6.1
37gb|AC102860.13| Mus musculus chromosome 3, clone RP24-511H12, co... 40 6.1 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  163 bits (82), Expect = 6e-37
 Identities = 142/162 (87%)
 Strand = Plus / Minus

                                                                            
Query: 280      ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctgtgg 339
                |||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 24307141 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 24307082

                                                                            
Query: 340      agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 399
                 || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 24307081 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 24307022

                                                          
Query: 400      attcctcccatctgtggttgttcggccatccaggtcggcttc 441
                 ||||| ||||||||||||||||| ||||||| ||| |||||
Sbjct: 24307021 gttccttccatctgtggttgttcgtccatccatgtcagcttc 24306980



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 148      aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
                ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 24307331 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 24307289
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>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score =  163 bits (82), Expect = 6e-37
 Identities = 142/162 (87%)
 Strand = Plus / Plus

                                                                         
Query: 280   ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctgtgg 339
             |||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 73483 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 73542

                                                                         
Query: 340   agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 399
              || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 73543 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 73602

                                                       
Query: 400   attcctcccatctgtggttgttcggccatccaggtcggcttc 441
              ||||| ||||||||||||||||| ||||||| ||| |||||
Sbjct: 73603 gttccttccatctgtggttgttcgtccatccatgtcagcttc 73644



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 148   aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
             ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 73293 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 73335
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  163 bits (82), Expect = 6e-37
 Identities = 142/162 (87%)
 Strand = Plus / Minus

                                                                            
Query: 280      ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctgtgg 339
                |||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 24224610 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 24224551

                                                                            
Query: 340      agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 399
                 || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 24224550 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 24224491

                                                          
Query: 400      attcctcccatctgtggttgttcggccatccaggtcggcttc 441
                 ||||| ||||||||||||||||| ||||||| ||| |||||
Sbjct: 24224490 gttccttccatctgtggttgttcgtccatccatgtcagcttc 24224449



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 148      aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
                ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 24224800 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 24224758
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>dbj|AK101339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J17, full
            insert sequence
          Length = 3772

 Score =  163 bits (82), Expect = 6e-37
 Identities = 142/162 (87%)
 Strand = Plus / Minus

                                                                        
Query: 280  ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctgtgg 339
            |||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 3406 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 3347

                                                                        
Query: 340  agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 399
             || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 3346 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 3287

                                                      
Query: 400  attcctcccatctgtggttgttcggccatccaggtcggcttc 441
             ||||| ||||||||||||||||| ||||||| ||| |||||
Sbjct: 3286 gttccttccatctgtggttgttcgtccatccatgtcagcttc 3245



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 148  aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
            ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 3596 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 3554
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>dbj|AB057787.1| Oryza sativa OsCR4 gene, complete cds
          Length = 3859

 Score =  163 bits (82), Expect = 6e-37
 Identities = 142/162 (87%)
 Strand = Plus / Minus

                                                                        
Query: 280  ttttcagctgatcttggcatttcatcagaagttgtgctgcaagtacaggttctcctgtgg 339
            |||||| ||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 3534 ttttcaactgttcttgacatttcatcagaagttgtgctgcaagtacaggttttcctgcgg 3475

                                                                        
Query: 340  agacgccggcccaatctcttcctccagtgaccgcagaccatctcctatgctgctcccgac 399
             || ||||| | ||| ||||||||||| |||||||  ||||| |||||||||||||| ||
Sbjct: 3474 tgaggccgggctaatttcttcctccagcgaccgcaatccatcacctatgctgctcccaac 3415

                                                      
Query: 400  attcctcccatctgtggttgttcggccatccaggtcggcttc 441
             ||||| ||||||||||||||||| ||||||| ||| |||||
Sbjct: 3414 gttccttccatctgtggttgttcgtccatccatgtcagcttc 3373



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 148  aatctacaaagaaatgcctccagatgctaaaaatccttccagt 190
            ||||||||||||||||||||| | |||||||| | ||||||||
Sbjct: 3724 aatctacaaagaaatgcctccggctgctaaaatttcttccagt 3682
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>ref|XM_468998.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2706

 Score =  139 bits (70), Expect = 9e-30
 Identities = 121/138 (87%)
 Strand = Plus / Minus

                                                                        
Query: 304  tcagaagttgtgctgcaagtacaggttctcctgtggagacgccggcccaatctcttcctc 363
            ||||||||||||||||||||||||||| ||||| || || ||||| | ||| ||||||||
Sbjct: 2706 tcagaagttgtgctgcaagtacaggttttcctgcggtgaggccgggctaatttcttcctc 2647

                                                                        
Query: 364  cagtgaccgcagaccatctcctatgctgctcccgacattcctcccatctgtggttgttcg 423
            ||| |||||||  ||||| |||||||||||||| || ||||| |||||||||||||||||
Sbjct: 2646 cagcgaccgcaatccatcacctatgctgctcccaacgttccttccatctgtggttgttcg 2587

                              
Query: 424  gccatccaggtcggcttc 441
             ||||||| ||| |||||
Sbjct: 2586 tccatccatgtcagcttc 2569
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>gb|AY110360.1| Zea mays CL2011_1 mRNA sequence
          Length = 3324

 Score =  117 bits (59), Expect = 3e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                        
Query: 298  atttcatcagaagttgtgctgcaagtacaggttctcctgtggagacgccggcccaatctc 357
            ||||| |||||||||||||||||||||||||||||| ||||| || || ||  | || ||
Sbjct: 2868 atttcttcagaagttgtgctgcaagtacaggttctcttgtggtgaagctggagcgatttc 2809

                                                                       
Query: 358  ttcctccagtgaccgcagaccatctcctatgctgctcccgacattcctcccatctgtgg 416
            |||||||||||||||||| || || ||||||||||||||||| ||||| || |||||||
Sbjct: 2808 ttcctccagtgaccgcagtccgtcacctatgctgctcccgacgttcctgccgtctgtgg 2750
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>gb|U67422.1|ZMU67422 Zea mays CRINKLY4 precursor (cr4) mRNA, complete cds
          Length = 3346

 Score =  117 bits (59), Expect = 3e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                        
Query: 298  atttcatcagaagttgtgctgcaagtacaggttctcctgtggagacgccggcccaatctc 357
            ||||| |||||||||||||||||||||||||||||| ||||| || || ||  | || ||
Sbjct: 2868 atttcttcagaagttgtgctgcaagtacaggttctcttgtggtgaagctggagcgatttc 2809

                                                                       
Query: 358  ttcctccagtgaccgcagaccatctcctatgctgctcccgacattcctcccatctgtgg 416
            |||||||||||||||||| || || ||||||||||||||||| ||||| || |||||||
Sbjct: 2808 ttcctccagtgaccgcagtccgtcacctatgctgctcccgacgttcctgccgtctgtgg 2750
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>gb|AY484589.1| Musa acuminata clone MuH9, genomic sequence
          Length = 82723

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                         
Query: 304   tcagaagttgtgctgcaagtacaggttctcctgtggagacgccggcccaatctcttcctc 363
             |||||||||||| |||||| |||| ||||||||||| || || || || |||||||||||
Sbjct: 38972 tcagaagttgtgttgcaagaacagattctcctgtggggatgctggtccgatctcttcctc 39031

               
Query: 364   ca 365
             ||
Sbjct: 39032 ca 39033
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>gb|AC010623.10| Homo sapiens chromosome 5 clone CTD-2093G19, complete sequence
          Length = 122505

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 297   catttcatcagaagttgtgctg 318
             ||||||||||||||||||||||
Sbjct: 43055 catttcatcagaagttgtgctg 43076
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>gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome 8, complete sequence
          Length = 205525

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 349    cccaatctcttcctccagtga 369
              |||||||||||||||||||||
Sbjct: 123611 cccaatctcttcctccagtga 123631
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>gb|AC009393.5| Drosophila melanogaster clone BACR17F05, complete sequence
          Length = 198037

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 21    ttgcagggaaaccaacaacagaaag 45
             |||||||| ||||||||||||||||
Sbjct: 22317 ttgcagggcaaccaacaacagaaag 22341
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>gb|AC018479.2|AC018479 Drosophila melanogaster, chromosome 3R, region 87D-87D, BAC clone
              BACR09O13, complete sequence
          Length = 174677

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 21     ttgcagggaaaccaacaacagaaag 45
              |||||||| ||||||||||||||||
Sbjct: 151921 ttgcagggcaaccaacaacagaaag 151945
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>gb|AE003697.4| Drosophila melanogaster chromosome 3R, section 35 of 118 of the complete
              sequence
          Length = 221239

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 21     ttgcagggaaaccaacaacagaaag 45
              |||||||| ||||||||||||||||
Sbjct: 163610 ttgcagggcaaccaacaacagaaag 163634
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>ref|NM_112562.3| Arabidopsis thaliana unknown protein AT3G16860 mRNA, complete cds
          Length = 2361

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  agaagttgtgctgcaagtac 325
            ||||||||||||||||||||
Sbjct: 1475 agaagttgtgctgcaagtac 1456
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>emb|AJ781197.1| Influenza B virus (B/Hong Kong/330/01) partial PB2 gene for
           polymerase 2, genomic RNA, isolate B/Hong Kong/330/01
          Length = 2319

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 468 caaagaaatgcctccagatg 487
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>emb|AJ781196.1| Influenza B virus (B/Trieste/28/02) partial PB2 gene for polymerase
           2, genomic RNA, isolate B/Trieste/28/02
          Length = 2298

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 447 caaagaaatgcctccagatg 466
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>emb|AJ781192.1| Influenza B virus (B/Sichuan/379/99) partial PB2 gene for
           polymerase 2, genomic RNA, isolate B/Sichuan/379/99
          Length = 2319

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 468 caaagaaatgcctccagatg 487
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>emb|Z75889.1|HS267P19 Human DNA sequence from clone RP1-267P19 on chromosome 13 Contains part
             of the gene for androgen-induced prostate proliferative
             shutoff associated protein (AS3) (CG008, FLJ23236,
             KIAA0979) and two CpG islands, complete sequence
          Length = 113704

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    caacaacagaaagacaacta 52
             ||||||||||||||||||||
Sbjct: 91568 caacaacagaaagacaacta 91549
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>emb|AL138781.13| Human DNA sequence from clone RP11-83N9 on chromosome 9p34.1-35.1
             Contains a novel gene (LOC90120), the LHX3 gene for LIM
             homeobox protein 3, the gene for a novel protein
             (DKFZp762A2013) similar to quiescin proteins and seven CpG
             islands, complete sequence
          Length = 154918

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 399   cattcctcccatctgtggtt 418
             ||||||||||||||||||||
Sbjct: 82665 cattcctcccatctgtggtt 82684
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>emb|AL049861.18|HSBK21C21 Human DNA sequence from clone CTA-21C21 on chromosome 1p22.2-31.1
             Contains STSs and GSSs, complete sequence
          Length = 143163

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   attccacttataaatacaag 123
             ||||||||||||||||||||
Sbjct: 65126 attccacttataaatacaag 65107
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>gb|AC161258.2| Mus musculus BAC clone RP23-457H24 from chromosome 17, complete sequence
          Length = 201842

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tacaaagaaatgcctccaga 171
              ||||||||||||||||||||
Sbjct: 100627 tacaaagaaatgcctccaga 100608
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>gb|AY506866.1| Clavispora lusitaniae purine-cytosine permease (FCY2) gene, complete
            cds
          Length = 1968

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 402  tcctcccatctgtggttgtt 421
            ||||||||||||||||||||
Sbjct: 1256 tcctcccatctgtggttgtt 1237
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>gb|AC104819.4| Homo sapiens BAC clone RP11-731D1 from 4, complete sequence
          Length = 129203

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   ccaaagcaacaggtcacaaa 247
             ||||||||||||||||||||
Sbjct: 93753 ccaaagcaacaggtcacaaa 93772
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 145      atcaatctacaaagaaatgc 164
                ||||||||||||||||||||
Sbjct: 26177782 atcaatctacaaagaaatgc 26177763
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>emb|BX823830.1|CNS0A7F9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS80ZD01 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2270

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 306  agaagttgtgctgcaagtac 325
            ||||||||||||||||||||
Sbjct: 1474 agaagttgtgctgcaagtac 1455
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>gb|AC068196.4| Homo sapiens BAC clone RP11-685J19 from 2, complete sequence
          Length = 162566

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 155    aaagaaatgcctccagatgctaaaaatc 182
              |||||||||||||| |||| ||||||||
Sbjct: 115825 aaagaaatgcctcctgatgttaaaaatc 115852
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>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0048B08
          Length = 146874

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   atcaatctacaaagaaatgc 164
             ||||||||||||||||||||
Sbjct: 74609 atcaatctacaaagaaatgc 74590
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>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           BAC clone:OSJNBb0012J10
          Length = 132375

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 atcaatctacaaagaaatgc 164
           ||||||||||||||||||||
Sbjct: 623 atcaatctacaaagaaatgc 604
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>gb|AY504607.1| Influenza B virus (B/Hong Kong/330/2001) basic polymerase subunit 2
           (PB2) gene, complete cds
          Length = 2396

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 482 caaagaaatgcctccagatg 501
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>gb|AY377788.1| Leishmania donovani promastigote IFN-gamma release-inducing antigen,
            complete sequence
          Length = 1953

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 25   agggaaaccaacaacagaaagaca 48
            ||||||| ||||||||||||||||
Sbjct: 1295 agggaaaacaacaacagaaagaca 1318
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>gb|AY504615.1| Influenza B virus (B/Hong Kong/330/2001 egg adapted) basic
           polymerase subunit 2 (PB2) gene, complete cds
          Length = 2396

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 154 caaagaaatgcctccagatg 173
           ||||||||||||||||||||
Sbjct: 482 caaagaaatgcctccagatg 501
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>dbj|AP001308.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUH15
          Length = 11291

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  agaagttgtgctgcaagtac 325
            ||||||||||||||||||||
Sbjct: 3352 agaagttgtgctgcaagtac 3371
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>emb|Y14424.1|ATSEB2 Arabidopsis thaliana mRNA for hypothetical protein SEB2, partial
          Length = 1244

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 agaagttgtgctgcaagtac 325
           ||||||||||||||||||||
Sbjct: 382 agaagttgtgctgcaagtac 363
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>emb|AL353724.11| Human DNA sequence from clone RP11-448I13 on chromosome 13, complete
              sequence
          Length = 120652

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     caacaacagaaagacaacta 52
              ||||||||||||||||||||
Sbjct: 110707 caacaacagaaagacaacta 110688
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>emb|AL731706.14| Mouse DNA sequence from clone RP23-199B10 on chromosome 2, complete
              sequence
          Length = 195301

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     atcaactgtggccattccac 110
              ||||||||||||||||||||
Sbjct: 146227 atcaactgtggccattccac 146208
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>gb|AC102860.13| Mus musculus chromosome 3, clone RP24-511H12, complete sequence
          Length = 202315

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 306   agaagttgtgctgcaagtacaggt 329
             ||||||||||||| ||||||||||
Sbjct: 72030 agaagttgtgctgaaagtacaggt 72053


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,059,630
Number of Sequences: 3902068
Number of extensions: 4059630
Number of successful extensions: 76964
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76840
Number of HSP's gapped (non-prelim): 122
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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