>MFRP_MOUSE (Q8K480) Membrane frizzled-related protein (Membrane-type|
           frizzled-related protein)
          Length = 584

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 142 HSPSCGCIIPPPDGYISMTDCPCMYPVVTCAV 47
           H  +CG ++P P G+ S  + P +YP ++  V
Sbjct: 146 HQTTCGGLLPGPSGFFSSPNYPDLYPPLSHCV 177

>TAT_CAEVG (P21125) Trans-activating transcriptional regulatory protein|
           (Protein S)
          Length = 87

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = -1

Query: 212 EKFHWLGSSLTVPRMEIIN----FLEQAFSFVRVYNTPA*WLYIHDRLSVYVPC-CNLCS 48
           E+  W  +S+ VP  EI+      L    +  +VY     W+ IH +  V  PC C LC+
Sbjct: 24  ERDTWQWTSIRVPE-EILQRWLAMLRSGRNRNKVYREMQKWMSIHPKAPVIRPCGCRLCN 82

Query: 47  DG 42
            G
Sbjct: 83  PG 84

>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 378 RQMLLDFARKSMPVIGYNHSGASGGRPASEPVPG 277
           R++   FA KS P  G     A+  RP ++P PG
Sbjct: 45  RRLRESFASKSAPANGAKPGPAASARPGAKPTPG 78

>POLN_ONNVS (O90368) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.
          Length = 2513

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +1

Query: 85   LSWIYNHQAGVLYTRTKENACSRKLIISILGT--VKLDPSQWN 207
            ++ I NHQ      + K N C  K ++ IL T  +KL   QW+
Sbjct: 993  MAGICNHQMAFDTFQNKANVCWAKCLVPILDTAGIKLSDRQWS 1035

>POLN_ONNVG (P13886) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.
          Length = 2514

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +1

Query: 85   LSWIYNHQAGVLYTRTKENACSRKLIISILGT--VKLDPSQWN 207
            ++ I NHQ      + K N C  K ++ IL T  +KL   QW+
Sbjct: 993  MAGICNHQMAFDTFQNKANVCWAKCLVPILDTAGIKLSDRQWS 1035

>FMO3_MOUSE (P97501) Dimethylaniline monooxygenase [N-oxide-forming] 3 (EC|
           1.14.13.8) (Hepatic flavin-containing monooxygenase 3)
           (FMO 3) (Dimethylaniline oxidase 3)
          Length = 534

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = -1

Query: 212 EKFHWLGSSLTVPRMEIINFLEQAFSFVRVYNTPA*WLYIHD-RLSVYV---PC 63
           EKF W G+S T+ + + I ++++  SF+        WL++ D RL+V V   PC
Sbjct: 415 EKFKWYGNSTTI-QTDYIVYMDELASFIGA-KPNLLWLFLKDPRLAVEVFFGPC 466

>PRDM6_HUMAN (Q9NQX0) PR domain zinc finger protein 6 (PR domain-containing|
           protein 6) (Fragment)
          Length = 608

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 233 EAPNHC-LKDKRRIV*PGTGSEAGRPPLAPEWL*PITGIDFRAKSRSIWRCSSLVCG 400
           E P H  L   RR+V   + + A  PP  PEWL        R   R +  C+S V G
Sbjct: 222 ECPMHGPLHSLRRLVGTSSAAAAAPPPELPEWL--------RDLPREVCLCTSTVPG 270

>POLN_CHIK3 (Q5XXP4) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-)
            (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.
          Length = 2474

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +1

Query: 85   LSWIYNHQAGVLYTRTKENACSRKLIISILGT--VKLDPSQWN 207
            ++ I NHQ      + K N C  K ++ IL T  +KL+  QW+
Sbjct: 993  MAGICNHQVTFDTFQNKANVCWAKSLVPILETAGIKLNDRQWS 1035


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,504,355
Number of Sequences: 219361
Number of extensions: 1383792
Number of successful extensions: 2913
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2913
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)