>gb|AC122904.2| Mus musculus BAC clone RP23-46H15 from 1, complete sequence
          Length = 139848

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 388    gctggtgtgtggaaggcttgca 409
              ||||||||||||||||||||||
Sbjct: 120705 gctggtgtgtggaaggcttgca 120684

>gb|AC113597.12| Mus musculus chromosome 1, clone RP23-375F6, complete sequence
          Length = 224996

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 388    gctggtgtgtggaaggcttgca 409
              ||||||||||||||||||||||
Sbjct: 193888 gctggtgtgtggaaggcttgca 193909

>gb|BT017823.1| Zea mays clone EL01N0508B10.c mRNA sequence
          Length = 1099

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 195 gagccaatggaacttctccaggctc 219
           |||||||||||||||||||| ||||
Sbjct: 329 gagccaatggaacttctccaagctc 305

>gb|AC164316.3| Mus musculus BAC clone RP23-16B4 from chromosome 6, complete sequence
          Length = 222892

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     caccgggagaaaataagggtt 21
             |||||||||||||||||||||
Sbjct: 15290 caccgggagaaaataagggtt 15270

>gb|AC011462.4| Homo sapiens chromosome 19 clone CTC-435M10, complete sequence
          Length = 148841

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    atgcttgttctagaaaattaa 160
              |||||||||||||||||||||
Sbjct: 137776 atgcttgttctagaaaattaa 137756

>gb|AC011510.7|AC011510 Homo sapiens chromosome 19 clone CTD-2195B23, complete sequence
          Length = 129402

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 140    atgcttgttctagaaaattaa 160
              |||||||||||||||||||||
Sbjct: 121737 atgcttgttctagaaaattaa 121757

>gb|AC007918.2|F28J9 Arabidopsis thaliana chromosome 1 BAC F28J9 sequence, complete sequence
          Length = 115963

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   ttgttctagaaaattaataat 164
             |||||||||||||||||||||
Sbjct: 75512 ttgttctagaaaattaataat 75492

>gb|AY107916.1| Zea mays PCO138780 mRNA sequence
          Length = 465

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 195 gagccaatggaacttctccaggctc 219
           |||||||||||||||||||| ||||
Sbjct: 212 gagccaatggaacttctccaagctc 188

>gb|AC171502.2| Mus musculus BAC clone RP23-242G4 from chromosome 6, complete sequence
          Length = 209147

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1      caccgggagaaaataagggtt 21
              |||||||||||||||||||||
Sbjct: 158385 caccgggagaaaataagggtt 158365

>gb|AC111620.5| Rattus norvegicus 2 BAC CH230-123K4 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 59971

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   gcttgttctagaaaattaat 161
             ||||||||||||||||||||
Sbjct: 41537 gcttgttctagaaaattaat 41518

>gb|AY596604.1| Saccharum officinarum clone SCRLLR1038D03, complete sequence
          Length = 2630

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 195  gagccaatggaacttctccaggctcgcacaca 226
            |||| ||||||||||||||| |||||| ||||
Sbjct: 2113 gagcaaatggaacttctccaagctcgctcaca 2082

>gb|AC127588.3| Mus musculus BAC clone RP23-106G21 from chromosome 18, complete sequence
          Length = 180320

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     actaggtttccatctcctccatca 48
              |||||||||||||||| |||||||
Sbjct: 138745 actaggtttccatctcatccatca 138768

>gb|AC123531.4| Mus musculus BAC clone RP24-289C11 from chromosome 15, complete
             sequence
          Length = 165766

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    tttccatctcctccatcact 50
             ||||||||||||||||||||
Sbjct: 33496 tttccatctcctccatcact 33477

>gb|AC124675.9| Mus musculus chromosome 15, clone RP24-88M7, complete sequence
          Length = 207904

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    tttccatctcctccatcact 50
             ||||||||||||||||||||
Sbjct: 29648 tttccatctcctccatcact 29667

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 372     tctggcgttgttcttcgctg 391
               ||||||||||||||||||||
Sbjct: 3103019 tctggcgttgttcttcgctg 3103038

>gb|AC155239.2| Mus musculus BAC clone RP24-462F23 from chromosome 14, complete
             sequence
          Length = 170006

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 35    catctcctccatcactgcacaagt 58
             |||||||||||||||||| |||||
Sbjct: 64416 catctcctccatcactgctcaagt 64393

>emb|AL591712.18| Mouse DNA sequence from clone RP23-138C10 on chromosome 2, complete
             sequence
          Length = 168958

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   gctggtgtgtggaaggcttg 407
             ||||||||||||||||||||
Sbjct: 18722 gctggtgtgtggaaggcttg 18703

>gb|AC092112.17| Homo sapiens 12 BAC RP11-134N1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86057

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    tctcctccatcactgcacaa 56
             ||||||||||||||||||||
Sbjct: 35451 tctcctccatcactgcacaa 35470


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,111,623
Number of Sequences: 3902068
Number of extensions: 3111623
Number of successful extensions: 57213
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57175
Number of HSP's gapped (non-prelim): 38
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)